RNA–Protein interactions for RNA: ENST00000223061.5

PCOLCE-201, Transcript of procollagen C-endopeptidase enhancer, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOLCE, Length 1,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-201ENST00000223061 NALCNQ8IZF0 1738 aa21.02■□□□□ 0.95
PCOLCE-201ENST00000223061 KIAA1210Q9ULL0 1709 aa21.02■□□□□ 0.95
PCOLCE-201ENST00000223061 DCCP43146 1447 aa21.01■□□□□ 0.95
PCOLCE-201ENST00000223061 DLC1Q96QB1 1528 aa21■□□□□ 0.95
PCOLCE-201ENST00000223061 ROCK2O75116 1388 aaKnown RBP20.99■□□□□ 0.95
PCOLCE-201ENST00000223061 TRPM1Q7Z4N2 1603 aa20.97■□□□□ 0.95
PCOLCE-201ENST00000223061 MST1RQ04912 1400 aa20.96■□□□□ 0.95
PCOLCE-201ENST00000223061 HSPA1LP34931 641 aa20.95■□□□□ 0.94
PCOLCE-201ENST00000223061 TIMELESSQ9UNS1 1208 aa20.95■□□□□ 0.94
PCOLCE-201ENST00000223061 MINK1Q8N4C8 1332 aaPredicted RBP20.94■□□□□ 0.94
PCOLCE-201ENST00000223061 HIRIP3Q9BW71 556 aaPredicted RBP20.93■□□□□ 0.94
PCOLCE-201ENST00000223061 NUTM2FA1L443 756 aa20.92■□□□□ 0.94
PCOLCE-201ENST00000223061 CDC42BPGQ6DT37 1551 aa20.92■□□□□ 0.94
PCOLCE-201ENST00000223061 ROBO1Q9Y6N7 1651 aa20.92■□□□□ 0.94
PCOLCE-201ENST00000223061 RALGAPBQ86X10 1494 aa20.92■□□□□ 0.94
PCOLCE-201ENST00000223061 ARHGEF28Q8N1W1 1705 aaKnown RBP20.91■□□□□ 0.94
PCOLCE-201ENST00000223061 CARD11Q9BXL7 1154 aa20.91■□□□□ 0.94
PCOLCE-201ENST00000223061 C1orf167Q5SNV9 1468 aa20.91■□□□□ 0.94
PCOLCE-201ENST00000223061 BRINP3Q76B58 766 aa20.9■□□□□ 0.94
PCOLCE-201ENST00000223061 GPRASP1Q5JY77 1395 aa20.9■□□□□ 0.94
PCOLCE-201ENST00000223061 CENPJQ9HC77 1338 aaPredicted RBP20.88■□□□□ 0.93
PCOLCE-201ENST00000223061 ORAI2Q96SN7 254 aa20.87■□□□□ 0.93
PCOLCE-201ENST00000223061 ESCO1Q5FWF5 840 aa20.85■□□□□ 0.93
PCOLCE-201ENST00000223061 ADGRB2O60241 1585 aa20.85■□□□□ 0.93
PCOLCE-201ENST00000223061 WASLO00401 505 aaPredicted RBP20.84■□□□□ 0.93
PCOLCE-201ENST00000223061 EIF3AQ14152 1382 aaKnown RBP20.84■□□□□ 0.93
PCOLCE-201ENST00000223061 FMN2Q9NZ56 1722 aa20.83■□□□□ 0.93
PCOLCE-201ENST00000223061 DDX17Q92841 729 aaKnown RBP20.83■□□□□ 0.92
PCOLCE-201ENST00000223061 CDK19Q9BWU1 502 aa20.8■□□□□ 0.92
PCOLCE-201ENST00000223061 QRICH2Q9H0J4 1663 aa20.78■□□□□ 0.92
PCOLCE-201ENST00000223061 PRR36Q9H6K5 1346 aa20.78■□□□□ 0.92
PCOLCE-201ENST00000223061 AHDC1Q5TGY3 1603 aaPredicted RBP20.78■□□□□ 0.92
PCOLCE-201ENST00000223061 ANKARQ7Z5J8 1434 aa20.78■□□□□ 0.92
PCOLCE-201ENST00000223061 PHLPP1O60346 1717 aa20.78■□□□□ 0.92
PCOLCE-201ENST00000223061 TULP4Q9NRJ4 1543 aa20.77■□□□□ 0.92
PCOLCE-201ENST00000223061 FOXO3O43524 673 aa20.76■□□□□ 0.91
PCOLCE-201ENST00000223061 SRPK2P78362 688 aaKnown RBP20.76■□□□□ 0.91
PCOLCE-201ENST00000223061 PHF8Q9UPP1 1060 aa20.76■□□□□ 0.91
PCOLCE-201ENST00000223061 USP32Q8NFA0 1604 aa20.75■□□□□ 0.91
PCOLCE-201ENST00000223061 NUDT16Q96DE0 195 aaKnown RBP20.75■□□□□ 0.91
PCOLCE-201ENST00000223061 XPCQ01831 940 aaPredicted RBP20.74■□□□□ 0.91
PCOLCE-201ENST00000223061 PMFBP1Q8TBY8 1022 aa20.74■□□□□ 0.91
PCOLCE-201ENST00000223061 CABP2Q9NPB3 220 aa20.74■□□□□ 0.91
PCOLCE-201ENST00000223061 COL16A1Q07092 1604 aaPredicted RBP20.74■□□□□ 0.91
PCOLCE-201ENST00000223061 NHSL1Q5SYE7 1610 aa20.73■□□□□ 0.91
PCOLCE-201ENST00000223061 NPHP3Q7Z494 1330 aa20.73■□□□□ 0.91
PCOLCE-201ENST00000223061 EVC2Q86UK5 1308 aa20.73■□□□□ 0.91
PCOLCE-201ENST00000223061 USP47Q96K76 1375 aa20.73■□□□□ 0.91
PCOLCE-201ENST00000223061 ATP7BP35670 1465 aa20.73■□□□□ 0.91
PCOLCE-201ENST00000223061 ST20-MTHFSA0A0A6YYL1 179 aa20.73■□□□□ 0.91
PCOLCE-201ENST00000223061 RGPD8O14715 1765 aaPredicted RBP20.71■□□□□ 0.91
PCOLCE-201ENST00000223061 SOS2Q07890 1332 aaPredicted RBP20.7■□□□□ 0.9
PCOLCE-201ENST00000223061 JCADQ9P266 1359 aa20.7■□□□□ 0.9
PCOLCE-201ENST00000223061 SBNO2Q9Y2G9 1366 aa20.7■□□□□ 0.9
PCOLCE-201ENST00000223061 KIF1AQ12756 1690 aa20.69■□□□□ 0.9
PCOLCE-201ENST00000223061 LRRC59Q96AG4 307 aaKnown RBP20.69■□□□□ 0.9
PCOLCE-201ENST00000223061 CCDC61Q9Y6R9 512 aa20.69■□□□□ 0.9
PCOLCE-201ENST00000223061 PXDNQ92626 1479 aa20.68■□□□□ 0.9
PCOLCE-201ENST00000223061 PSME1Q06323 249 aa20.67■□□□□ 0.9
PCOLCE-201ENST00000223061 KRT28Q7Z3Y7 464 aa20.67■□□□□ 0.9
PCOLCE-201ENST00000223061 NGDNQ8NEJ9 315 aaKnown RBP20.67■□□□□ 0.9
PCOLCE-201ENST00000223061 TESK2Q96S53 571 aa20.67■□□□□ 0.9
PCOLCE-201ENST00000223061 PPIP5K1Q6PFW1 1433 aa20.65■□□□□ 0.9
PCOLCE-201ENST00000223061 CABP1Q9NZU7 370 aa20.63■□□□□ 0.89
PCOLCE-201ENST00000223061 ITSN1Q15811 1721 aa20.62■□□□□ 0.89
PCOLCE-201ENST00000223061 PNPLA6Q8IY17 1366 aa20.62■□□□□ 0.89
PCOLCE-201ENST00000223061 PLEKHG3A1L390 1219 aa20.62■□□□□ 0.89
PCOLCE-201ENST00000223061 TOPAZ1Q8N9V7 1692 aa20.62■□□□□ 0.89
PCOLCE-201ENST00000223061 ACEP12821 1306 aa20.62■□□□□ 0.89
PCOLCE-201ENST00000223061 ATAD2Q6PL18 1390 aa20.61■□□□□ 0.89
PCOLCE-201ENST00000223061 EIF4G2P78344 907 aaKnown RBP eCLIP20.61■□□□□ 0.89
PCOLCE-201ENST00000223061 NUTM2BA6NNL0 878 aaPredicted RBP20.6■□□□□ 0.89
PCOLCE-201ENST00000223061 NUTM2EB1AL46 878 aaPredicted RBP20.6■□□□□ 0.89
PCOLCE-201ENST00000223061 NUTM2AQ8IVF1 878 aaPredicted RBP20.6■□□□□ 0.89
PCOLCE-201ENST00000223061 SPATA31A6Q5VVP1 1343 aa20.6■□□□□ 0.89
PCOLCE-201ENST00000223061 SPATA31A3Q5VYP0 1347 aa20.6■□□□□ 0.89
PCOLCE-201ENST00000223061 SLC24A1O60721 1099 aa20.59■□□□□ 0.89
PCOLCE-201ENST00000223061 LMOD2Q6P5Q4 547 aa20.59■□□□□ 0.89
PCOLCE-201ENST00000223061 POLR3AO14802 1390 aaPredicted RBP20.59■□□□□ 0.89
PCOLCE-201ENST00000223061 SHPRHQ149N8 1683 aa20.59■□□□□ 0.89
PCOLCE-201ENST00000223061 HSPA5P11021 654 aaKnown RBP20.58■□□□□ 0.89
PCOLCE-201ENST00000223061 TMF1P82094 1093 aa20.58■□□□□ 0.89
PCOLCE-201ENST00000223061 MED1Q15648 1581 aaPredicted RBP20.58■□□□□ 0.89
PCOLCE-201ENST00000223061 SBNO1A3KN83 1393 aa20.58■□□□□ 0.89
PCOLCE-201ENST00000223061 DISP3Q9P2K9 1392 aa20.58■□□□□ 0.89
PCOLCE-201ENST00000223061 PAK3O75914 559 aaPredicted RBP20.58■□□□□ 0.88
PCOLCE-201ENST00000223061 TNS3Q68CZ2 1445 aa20.57■□□□□ 0.88
PCOLCE-201ENST00000223061 TMC1Q8TDI8 760 aa20.57■□□□□ 0.88
PCOLCE-201ENST00000223061 PLEKHG5O94827 1062 aa20.56■□□□□ 0.88
PCOLCE-201ENST00000223061 LRP6O75581 1613 aa20.55■□□□□ 0.88
PCOLCE-201ENST00000223061 MEX3CQ5U5Q3 659 aaKnown RBP20.54■□□□□ 0.88
PCOLCE-201ENST00000223061 PUS7Q96PZ0 661 aaKnown RBP20.53■□□□□ 0.88
PCOLCE-201ENST00000223061 ARHGEF10O15013 1369 aa20.53■□□□□ 0.88
PCOLCE-201ENST00000223061 SLC12A5Q9H2X9 1139 aa20.53■□□□□ 0.88
PCOLCE-201ENST00000223061 TRPM3Q9HCF6 1732 aaPredicted RBP20.52■□□□□ 0.88
PCOLCE-201ENST00000223061 PHF23Q9BUL5 403 aaPredicted RBP20.52■□□□□ 0.88
PCOLCE-201ENST00000223061 ADAMTS2O95450 1211 aa20.51■□□□□ 0.87
PCOLCE-201ENST00000223061 CDCA8Q53HL2 280 aa20.51■□□□□ 0.87
PCOLCE-201ENST00000223061 CABLES1Q8TDN4 633 aa20.5■□□□□ 0.87
PCOLCE-201ENST00000223061 USP6P35125 1406 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms