RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 MLECQ14165 292 aa11.86□□□□□ -0.51
SYDE2-201ENST00000234668 DEPDC5O75140 1603 aa11.86□□□□□ -0.51
SYDE2-201ENST00000234668 MYOM1P52179 1685 aa11.85□□□□□ -0.51
SYDE2-201ENST00000234668 INSRP06213 1382 aa11.85□□□□□ -0.51
SYDE2-201ENST00000234668 PPM1GO15355 546 aaPredicted RBP11.85□□□□□ -0.51
SYDE2-201ENST00000234668 TSR2Q969E8 191 aaKnown RBP11.85□□□□□ -0.51
SYDE2-201ENST00000234668 MROH2AA6NES4 1674 aa11.85□□□□□ -0.51
SYDE2-201ENST00000234668 ZNF518AQ6AHZ1 1483 aa11.85□□□□□ -0.51
SYDE2-201ENST00000234668 C8orf34Q49A92 452 aa11.85□□□□□ -0.51
SYDE2-201ENST00000234668 RUNDC1Q96C34 613 aa11.85□□□□□ -0.51
SYDE2-201ENST00000234668 NPC1L1Q9UHC9 1359 aa11.85□□□□□ -0.51
SYDE2-201ENST00000234668 NKTRP30414 1462 aaKnown RBP11.84□□□□□ -0.51
SYDE2-201ENST00000234668 EFCAB6Q5THR3 1501 aa11.84□□□□□ -0.51
SYDE2-201ENST00000234668 ARAP3Q8WWN8 1544 aa11.84□□□□□ -0.51
SYDE2-201ENST00000234668 VGFO15240 615 aaPredicted RBP11.84□□□□□ -0.51
SYDE2-201ENST00000234668 KDM5AP29375 1690 aaKnown RBP11.84□□□□□ -0.51
SYDE2-201ENST00000234668 CGNL1Q0VF96 1302 aa11.83□□□□□ -0.51
SYDE2-201ENST00000234668 POGKQ9P215 609 aa11.83□□□□□ -0.52
SYDE2-201ENST00000234668 SLC24A1O60721 1099 aa11.83□□□□□ -0.52
SYDE2-201ENST00000234668 FAM161AQ3B820 660 aa11.83□□□□□ -0.52
SYDE2-201ENST00000234668 PRAM1Q96QH2 718 aa11.83□□□□□ -0.52
SYDE2-201ENST00000234668 STAG3Q9UJ98 1225 aa11.83□□□□□ -0.52
SYDE2-201ENST00000234668 EVC2Q86UK5 1308 aa11.83□□□□□ -0.52
SYDE2-201ENST00000234668 SEC24BO95487 1268 aa11.82□□□□□ -0.52
SYDE2-201ENST00000234668 RARSP54136 660 aaKnown RBP11.82□□□□□ -0.52
SYDE2-201ENST00000234668 MYOM2P54296 1465 aa11.82□□□□□ -0.52
SYDE2-201ENST00000234668 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.82□□□□□ -0.52
SYDE2-201ENST00000234668 KIF1BO60333 1816 aa11.82□□□□□ -0.52
SYDE2-201ENST00000234668 CFAP53Q96M91 514 aa11.81□□□□□ -0.52
SYDE2-201ENST00000234668 DAXXQ9UER7 740 aaPredicted RBP11.81□□□□□ -0.52
SYDE2-201ENST00000234668 PCDHB15Q9Y5E8 787 aa11.81□□□□□ -0.52
SYDE2-201ENST00000234668 POGZQ7Z3K3 1410 aa11.81□□□□□ -0.52
SYDE2-201ENST00000234668 POLR3AO14802 1390 aaPredicted RBP11.81□□□□□ -0.52
SYDE2-201ENST00000234668 WAPLQ7Z5K2 1190 aa11.8□□□□□ -0.52
SYDE2-201ENST00000234668 YEATS2Q9ULM3 1422 aa11.8□□□□□ -0.52
SYDE2-201ENST00000234668 CABP1Q9NZU7 370 aa11.79□□□□□ -0.52
SYDE2-201ENST00000234668 FRMPD1Q5SYB0 1578 aa11.79□□□□□ -0.52
SYDE2-201ENST00000234668 FYB1O15117 783 aa11.78□□□□□ -0.52
SYDE2-201ENST00000234668 NRXN1Q9ULB1 1477 aa11.78□□□□□ -0.52
SYDE2-201ENST00000234668 ADGRB3O60242 1522 aa11.77□□□□□ -0.52
SYDE2-201ENST00000234668 EXOSC9Q06265 439 aaKnown RBP11.77□□□□□ -0.52
SYDE2-201ENST00000234668 RPGRIP1LQ68CZ1 1315 aa11.77□□□□□ -0.53
SYDE2-201ENST00000234668 PDE3AQ14432 1141 aa11.77□□□□□ -0.53
SYDE2-201ENST00000234668 A0A1W2PP64 1363 aa11.76□□□□□ -0.53
SYDE2-201ENST00000234668 SBNO2Q9Y2G9 1366 aa11.76□□□□□ -0.53
SYDE2-201ENST00000234668 ADGRB1O14514 1584 aa11.76□□□□□ -0.53
SYDE2-201ENST00000234668 FAM69CQ0P6D2 419 aa11.76□□□□□ -0.53
SYDE2-201ENST00000234668 CDK19Q9BWU1 502 aa11.76□□□□□ -0.53
SYDE2-201ENST00000234668 DDRGK1Q96HY6 314 aa11.76□□□□□ -0.53
SYDE2-201ENST00000234668 NCKAP5LQ9HCH0 1330 aa11.75□□□□□ -0.53
SYDE2-201ENST00000234668 ABCC3O15438 1527 aa11.75□□□□□ -0.53
SYDE2-201ENST00000234668 THUMPD2Q9BTF0 503 aaKnown RBP11.75□□□□□ -0.53
SYDE2-201ENST00000234668 MLH3Q9UHC1 1453 aa11.75□□□□□ -0.53
SYDE2-201ENST00000234668 HMOX1P09601 288 aa11.75□□□□□ -0.53
SYDE2-201ENST00000234668 SMC4Q9NTJ3 1288 aa11.75□□□□□ -0.53
SYDE2-201ENST00000234668 ZRANB1Q9UGI0 708 aa11.75□□□□□ -0.53
SYDE2-201ENST00000234668 ELL2O00472 640 aaPredicted RBP11.74□□□□□ -0.53
SYDE2-201ENST00000234668 TMPOP42166 694 aaKnown RBP11.74□□□□□ -0.53
SYDE2-201ENST00000234668 RIPK4P57078 832 aa11.74□□□□□ -0.53
SYDE2-201ENST00000234668 NFKBIBQ15653 356 aa11.74□□□□□ -0.53
SYDE2-201ENST00000234668 PLPPR3Q6T4P5 718 aa11.74□□□□□ -0.53
SYDE2-201ENST00000234668 WDR63Q8IWG1 891 aa11.74□□□□□ -0.53
SYDE2-201ENST00000234668 RTN4Q9NQC3 1192 aaKnown RBP11.74□□□□□ -0.53
SYDE2-201ENST00000234668 PDZRN3Q9UPQ7 1066 aa11.74□□□□□ -0.53
SYDE2-201ENST00000234668 KIAA1210Q9ULL0 1709 aa11.74□□□□□ -0.53
SYDE2-201ENST00000234668 FTSJ3Q8IY81 847 aaKnown RBP11.74□□□□□ -0.53
SYDE2-201ENST00000234668 ANKRD36BQ8N2N9 1353 aa11.74□□□□□ -0.53
SYDE2-201ENST00000234668 SPRYD3Q8NCJ5 442 aa11.73□□□□□ -0.53
SYDE2-201ENST00000234668 TRIM35Q9UPQ4 493 aa11.73□□□□□ -0.53
SYDE2-201ENST00000234668 NUTM2FA1L443 756 aa11.73□□□□□ -0.53
SYDE2-201ENST00000234668 SSH1Q8WYL5 1049 aa11.73□□□□□ -0.53
SYDE2-201ENST00000234668 LMTK2Q8IWU2 1503 aa11.73□□□□□ -0.53
SYDE2-201ENST00000234668 QRICH2Q9H0J4 1663 aa11.73□□□□□ -0.53
SYDE2-201ENST00000234668 MYH16Q9H6N6 1097 aa11.73□□□□□ -0.53
SYDE2-201ENST00000234668 SLC52A1Q9NWF4 448 aa11.73□□□□□ -0.53
SYDE2-201ENST00000234668 MAPK8IP3Q9UPT6 1336 aa11.73□□□□□ -0.53
SYDE2-201ENST00000234668 TULP4Q9NRJ4 1543 aa11.72□□□□□ -0.53
SYDE2-201ENST00000234668 ITPRIPQ8IWB1 547 aa11.72□□□□□ -0.53
SYDE2-201ENST00000234668 SIGLEC1Q9BZZ2 1709 aa11.72□□□□□ -0.53
SYDE2-201ENST00000234668 FRAT2O75474 233 aaPredicted RBP11.72□□□□□ -0.53
SYDE2-201ENST00000234668 SLKQ9H2G2 1235 aaPredicted RBP11.72□□□□□ -0.53
SYDE2-201ENST00000234668 IFT172Q9UG01 1749 aa11.71□□□□□ -0.53
SYDE2-201ENST00000234668 PLEKHF1Q96S99 279 aa11.71□□□□□ -0.53
SYDE2-201ENST00000234668 TERF2IPQ9NYB0 399 aa11.71□□□□□ -0.53
SYDE2-201ENST00000234668 NOB1Q9ULX3 412 aaKnown RBP11.71□□□□□ -0.53
SYDE2-201ENST00000234668 USP19O94966 1318 aa11.71□□□□□ -0.53
SYDE2-201ENST00000234668 NGEFQ8N5V2 710 aa11.71□□□□□ -0.54
SYDE2-201ENST00000234668 IL27Q8NEV9 243 aa11.71□□□□□ -0.54
SYDE2-201ENST00000234668 HECW2Q9P2P5 1572 aa11.71□□□□□ -0.54
SYDE2-201ENST00000234668 DZIP1LQ8IYY4 767 aaKnown RBP11.7□□□□□ -0.54
SYDE2-201ENST00000234668 DIAPH1O60610 1272 aaKnown RBP11.7□□□□□ -0.54
SYDE2-201ENST00000234668 TRIM27P14373 513 aa11.7□□□□□ -0.54
SYDE2-201ENST00000234668 ZKSCAN2Q63HK3 967 aa11.7□□□□□ -0.54
SYDE2-201ENST00000234668 TXNDC2Q86VQ3 553 aa11.7□□□□□ -0.54
SYDE2-201ENST00000234668 GLI2P10070 1586 aa11.7□□□□□ -0.54
SYDE2-201ENST00000234668 HDGFL2Q7Z4V5 671 aaPredicted RBP11.7□□□□□ -0.54
SYDE2-201ENST00000234668 PHACTR3Q96KR7 559 aa11.7□□□□□ -0.54
SYDE2-201ENST00000234668 PPLO60437 1756 aa11.7□□□□□ -0.54
SYDE2-201ENST00000234668 EMILIN1Q9Y6C2 1016 aa11.69□□□□□ -0.54
SYDE2-201ENST00000234668 PRKAR2BP31323 418 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms