RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 MAST1Q9Y2H9 1570 aa19.25■□□□□ 0.67
EFNB1-201ENST00000204961 CGNL1Q0VF96 1302 aa19.25■□□□□ 0.67
EFNB1-201ENST00000204961 ABCC2Q92887 1545 aa19.25■□□□□ 0.67
EFNB1-201ENST00000204961 E9PCH4 1651 aa19.24■□□□□ 0.67
EFNB1-201ENST00000204961 RIPK4P57078 832 aa19.24■□□□□ 0.67
EFNB1-201ENST00000204961 PRAM1Q96QH2 718 aa19.24■□□□□ 0.67
EFNB1-201ENST00000204961 UPF2Q9HAU5 1272 aaKnown RBP19.24■□□□□ 0.67
EFNB1-201ENST00000204961 LNPKQ9C0E8 428 aa19.24■□□□□ 0.67
EFNB1-201ENST00000204961 IDI1Q13907 227 aa19.23■□□□□ 0.67
EFNB1-201ENST00000204961 WAPLQ7Z5K2 1190 aa19.23■□□□□ 0.67
EFNB1-201ENST00000204961 SLC24A1O60721 1099 aa19.22■□□□□ 0.67
EFNB1-201ENST00000204961 NOB1Q9ULX3 412 aaKnown RBP19.22■□□□□ 0.67
EFNB1-201ENST00000204961 NCKAP5LQ9HCH0 1330 aa19.21■□□□□ 0.67
EFNB1-201ENST00000204961 ERVK-7P63135 1459 aa19.21■□□□□ 0.67
EFNB1-201ENST00000204961 SSH1Q8WYL5 1049 aa19.21■□□□□ 0.67
EFNB1-201ENST00000204961 CABP1Q9NZU7 370 aa19.21■□□□□ 0.67
EFNB1-201ENST00000204961 TRMT2AQ8IZ69 625 aaKnown RBP19.2■□□□□ 0.66
EFNB1-201ENST00000204961 ZRANB1Q9UGI0 708 aa19.2■□□□□ 0.66
EFNB1-201ENST00000204961 DZIP1LQ8IYY4 767 aaKnown RBP19.2■□□□□ 0.66
EFNB1-201ENST00000204961 CLTCL1P53675 1640 aa19.2■□□□□ 0.66
EFNB1-201ENST00000204961 ZKSCAN2Q63HK3 967 aa19.18■□□□□ 0.66
EFNB1-201ENST00000204961 EVC2Q86UK5 1308 aa19.18■□□□□ 0.66
EFNB1-201ENST00000204961 CYB5RLQ6IPT4 315 aa19.18■□□□□ 0.66
EFNB1-201ENST00000204961 DCTN1Q14203 1278 aa19.18■□□□□ 0.66
EFNB1-201ENST00000204961 PDE3AQ14432 1141 aa19.18■□□□□ 0.66
EFNB1-201ENST00000204961 RWDD1Q9H446 243 aaPredicted RBP19.17■□□□□ 0.66
EFNB1-201ENST00000204961 C14orf93Q9H972 538 aaKnown RBP19.17■□□□□ 0.66
EFNB1-201ENST00000204961 TRIM27P14373 513 aa19.17■□□□□ 0.66
EFNB1-201ENST00000204961 IQGAP3Q86VI3 1631 aa19.17■□□□□ 0.66
EFNB1-201ENST00000204961 MYH16Q9H6N6 1097 aa19.17■□□□□ 0.66
EFNB1-201ENST00000204961 USP35Q9P2H5 1018 aa19.17■□□□□ 0.66
EFNB1-201ENST00000204961 BECN1Q14457 450 aa19.16■□□□□ 0.66
EFNB1-201ENST00000204961 TMEM57Q8N5G2 664 aa19.16■□□□□ 0.66
EFNB1-201ENST00000204961 USP19O94966 1318 aa19.16■□□□□ 0.66
EFNB1-201ENST00000204961 UNC13BO14795 1591 aa19.15■□□□□ 0.66
EFNB1-201ENST00000204961 TMPOP42166 694 aaKnown RBP19.15■□□□□ 0.66
EFNB1-201ENST00000204961 PIK3C2GO75747 1445 aa19.14■□□□□ 0.65
EFNB1-201ENST00000204961 ZCCHC11Q5TAX3 1644 aaKnown RBP19.14■□□□□ 0.65
EFNB1-201ENST00000204961 PMFBP1Q8TBY8 1022 aa19.14■□□□□ 0.65
EFNB1-201ENST00000204961 PRKAR2BP31323 418 aa19.13■□□□□ 0.65
EFNB1-201ENST00000204961 EIF2AK4Q9P2K8 1649 aaKnown RBP19.13■□□□□ 0.65
EFNB1-201ENST00000204961 TBC1D2Q9BYX2 928 aa19.13■□□□□ 0.65
EFNB1-201ENST00000204961 VGFO15240 615 aaPredicted RBP19.13■□□□□ 0.65
EFNB1-201ENST00000204961 HSP90AA1P07900 732 aaKnown RBP19.13■□□□□ 0.65
EFNB1-201ENST00000204961 RRS1Q15050 365 aaKnown RBP19.13■□□□□ 0.65
EFNB1-201ENST00000204961 TPRNQ4KMQ1 711 aa19.13■□□□□ 0.65
EFNB1-201ENST00000204961 MADDQ8WXG6 1647 aa19.13■□□□□ 0.65
EFNB1-201ENST00000204961 ABCC1P33527 1531 aa19.12■□□□□ 0.65
EFNB1-201ENST00000204961 FAM83GA6ND36 823 aa19.12■□□□□ 0.65
EFNB1-201ENST00000204961 ASXL2Q76L83 1435 aa19.12■□□□□ 0.65
EFNB1-201ENST00000204961 MVPQ14764 893 aaKnown RBP19.12■□□□□ 0.65
EFNB1-201ENST00000204961 ANKRD45Q5TZF3 282 aa19.12■□□□□ 0.65
EFNB1-201ENST00000204961 EMILIN1Q9Y6C2 1016 aa19.11■□□□□ 0.65
EFNB1-201ENST00000204961 FYB1O15117 783 aa19.11■□□□□ 0.65
EFNB1-201ENST00000204961 PTPRTO14522 1441 aa19.11■□□□□ 0.65
EFNB1-201ENST00000204961 INSRP06213 1382 aa19.1■□□□□ 0.65
EFNB1-201ENST00000204961 CDK19Q9BWU1 502 aa19.1■□□□□ 0.65
EFNB1-201ENST00000204961 DIAPH1O60610 1272 aaKnown RBP19.1■□□□□ 0.65
EFNB1-201ENST00000204961 PHACTR3Q96KR7 559 aa19.1■□□□□ 0.65
EFNB1-201ENST00000204961 TSPYL6Q8N831 410 aa19.09■□□□□ 0.65
EFNB1-201ENST00000204961 ATP7AQ04656 1500 aa19.09■□□□□ 0.65
EFNB1-201ENST00000204961 ATAD2Q6PL18 1390 aa19.08■□□□□ 0.65
EFNB1-201ENST00000204961 C22orf23Q9BZE7 217 aa19.08■□□□□ 0.64
EFNB1-201ENST00000204961 KRT24Q2M2I5 525 aa19.07■□□□□ 0.64
EFNB1-201ENST00000204961 TRIM35Q9UPQ4 493 aa19.07■□□□□ 0.64
EFNB1-201ENST00000204961 TXNDC2Q86VQ3 553 aa19.07■□□□□ 0.64
EFNB1-201ENST00000204961 ZFYVE16Q7Z3T8 1539 aa19.06■□□□□ 0.64
EFNB1-201ENST00000204961 NPATQ14207 1427 aa19.05■□□□□ 0.64
EFNB1-201ENST00000204961 NME9Q86XW9 330 aa19.05■□□□□ 0.64
EFNB1-201ENST00000204961 WDR63Q8IWG1 891 aa19.05■□□□□ 0.64
EFNB1-201ENST00000204961 MIS18AQ9NYP9 233 aa19.05■□□□□ 0.64
EFNB1-201ENST00000204961 A0A1W2PP64 1363 aa19.05■□□□□ 0.64
EFNB1-201ENST00000204961 POLR3AO14802 1390 aaPredicted RBP19.05■□□□□ 0.64
EFNB1-201ENST00000204961 TRPM2O94759 1503 aa19.05■□□□□ 0.64
EFNB1-201ENST00000204961 ATF7IPQ6VMQ6 1270 aa19.05■□□□□ 0.64
EFNB1-201ENST00000204961 NECTIN2Q92692 538 aa19.05■□□□□ 0.64
EFNB1-201ENST00000204961 RBM42Q9BTD8 480 aaKnown RBP19.05■□□□□ 0.64
EFNB1-201ENST00000204961 HDGFL2Q7Z4V5 671 aaPredicted RBP19.04■□□□□ 0.64
EFNB1-201ENST00000204961 TERF2IPQ9NYB0 399 aa19.04■□□□□ 0.64
EFNB1-201ENST00000204961 ZNF428Q96B54 188 aa19.04■□□□□ 0.64
EFNB1-201ENST00000204961 CD109Q6YHK3 1445 aa19.04■□□□□ 0.64
EFNB1-201ENST00000204961 PLXNC1O60486 1568 aa19.04■□□□□ 0.64
EFNB1-201ENST00000204961 OSCARQ8IYS5 282 aa19.02■□□□□ 0.64
EFNB1-201ENST00000204961 STAC3Q96MF2 364 aa19.02■□□□□ 0.64
EFNB1-201ENST00000204961 PANK2Q9BZ23 570 aa19.02■□□□□ 0.64
EFNB1-201ENST00000204961 FOXD4L5Q5VV16 416 aaPredicted RBP19.02■□□□□ 0.63
EFNB1-201ENST00000204961 FOXD4L4Q8WXT5 416 aaPredicted RBP19.02■□□□□ 0.63
EFNB1-201ENST00000204961 KDM5AP29375 1690 aaKnown RBP19.01■□□□□ 0.63
EFNB1-201ENST00000204961 SYNMO15061 1565 aa19■□□□□ 0.63
EFNB1-201ENST00000204961 SPHKAPQ2M3C7 1700 aa19■□□□□ 0.63
EFNB1-201ENST00000204961 ABCA6Q8N139 1617 aa19■□□□□ 0.63
EFNB1-201ENST00000204961 ZBTB7CA1YPR0 619 aa19■□□□□ 0.63
EFNB1-201ENST00000204961 TBC1D32Q96NH3 1257 aa19■□□□□ 0.63
EFNB1-201ENST00000204961 HSP90AB1P08238 724 aaKnown RBP18.99■□□□□ 0.63
EFNB1-201ENST00000204961 DDX19BQ9UMR2 479 aa18.98■□□□□ 0.63
EFNB1-201ENST00000204961 RTEL1-TNFRSF6BF6WH68 1400 aa18.97■□□□□ 0.63
EFNB1-201ENST00000204961 IQGAP1P46940 1657 aa18.97■□□□□ 0.63
EFNB1-201ENST00000204961 NUTM2GQ5VZR2 741 aa18.97■□□□□ 0.63
EFNB1-201ENST00000204961 SLC4A10Q6U841 1118 aa18.97■□□□□ 0.63
EFNB1-201ENST00000204961 HSCBQ8IWL3 235 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms