RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 TRPM1Q7Z4N2 1603 aa20.62■□□□□ 0.89
SUPT4H1-201ENST00000225504 POGKQ9P215 609 aa20.61■□□□□ 0.89
SUPT4H1-201ENST00000225504 CADPS2Q86UW7 1296 aa20.6■□□□□ 0.89
SUPT4H1-201ENST00000225504 TIMELESSQ9UNS1 1208 aa20.59■□□□□ 0.89
SUPT4H1-201ENST00000225504 DLC1Q96QB1 1528 aa20.59■□□□□ 0.89
SUPT4H1-201ENST00000225504 ROCK2O75116 1388 aaKnown RBP20.57■□□□□ 0.88
SUPT4H1-201ENST00000225504 HIRIP3Q9BW71 556 aaPredicted RBP20.56■□□□□ 0.88
SUPT4H1-201ENST00000225504 MINK1Q8N4C8 1332 aaPredicted RBP20.55■□□□□ 0.88
SUPT4H1-201ENST00000225504 DCCP43146 1447 aa20.55■□□□□ 0.88
SUPT4H1-201ENST00000225504 MST1RQ04912 1400 aa20.54■□□□□ 0.88
SUPT4H1-201ENST00000225504 ARHGEF28Q8N1W1 1705 aaKnown RBP20.54■□□□□ 0.88
SUPT4H1-201ENST00000225504 NUTM2FA1L443 756 aa20.54■□□□□ 0.88
SUPT4H1-201ENST00000225504 HSPA1LP34931 641 aa20.53■□□□□ 0.88
SUPT4H1-201ENST00000225504 CARD11Q9BXL7 1154 aa20.52■□□□□ 0.88
SUPT4H1-201ENST00000225504 GPRASP1Q5JY77 1395 aa20.52■□□□□ 0.88
SUPT4H1-201ENST00000225504 RALGAPBQ86X10 1494 aa20.51■□□□□ 0.87
SUPT4H1-201ENST00000225504 BRINP3Q76B58 766 aa20.5■□□□□ 0.87
SUPT4H1-201ENST00000225504 ORAI2Q96SN7 254 aa20.5■□□□□ 0.87
SUPT4H1-201ENST00000225504 ROBO1Q9Y6N7 1651 aa20.5■□□□□ 0.87
SUPT4H1-201ENST00000225504 C1orf167Q5SNV9 1468 aa20.49■□□□□ 0.87
SUPT4H1-201ENST00000225504 CDC42BPGQ6DT37 1551 aa20.48■□□□□ 0.87
SUPT4H1-201ENST00000225504 CENPJQ9HC77 1338 aaPredicted RBP20.48■□□□□ 0.87
SUPT4H1-201ENST00000225504 WASLO00401 505 aaPredicted RBP20.46■□□□□ 0.87
SUPT4H1-201ENST00000225504 DDX17Q92841 729 aaKnown RBP20.46■□□□□ 0.87
SUPT4H1-201ENST00000225504 FMN2Q9NZ56 1722 aa20.45■□□□□ 0.86
SUPT4H1-201ENST00000225504 ESCO1Q5FWF5 840 aa20.44■□□□□ 0.86
SUPT4H1-201ENST00000225504 CDK19Q9BWU1 502 aa20.43■□□□□ 0.86
SUPT4H1-201ENST00000225504 PRR36Q9H6K5 1346 aa20.43■□□□□ 0.86
SUPT4H1-201ENST00000225504 RGPD8O14715 1765 aaPredicted RBP20.43■□□□□ 0.86
SUPT4H1-201ENST00000225504 ADGRB2O60241 1585 aa20.43■□□□□ 0.86
SUPT4H1-201ENST00000225504 QRICH2Q9H0J4 1663 aa20.41■□□□□ 0.86
SUPT4H1-201ENST00000225504 USP32Q8NFA0 1604 aa20.39■□□□□ 0.86
SUPT4H1-201ENST00000225504 EIF3AQ14152 1382 aaKnown RBP20.38■□□□□ 0.85
SUPT4H1-201ENST00000225504 ST20-MTHFSA0A0A6YYL1 179 aa20.38■□□□□ 0.85
SUPT4H1-201ENST00000225504 FOXO3O43524 673 aa20.37■□□□□ 0.85
SUPT4H1-201ENST00000225504 NUDT16Q96DE0 195 aaKnown RBP20.37■□□□□ 0.85
SUPT4H1-201ENST00000225504 CABP2Q9NPB3 220 aa20.37■□□□□ 0.85
SUPT4H1-201ENST00000225504 PHF8Q9UPP1 1060 aa20.37■□□□□ 0.85
SUPT4H1-201ENST00000225504 PHLPP1O60346 1717 aa20.36■□□□□ 0.85
SUPT4H1-201ENST00000225504 XPCQ01831 940 aaPredicted RBP20.36■□□□□ 0.85
SUPT4H1-201ENST00000225504 PMFBP1Q8TBY8 1022 aa20.36■□□□□ 0.85
SUPT4H1-201ENST00000225504 ANKARQ7Z5J8 1434 aa20.35■□□□□ 0.85
SUPT4H1-201ENST00000225504 SRPK2P78362 688 aaKnown RBP20.35■□□□□ 0.85
SUPT4H1-201ENST00000225504 TESK2Q96S53 571 aa20.35■□□□□ 0.85
SUPT4H1-201ENST00000225504 AHDC1Q5TGY3 1603 aaPredicted RBP20.35■□□□□ 0.85
SUPT4H1-201ENST00000225504 TULP4Q9NRJ4 1543 aa20.34■□□□□ 0.85
SUPT4H1-201ENST00000225504 USP47Q96K76 1375 aa20.34■□□□□ 0.85
SUPT4H1-201ENST00000225504 NHSL1Q5SYE7 1610 aa20.33■□□□□ 0.85
SUPT4H1-201ENST00000225504 COL16A1Q07092 1604 aaPredicted RBP20.33■□□□□ 0.84
SUPT4H1-201ENST00000225504 EVC2Q86UK5 1308 aa20.32■□□□□ 0.84
SUPT4H1-201ENST00000225504 ATP7BP35670 1465 aa20.32■□□□□ 0.84
SUPT4H1-201ENST00000225504 SOS2Q07890 1332 aaPredicted RBP20.31■□□□□ 0.84
SUPT4H1-201ENST00000225504 CCDC61Q9Y6R9 512 aa20.3■□□□□ 0.84
SUPT4H1-201ENST00000225504 KRT28Q7Z3Y7 464 aa20.3■□□□□ 0.84
SUPT4H1-201ENST00000225504 SBNO2Q9Y2G9 1366 aa20.3■□□□□ 0.84
SUPT4H1-201ENST00000225504 NPHP3Q7Z494 1330 aa20.29■□□□□ 0.84
SUPT4H1-201ENST00000225504 PSME1Q06323 249 aa20.27■□□□□ 0.84
SUPT4H1-201ENST00000225504 LRRC59Q96AG4 307 aaKnown RBP20.27■□□□□ 0.84
SUPT4H1-201ENST00000225504 CABP1Q9NZU7 370 aa20.27■□□□□ 0.84
SUPT4H1-201ENST00000225504 KIF1AQ12756 1690 aa20.27■□□□□ 0.83
SUPT4H1-201ENST00000225504 PXDNQ92626 1479 aa20.26■□□□□ 0.83
SUPT4H1-201ENST00000225504 PLEKHG3A1L390 1219 aa20.26■□□□□ 0.83
SUPT4H1-201ENST00000225504 HSPA5P11021 654 aaKnown RBP20.26■□□□□ 0.83
SUPT4H1-201ENST00000225504 NGDNQ8NEJ9 315 aaKnown RBP20.26■□□□□ 0.83
SUPT4H1-201ENST00000225504 JCADQ9P266 1359 aa20.25■□□□□ 0.83
SUPT4H1-201ENST00000225504 ACEP12821 1306 aa20.25■□□□□ 0.83
SUPT4H1-201ENST00000225504 PPIP5K1Q6PFW1 1433 aa20.24■□□□□ 0.83
SUPT4H1-201ENST00000225504 EIF4G2P78344 907 aaKnown RBP eCLIP20.24■□□□□ 0.83
SUPT4H1-201ENST00000225504 TOPAZ1Q8N9V7 1692 aa20.23■□□□□ 0.83
SUPT4H1-201ENST00000225504 DISP3Q9P2K9 1392 aa20.22■□□□□ 0.83
SUPT4H1-201ENST00000225504 ITSN1Q15811 1721 aa20.22■□□□□ 0.83
SUPT4H1-201ENST00000225504 PNPLA6Q8IY17 1366 aa20.21■□□□□ 0.83
SUPT4H1-201ENST00000225504 SPATA31A3Q5VYP0 1347 aa20.2■□□□□ 0.82
SUPT4H1-201ENST00000225504 POLR3AO14802 1390 aaPredicted RBP20.2■□□□□ 0.82
SUPT4H1-201ENST00000225504 TMF1P82094 1093 aa20.19■□□□□ 0.82
SUPT4H1-201ENST00000225504 SLC12A5Q9H2X9 1139 aa20.19■□□□□ 0.82
SUPT4H1-201ENST00000225504 NUTM2BA6NNL0 878 aaPredicted RBP20.18■□□□□ 0.82
SUPT4H1-201ENST00000225504 NUTM2EB1AL46 878 aaPredicted RBP20.18■□□□□ 0.82
SUPT4H1-201ENST00000225504 NUTM2AQ8IVF1 878 aaPredicted RBP20.18■□□□□ 0.82
SUPT4H1-201ENST00000225504 LMOD2Q6P5Q4 547 aa20.18■□□□□ 0.82
SUPT4H1-201ENST00000225504 TMC1Q8TDI8 760 aa20.18■□□□□ 0.82
SUPT4H1-201ENST00000225504 PUS7Q96PZ0 661 aaKnown RBP20.18■□□□□ 0.82
SUPT4H1-201ENST00000225504 ATAD2Q6PL18 1390 aa20.17■□□□□ 0.82
SUPT4H1-201ENST00000225504 SHPRHQ149N8 1683 aa20.17■□□□□ 0.82
SUPT4H1-201ENST00000225504 SBNO1A3KN83 1393 aa20.17■□□□□ 0.82
SUPT4H1-201ENST00000225504 SLC24A1O60721 1099 aa20.17■□□□□ 0.82
SUPT4H1-201ENST00000225504 PAK3O75914 559 aaPredicted RBP20.17■□□□□ 0.82
SUPT4H1-201ENST00000225504 PLEKHG5O94827 1062 aa20.16■□□□□ 0.82
SUPT4H1-201ENST00000225504 TRPM3Q9HCF6 1732 aaPredicted RBP20.15■□□□□ 0.82
SUPT4H1-201ENST00000225504 SPATA31A6Q5VVP1 1343 aa20.15■□□□□ 0.82
SUPT4H1-201ENST00000225504 C11orf95C9JLR9 678 aaPredicted RBP20.14■□□□□ 0.81
SUPT4H1-201ENST00000225504 CABLES1Q8TDN4 633 aa20.14■□□□□ 0.81
SUPT4H1-201ENST00000225504 LRP6O75581 1613 aa20.14■□□□□ 0.81
SUPT4H1-201ENST00000225504 TNS3Q68CZ2 1445 aa20.13■□□□□ 0.81
SUPT4H1-201ENST00000225504 MED1Q15648 1581 aaPredicted RBP20.13■□□□□ 0.81
SUPT4H1-201ENST00000225504 CPSF1Q10570 1443 aaKnown RBP20.12■□□□□ 0.81
SUPT4H1-201ENST00000225504 NUTM2GQ5VZR2 741 aa20.11■□□□□ 0.81
SUPT4H1-201ENST00000225504 CD163L1Q9NR16 1453 aa20.11■□□□□ 0.81
SUPT4H1-201ENST00000225504 ZNF692Q9BU19 519 aaPredicted RBP20.11■□□□□ 0.81
SUPT4H1-201ENST00000225504 USP6P35125 1406 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms