RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 PLCB2Q00722 1185 aa13.95□□□□□ -0.18
TTC1-201ENST00000231238 DDX27Q96GQ7 796 aaKnown RBP13.95□□□□□ -0.18
TTC1-201ENST00000231238 RAPGEF3O95398 923 aa13.94□□□□□ -0.18
TTC1-201ENST00000231238 INO80Q9ULG1 1556 aaPredicted RBP13.94□□□□□ -0.18
TTC1-201ENST00000231238 KANK1Q14678 1352 aa13.94□□□□□ -0.18
TTC1-201ENST00000231238 KIF3BO15066 747 aa13.93□□□□□ -0.18
TTC1-201ENST00000231238 PCDHGA4Q9Y5G9 962 aa13.93□□□□□ -0.18
TTC1-201ENST00000231238 TSPOAP1O95153 1857 aa13.92□□□□□ -0.18
TTC1-201ENST00000231238 KDM5DQ9BY66 1539 aa13.92□□□□□ -0.18
TTC1-201ENST00000231238 PTCD2Q8WV60 388 aaKnown RBP13.92□□□□□ -0.18
TTC1-201ENST00000231238 DHX29Q7Z478 1369 aaKnown RBP13.91□□□□□ -0.18
TTC1-201ENST00000231238 HECW2Q9P2P5 1572 aa13.91□□□□□ -0.18
TTC1-201ENST00000231238 ANKRD30BQ9BXX2 1392 aa13.91□□□□□ -0.18
TTC1-201ENST00000231238 FAM135AQ9P2D6 1515 aa13.9□□□□□ -0.18
TTC1-201ENST00000231238 UNC13BO14795 1591 aa13.9□□□□□ -0.18
TTC1-201ENST00000231238 ZNF316A6NFI3 1004 aaPredicted RBP13.9□□□□□ -0.18
TTC1-201ENST00000231238 EMP3P54852 163 aa13.9□□□□□ -0.18
TTC1-201ENST00000231238 MLH3Q9UHC1 1453 aa13.9□□□□□ -0.18
TTC1-201ENST00000231238 A2MP01023 1474 aa13.89□□□□□ -0.19
TTC1-201ENST00000231238 KDM5CP41229 1560 aa13.89□□□□□ -0.19
TTC1-201ENST00000231238 POTEB3A0JP26 581 aa13.88□□□□□ -0.19
TTC1-201ENST00000231238 POTEBQ6S5H4 581 aa13.88□□□□□ -0.19
TTC1-201ENST00000231238 KIDINS220Q9ULH0 1771 aa13.87□□□□□ -0.19
TTC1-201ENST00000231238 PPP1R15AO75807 674 aaPredicted RBP13.87□□□□□ -0.19
TTC1-201ENST00000231238 OXER1Q8TDS5 423 aa13.87□□□□□ -0.19
TTC1-201ENST00000231238 NUDT7P0C024 238 aa13.86□□□□□ -0.19
TTC1-201ENST00000231238 RPRD2Q5VT52 1461 aaKnown RBP13.85□□□□□ -0.19
TTC1-201ENST00000231238 IQGAP3Q86VI3 1631 aa13.85□□□□□ -0.19
TTC1-201ENST00000231238 EIF2AK4Q9P2K8 1649 aaKnown RBP13.85□□□□□ -0.19
TTC1-201ENST00000231238 KDM4FA0A1W2PPD8 638 aa13.85□□□□□ -0.19
TTC1-201ENST00000231238 FAM205CA6NFA0 338 aa13.85□□□□□ -0.19
TTC1-201ENST00000231238 GGT6Q6P531 493 aa13.85□□□□□ -0.19
TTC1-201ENST00000231238 UPF1Q92900 1129 aaKnown RBP eCLIP13.85□□□□□ -0.192e-9■■■■■ 28.4
TTC1-201ENST00000231238 EMILIN3Q9NT22 766 aa13.85□□□□□ -0.19
TTC1-201ENST00000231238 KIF13AQ9H1H9 1805 aa13.84□□□□□ -0.19
TTC1-201ENST00000231238 RICTORQ6R327 1708 aa13.83□□□□□ -0.2
TTC1-201ENST00000231238 MAGI2Q86UL8 1455 aa13.83□□□□□ -0.2
TTC1-201ENST00000231238 L3MBTL2Q969R5 705 aa13.83□□□□□ -0.2
TTC1-201ENST00000231238 CCDC144AA2RUR9 1427 aa13.83□□□□□ -0.2
TTC1-201ENST00000231238 CAMK2BQ13554 666 aa13.82□□□□□ -0.2
TTC1-201ENST00000231238 HS3ST6Q96QI5 342 aa13.82□□□□□ -0.2
TTC1-201ENST00000231238 ABCA6Q8N139 1617 aa13.82□□□□□ -0.2
TTC1-201ENST00000231238 PPRC1Q5VV67 1664 aaKnown RBP13.81□□□□□ -0.2
TTC1-201ENST00000231238 YEATS2Q9ULM3 1422 aa13.8□□□□□ -0.2
TTC1-201ENST00000231238 ZNF326Q5BKZ1 582 aaKnown RBP13.8□□□□□ -0.2
TTC1-201ENST00000231238 DIP2CQ9Y2E4 1556 aa13.79□□□□□ -0.2
TTC1-201ENST00000231238 ERBB3P21860 1342 aa13.79□□□□□ -0.2
TTC1-201ENST00000231238 WASHC2CQ9Y4E1 1318 aa13.79□□□□□ -0.2
TTC1-201ENST00000231238 DEPDC5O75140 1603 aa13.79□□□□□ -0.2
TTC1-201ENST00000231238 PRDM15P57071 1507 aaPredicted RBP13.78□□□□□ -0.2
TTC1-201ENST00000231238 ZMYM4Q5VZL5 1548 aa13.78□□□□□ -0.2
TTC1-201ENST00000231238 FRMPD1Q5SYB0 1578 aa13.78□□□□□ -0.2
TTC1-201ENST00000231238 ATP10AO60312 1499 aa13.76□□□□□ -0.21
TTC1-201ENST00000231238 TBC1D12O60347 775 aa13.76□□□□□ -0.21
TTC1-201ENST00000231238 VARS2Q5ST30 1063 aaKnown RBP13.76□□□□□ -0.21
TTC1-201ENST00000231238 DIEXFQ68CQ4 756 aaKnown RBP13.76□□□□□ -0.21
TTC1-201ENST00000231238 CDAN1Q8IWY9 1227 aa13.76□□□□□ -0.21
TTC1-201ENST00000231238 LHX6Q9UPM6 363 aa13.76□□□□□ -0.21
TTC1-201ENST00000231238 TET3O43151 1660 aa13.76□□□□□ -0.21
TTC1-201ENST00000231238 RGL3Q3MIN7 710 aa13.75□□□□□ -0.21
TTC1-201ENST00000231238 RNF17Q9BXT8 1623 aaKnown RBP13.75□□□□□ -0.21
TTC1-201ENST00000231238 DCAF11Q8TEB1 546 aa13.74□□□□□ -0.21
TTC1-201ENST00000231238 KDM2AQ9Y2K7 1162 aa13.74□□□□□ -0.21
TTC1-201ENST00000231238 ESF1Q9H501 851 aaKnown RBP13.74□□□□□ -0.21
TTC1-201ENST00000231238 WDR70Q9NW82 654 aa13.74□□□□□ -0.21
TTC1-201ENST00000231238 VWDEQ8N2E2 1590 aa13.73□□□□□ -0.21
TTC1-201ENST00000231238 ARID4BQ4LE39 1312 aaPredicted RBP13.72□□□□□ -0.21
TTC1-201ENST00000231238 MROH1Q8NDA8 1641 aa13.72□□□□□ -0.21
TTC1-201ENST00000231238 E9PCH4 1651 aa13.72□□□□□ -0.21
TTC1-201ENST00000231238 HAP1P54257 671 aaPredicted RBP13.72□□□□□ -0.21
TTC1-201ENST00000231238 EFCAB6Q5THR3 1501 aa13.71□□□□□ -0.21
TTC1-201ENST00000231238 MAP3K9P80192 1104 aa13.71□□□□□ -0.21
TTC1-201ENST00000231238 MLECQ14165 292 aa13.71□□□□□ -0.21
TTC1-201ENST00000231238 E2F4Q16254 413 aa13.71□□□□□ -0.21
TTC1-201ENST00000231238 PLA2R1Q13018 1463 aa13.7□□□□□ -0.22
TTC1-201ENST00000231238 COL17A1Q9UMD9 1497 aaPredicted RBP13.7□□□□□ -0.22
TTC1-201ENST00000231238 LMTK2Q8IWU2 1503 aa13.7□□□□□ -0.22
TTC1-201ENST00000231238 CEP152O94986 1710 aa13.7□□□□□ -0.22
TTC1-201ENST00000231238 BCORL1Q5H9F3 1711 aa13.7□□□□□ -0.22
TTC1-201ENST00000231238 EIF4G2P78344 907 aaKnown RBP eCLIP13.69□□□□□ -0.22
TTC1-201ENST00000231238 PCDH10Q9P2E7 1040 aa13.69□□□□□ -0.22
TTC1-201ENST00000231238 ABCC3O15438 1527 aa13.69□□□□□ -0.22
TTC1-201ENST00000231238 TRPM2O94759 1503 aa13.69□□□□□ -0.22
TTC1-201ENST00000231238 ARHGEF40Q8TER5 1519 aa13.69□□□□□ -0.22
TTC1-201ENST00000231238 SPHKAPQ2M3C7 1700 aa13.69□□□□□ -0.22
TTC1-201ENST00000231238 DPYSL4O14531 572 aa13.68□□□□□ -0.22
TTC1-201ENST00000231238 EVI5O60447 810 aa13.68□□□□□ -0.22
TTC1-201ENST00000231238 ANO8Q9HCE9 1232 aaPredicted RBP13.68□□□□□ -0.22
TTC1-201ENST00000231238 NBPF8Q3BBV2 869 aa13.67□□□□□ -0.22
TTC1-201ENST00000231238 HIRIP3Q9BW71 556 aaPredicted RBP13.67□□□□□ -0.22
TTC1-201ENST00000231238 PTPRTO14522 1441 aa13.67□□□□□ -0.22
TTC1-201ENST00000231238 REREQ9P2R6 1566 aa13.67□□□□□ -0.22
TTC1-201ENST00000231238 ZNF687Q8N1G0 1237 aa13.66□□□□□ -0.22
TTC1-201ENST00000231238 ZC3H13Q5T200 1668 aaKnown RBP13.65□□□□□ -0.22
TTC1-201ENST00000231238 AGLP35573 1532 aa13.65□□□□□ -0.22
TTC1-201ENST00000231238 NPATQ14207 1427 aa13.65□□□□□ -0.22
TTC1-201ENST00000231238 KRTAP3-3Q9BYR6 98 aa13.65□□□□□ -0.22
TTC1-201ENST00000231238 KRTAP3-2Q9BYR7 98 aa13.65□□□□□ -0.22
TTC1-201ENST00000231238 HSPA5P11021 654 aaKnown RBP13.64□□□□□ -0.23
TTC1-201ENST00000231238 CAMSAP1Q5T5Y3 1602 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms