RNA–Protein interactions for RNA: ENST00000217999.2

RHOXF1-201, Transcript of Rhox homeobox family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHOXF1, Length 769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF1-201ENST00000217999 TMEM132EQ6IEE7 984 aa20.98■□□□□ 0.95
RHOXF1-201ENST00000217999 C14orf93Q9H972 538 aaKnown RBP20.98■□□□□ 0.95
RHOXF1-201ENST00000217999 STAC3Q96MF2 364 aa20.96■□□□□ 0.95
RHOXF1-201ENST00000217999 FMN2Q9NZ56 1722 aa20.95■□□□□ 0.94
RHOXF1-201ENST00000217999 DLC1Q96QB1 1528 aa20.95■□□□□ 0.94
RHOXF1-201ENST00000217999 KIF1AQ12756 1690 aa20.95■□□□□ 0.94
RHOXF1-201ENST00000217999 PNPLA6Q8IY17 1366 aa20.95■□□□□ 0.94
RHOXF1-201ENST00000217999 ZNF772Q68DY9 489 aaPredicted RBP20.94■□□□□ 0.94
RHOXF1-201ENST00000217999 WAPLQ7Z5K2 1190 aa20.94■□□□□ 0.94
RHOXF1-201ENST00000217999 NPHP3Q7Z494 1330 aa20.94■□□□□ 0.94
RHOXF1-201ENST00000217999 NUTM2BA6NNL0 878 aaPredicted RBP20.93■□□□□ 0.94
RHOXF1-201ENST00000217999 NUTM2EB1AL46 878 aaPredicted RBP20.93■□□□□ 0.94
RHOXF1-201ENST00000217999 CFAP70Q5T0N1 1121 aa20.93■□□□□ 0.94
RHOXF1-201ENST00000217999 NUTM2AQ8IVF1 878 aaPredicted RBP20.93■□□□□ 0.94
RHOXF1-201ENST00000217999 SIRT1Q96EB6 747 aa20.93■□□□□ 0.94
RHOXF1-201ENST00000217999 ORAI2Q96SN7 254 aa20.93■□□□□ 0.94
RHOXF1-201ENST00000217999 ESCO1Q5FWF5 840 aa20.92■□□□□ 0.94
RHOXF1-201ENST00000217999 DDX17Q92841 729 aaKnown RBP20.92■□□□□ 0.94
RHOXF1-201ENST00000217999 PLEKHH1Q9ULM0 1364 aa20.92■□□□□ 0.94
RHOXF1-201ENST00000217999 SOS2Q07890 1332 aaPredicted RBP20.91■□□□□ 0.94
RHOXF1-201ENST00000217999 POTEAQ6S8J7 498 aa20.91■□□□□ 0.94
RHOXF1-201ENST00000217999 DCAF11Q8TEB1 546 aa20.91■□□□□ 0.94
RHOXF1-201ENST00000217999 ADGRB1O14514 1584 aa20.9■□□□□ 0.94
RHOXF1-201ENST00000217999 COL22A1Q8NFW1 1626 aaPredicted RBP20.89■□□□□ 0.93
RHOXF1-201ENST00000217999 ADGRB2O60241 1585 aa20.89■□□□□ 0.93
RHOXF1-201ENST00000217999 KDM2AQ9Y2K7 1162 aa20.88■□□□□ 0.93
RHOXF1-201ENST00000217999 POGKQ9P215 609 aa20.87■□□□□ 0.93
RHOXF1-201ENST00000217999 PXDNQ92626 1479 aa20.87■□□□□ 0.93
RHOXF1-201ENST00000217999 PRAM1Q96QH2 718 aa20.86■□□□□ 0.93
RHOXF1-201ENST00000217999 EIF3AQ14152 1382 aaKnown RBP20.85■□□□□ 0.93
RHOXF1-201ENST00000217999 NUTM2FA1L443 756 aa20.85■□□□□ 0.93
RHOXF1-201ENST00000217999 AFF2P51816 1311 aa20.83■□□□□ 0.93
RHOXF1-201ENST00000217999 SAFB2Q14151 953 aaKnown RBP eCLIP20.83■□□□□ 0.93
RHOXF1-201ENST00000217999 ANKARQ7Z5J8 1434 aa20.83■□□□□ 0.93
RHOXF1-201ENST00000217999 KIAA1210Q9ULL0 1709 aa20.82■□□□□ 0.92
RHOXF1-201ENST00000217999 FOXO3O43524 673 aa20.82■□□□□ 0.92
RHOXF1-201ENST00000217999 C8orf37Q96NL8 207 aa20.82■□□□□ 0.92
RHOXF1-201ENST00000217999 ARHGEF28Q8N1W1 1705 aaKnown RBP20.81■□□□□ 0.92
RHOXF1-201ENST00000217999 TRAK1Q9UPV9 953 aa20.8■□□□□ 0.92
RHOXF1-201ENST00000217999 CDK12Q9NYV4 1490 aaPredicted RBP20.79■□□□□ 0.92
RHOXF1-201ENST00000217999 RGPD8O14715 1765 aaPredicted RBP20.79■□□□□ 0.92
RHOXF1-201ENST00000217999 ADAMTS2O95450 1211 aa20.78■□□□□ 0.92
RHOXF1-201ENST00000217999 TULP4Q9NRJ4 1543 aa20.78■□□□□ 0.92
RHOXF1-201ENST00000217999 RXRBP28702 533 aa20.77■□□□□ 0.92
RHOXF1-201ENST00000217999 XPCQ01831 940 aaPredicted RBP20.77■□□□□ 0.92
RHOXF1-201ENST00000217999 NGLY1Q96IV0 654 aa20.77■□□□□ 0.92
RHOXF1-201ENST00000217999 PHF8Q9UPP1 1060 aa20.77■□□□□ 0.92
RHOXF1-201ENST00000217999 MARF1Q9Y4F3 1742 aaKnown RBP20.77■□□□□ 0.92
RHOXF1-201ENST00000217999 TNS3Q68CZ2 1445 aa20.76■□□□□ 0.91
RHOXF1-201ENST00000217999 USP32Q8NFA0 1604 aa20.75■□□□□ 0.91
RHOXF1-201ENST00000217999 PSME1Q06323 249 aa20.75■□□□□ 0.91
RHOXF1-201ENST00000217999 ITSN1Q15811 1721 aa20.75■□□□□ 0.91
RHOXF1-201ENST00000217999 MINK1Q8N4C8 1332 aaPredicted RBP20.75■□□□□ 0.91
RHOXF1-201ENST00000217999 SPATA31A3Q5VYP0 1347 aa20.73■□□□□ 0.91
RHOXF1-201ENST00000217999 KRT28Q7Z3Y7 464 aa20.72■□□□□ 0.91
RHOXF1-201ENST00000217999 HIRIP3Q9BW71 556 aaPredicted RBP20.72■□□□□ 0.91
RHOXF1-201ENST00000217999 SBNO1A3KN83 1393 aa20.72■□□□□ 0.91
RHOXF1-201ENST00000217999 ARHGEF10O15013 1369 aa20.72■□□□□ 0.91
RHOXF1-201ENST00000217999 HAP1P54257 671 aaPredicted RBP20.7■□□□□ 0.9
RHOXF1-201ENST00000217999 RBM6P78332 1123 aaKnown RBP20.7■□□□□ 0.9
RHOXF1-201ENST00000217999 QTRT2Q9H974 415 aaKnown RBP20.7■□□□□ 0.9
RHOXF1-201ENST00000217999 USP21Q9UK80 565 aa20.7■□□□□ 0.9
RHOXF1-201ENST00000217999 GPRASP1Q5JY77 1395 aa20.7■□□□□ 0.9
RHOXF1-201ENST00000217999 WASLO00401 505 aaPredicted RBP20.69■□□□□ 0.9
RHOXF1-201ENST00000217999 TRPC5Q9UL62 973 aaPredicted RBP20.68■□□□□ 0.9
RHOXF1-201ENST00000217999 ABCA3Q99758 1704 aa20.67■□□□□ 0.9
RHOXF1-201ENST00000217999 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.67■□□□□ 0.9
RHOXF1-201ENST00000217999 FNBP4Q8N3X1 1017 aaPredicted RBP20.66■□□□□ 0.9
RHOXF1-201ENST00000217999 RGS12O14924 1447 aa20.66■□□□□ 0.9
RHOXF1-201ENST00000217999 TRPM3Q9HCF6 1732 aaPredicted RBP20.65■□□□□ 0.9
RHOXF1-201ENST00000217999 ATP7BP35670 1465 aa20.65■□□□□ 0.9
RHOXF1-201ENST00000217999 LMOD2Q6P5Q4 547 aa20.65■□□□□ 0.9
RHOXF1-201ENST00000217999 PMFBP1Q8TBY8 1022 aa20.65■□□□□ 0.9
RHOXF1-201ENST00000217999 ATRNO75882 1429 aa20.64■□□□□ 0.89
RHOXF1-201ENST00000217999 TOPAZ1Q8N9V7 1692 aa20.63■□□□□ 0.89
RHOXF1-201ENST00000217999 PRR36Q9H6K5 1346 aa20.62■□□□□ 0.89
RHOXF1-201ENST00000217999 ALS2Q96Q42 1657 aa20.62■□□□□ 0.89
RHOXF1-201ENST00000217999 QRICH2Q9H0J4 1663 aa20.62■□□□□ 0.89
RHOXF1-201ENST00000217999 NGDNQ8NEJ9 315 aaKnown RBP20.62■□□□□ 0.89
RHOXF1-201ENST00000217999 TRPM1Q7Z4N2 1603 aa20.61■□□□□ 0.89
RHOXF1-201ENST00000217999 L3MBTL2Q969R5 705 aa20.6■□□□□ 0.89
RHOXF1-201ENST00000217999 NWD2Q9ULI1 1742 aa20.6■□□□□ 0.89
RHOXF1-201ENST00000217999 PLCH1Q4KWH8 1693 aa20.6■□□□□ 0.89
RHOXF1-201ENST00000217999 CENPJQ9HC77 1338 aaPredicted RBP20.59■□□□□ 0.89
RHOXF1-201ENST00000217999 SLIT2O94813 1529 aa20.59■□□□□ 0.89
RHOXF1-201ENST00000217999 BCL9LQ86UU0 1499 aa20.59■□□□□ 0.89
RHOXF1-201ENST00000217999 NEUROD1Q13562 356 aa20.58■□□□□ 0.89
RHOXF1-201ENST00000217999 NBPF1Q3BBV0 1214 aa20.58■□□□□ 0.89
RHOXF1-201ENST00000217999 NUDT16Q96DE0 195 aaKnown RBP20.58■□□□□ 0.89
RHOXF1-201ENST00000217999 CDK19Q9BWU1 502 aa20.57■□□□□ 0.88
RHOXF1-201ENST00000217999 SIN3AQ96ST3 1273 aa20.56■□□□□ 0.88
RHOXF1-201ENST00000217999 ROCK2O75116 1388 aaKnown RBP20.56■□□□□ 0.88
RHOXF1-201ENST00000217999 ATAD2Q6PL18 1390 aa20.56■□□□□ 0.88
RHOXF1-201ENST00000217999 PAK3O75914 559 aaPredicted RBP20.55■□□□□ 0.88
RHOXF1-201ENST00000217999 PLEKHG5O94827 1062 aa20.55■□□□□ 0.88
RHOXF1-201ENST00000217999 UNC5CLQ8IV45 518 aa20.55■□□□□ 0.88
RHOXF1-201ENST00000217999 CABLES1Q8TDN4 633 aa20.54■□□□□ 0.88
RHOXF1-201ENST00000217999 UPF1Q92900 1129 aaKnown RBP eCLIP20.54■□□□□ 0.88
RHOXF1-201ENST00000217999 SRPK2P78362 688 aaKnown RBP20.53■□□□□ 0.88
RHOXF1-201ENST00000217999 CCDC61Q9Y6R9 512 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms