RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 HSP90AB4PQ58FF6 505 aa20.68■□□□□ 0.9
ITGB4-201ENST00000200181 RNF214Q8ND24 703 aa20.68■□□□□ 0.9
ITGB4-201ENST00000200181 TSPYL1Q9H0U9 437 aa20.68■□□□□ 0.9
ITGB4-201ENST00000200181 SDF4Q9BRK5 362 aa20.67■□□□□ 0.9
ITGB4-201ENST00000200181 MSH5O43196 834 aa20.67■□□□□ 0.9
ITGB4-201ENST00000200181 RBM10P98175 930 aaKnown RBP20.67■□□□□ 0.9
ITGB4-201ENST00000200181 LEKR1Q6ZMV7 388 aa20.67■□□□□ 0.9
ITGB4-201ENST00000200181 FKBP5Q13451 457 aaPredicted RBP20.67■□□□□ 0.9
ITGB4-201ENST00000200181 EVA1CP58658 441 aa20.67■□□□□ 0.9
ITGB4-201ENST00000200181 EVC2Q86UK5 1308 aa20.67■□□□□ 0.9
ITGB4-201ENST00000200181 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.66■□□□□ 0.9
ITGB4-201ENST00000200181 TRIM5Q9C035 493 aa20.66■□□□□ 0.9
ITGB4-201ENST00000200181 CCP110O43303 1012 aa20.66■□□□□ 0.9
ITGB4-201ENST00000200181 RIPK4P57078 832 aa20.65■□□□□ 0.9
ITGB4-201ENST00000200181 LNPKQ9C0E8 428 aa20.65■□□□□ 0.9
ITGB4-201ENST00000200181 SMC2O95347 1197 aa20.65■□□□□ 0.9
ITGB4-201ENST00000200181 DIAPH1O60610 1272 aaKnown RBP20.64■□□□□ 0.9
ITGB4-201ENST00000200181 CDC45O75419 566 aa20.64■□□□□ 0.89
ITGB4-201ENST00000200181 SMARCE1Q969G3 411 aa20.64■□□□□ 0.89
ITGB4-201ENST00000200181 XBP1P17861 261 aa20.63■□□□□ 0.89
ITGB4-201ENST00000200181 HSP90AB3PQ58FF7 597 aa20.63■□□□□ 0.89
ITGB4-201ENST00000200181 CCDC144AA2RUR9 1427 aa20.63■□□□□ 0.89
ITGB4-201ENST00000200181 AXDND1Q5T1B0 1012 aaPredicted RBP20.63■□□□□ 0.89
ITGB4-201ENST00000200181 UACAQ9BZF9 1416 aa20.63■□□□□ 0.89
ITGB4-201ENST00000200181 CWC22Q9HCG8 908 aaKnown RBP20.63■□□□□ 0.89
ITGB4-201ENST00000200181 TSPY26PQ9H489 355 aa20.62■□□□□ 0.89
ITGB4-201ENST00000200181 PSMA5P28066 241 aa20.62■□□□□ 0.89
ITGB4-201ENST00000200181 WASHC4Q2M389 1173 aa20.62■□□□□ 0.89
ITGB4-201ENST00000200181 NINLQ9Y2I6 1382 aa20.61■□□□□ 0.89
ITGB4-201ENST00000200181 SAMD1Q6SPF0 538 aaPredicted RBP20.61■□□□□ 0.89
ITGB4-201ENST00000200181 FILIP1LQ4L180 1135 aa20.6■□□□□ 0.89
ITGB4-201ENST00000200181 CAVIN1Q6NZI2 390 aaKnown RBP20.6■□□□□ 0.89
ITGB4-201ENST00000200181 BRPF3Q9ULD4 1205 aa20.6■□□□□ 0.89
ITGB4-201ENST00000200181 TRAK2O60296 914 aa20.6■□□□□ 0.89
ITGB4-201ENST00000200181 RSPH4AQ5TD94 716 aa20.6■□□□□ 0.89
ITGB4-201ENST00000200181 CCDC27Q2M243 656 aa20.59■□□□□ 0.89
ITGB4-201ENST00000200181 NEUROD6Q96NK8 337 aa20.59■□□□□ 0.89
ITGB4-201ENST00000200181 MBD3O95983 291 aa20.59■□□□□ 0.89
ITGB4-201ENST00000200181 MAGEC2Q9UBF1 373 aaPredicted RBP20.59■□□□□ 0.89
ITGB4-201ENST00000200181 FYB1O15117 783 aa20.58■□□□□ 0.89
ITGB4-201ENST00000200181 ZRSR2Q15696 482 aaKnown RBP20.58■□□□□ 0.89
ITGB4-201ENST00000200181 KINO60870 393 aaKnown RBP20.58■□□□□ 0.89
ITGB4-201ENST00000200181 HMGN5P82970 282 aaKnown RBP20.58■□□□□ 0.89
ITGB4-201ENST00000200181 CT47B1P0C2W7 299 aaPredicted RBP20.58■□□□□ 0.88
ITGB4-201ENST00000200181 USP47Q96K76 1375 aa20.57■□□□□ 0.88
ITGB4-201ENST00000200181 RUNDC1Q96C34 613 aa20.57■□□□□ 0.88
ITGB4-201ENST00000200181 KDM4AO75164 1064 aa20.56■□□□□ 0.88
ITGB4-201ENST00000200181 CNTROBQ8N137 903 aa20.55■□□□□ 0.88
ITGB4-201ENST00000200181 TSPYL4Q9UJ04 414 aa20.55■□□□□ 0.88
ITGB4-201ENST00000200181 ERLIN2O94905 339 aa20.55■□□□□ 0.88
ITGB4-201ENST00000200181 NEFHP12036 1026 aa20.55■□□□□ 0.88
ITGB4-201ENST00000200181 GNAI1P63096 354 aa20.55■□□□□ 0.88
ITGB4-201ENST00000200181 AAMPQ13685 434 aa20.55■□□□□ 0.88
ITGB4-201ENST00000200181 RBM33Q96EV2 1170 aaKnown RBP20.55■□□□□ 0.88
ITGB4-201ENST00000200181 KIF7Q2M1P5 1343 aa20.55■□□□□ 0.88
ITGB4-201ENST00000200181 MINK1Q8N4C8 1332 aaPredicted RBP20.55■□□□□ 0.88
ITGB4-201ENST00000200181 KIAA0754O94854 1291 aa20.54■□□□□ 0.88
ITGB4-201ENST00000200181 GOLGA6L10A6NI86 522 aa20.54■□□□□ 0.88
ITGB4-201ENST00000200181 BRPF1P55201 1214 aaPredicted RBP20.54■□□□□ 0.88
ITGB4-201ENST00000200181 CCDC18Q5T9S5 1454 aa20.54■□□□□ 0.88
ITGB4-201ENST00000200181 FMNL2Q96PY5 1086 aa20.54■□□□□ 0.88
ITGB4-201ENST00000200181 SYCP1Q15431 976 aa20.53■□□□□ 0.88
ITGB4-201ENST00000200181 SYTL4Q96C24 671 aaPredicted RBP20.53■□□□□ 0.88
ITGB4-201ENST00000200181 VGFO15240 615 aaPredicted RBP20.53■□□□□ 0.88
ITGB4-201ENST00000200181 IL27Q8NEV9 243 aa20.53■□□□□ 0.88
ITGB4-201ENST00000200181 PRPF40AO75400 957 aaKnown RBP20.52■□□□□ 0.88
ITGB4-201ENST00000200181 MTMR7Q9Y216 660 aa20.52■□□□□ 0.88
ITGB4-201ENST00000200181 RIC3Q7Z5B4 369 aa20.52■□□□□ 0.88
ITGB4-201ENST00000200181 CDK5RAP3Q96JB5 506 aa20.52■□□□□ 0.88
ITGB4-201ENST00000200181 FSD1Q9BTV5 496 aa20.52■□□□□ 0.88
ITGB4-201ENST00000200181 PIP4K2AP48426 406 aaPredicted RBP20.52■□□□□ 0.88
ITGB4-201ENST00000200181 GOLGA6L7A0A1B0GV03 622 aa20.52■□□□□ 0.87
ITGB4-201ENST00000200181 SART3Q15020 963 aaKnown RBP20.52■□□□□ 0.87
ITGB4-201ENST00000200181 PODXL2Q9NZ53 605 aa20.52■□□□□ 0.87
ITGB4-201ENST00000200181 SPC24Q8NBT2 197 aa20.51■□□□□ 0.87
ITGB4-201ENST00000200181 UBTFL1P0CB47 393 aaPredicted RBP20.51■□□□□ 0.87
ITGB4-201ENST00000200181 DHX37Q8IY37 1157 aaKnown RBP20.51■□□□□ 0.87
ITGB4-201ENST00000200181 ZNF396Q96N95 335 aaPredicted RBP20.51■□□□□ 0.87
ITGB4-201ENST00000200181 TXLNAP40222 546 aa20.51■□□□□ 0.87
ITGB4-201ENST00000200181 PANK1Q8TE04 598 aa20.51■□□□□ 0.87
ITGB4-201ENST00000200181 BAZ1AQ9NRL2 1556 aaPredicted RBP20.5■□□□□ 0.87
ITGB4-201ENST00000200181 ZNHIT6Q9NWK9 470 aaKnown RBP20.5■□□□□ 0.87
ITGB4-201ENST00000200181 ATP2B1P20020 1258 aa20.49■□□□□ 0.87
ITGB4-201ENST00000200181 SEPT7Q16181 437 aaKnown RBP20.49■□□□□ 0.87
ITGB4-201ENST00000200181 ANKRD18AQ8IVF6 992 aa20.49■□□□□ 0.87
ITGB4-201ENST00000200181 ANKRD62A6NC57 917 aa20.49■□□□□ 0.87
ITGB4-201ENST00000200181 PDCP20941 246 aa20.49■□□□□ 0.87
ITGB4-201ENST00000200181 CCAR1Q8IX12 1150 aaKnown RBP20.49■□□□□ 0.87
ITGB4-201ENST00000200181 TMEM132AQ24JP5 1023 aa20.48■□□□□ 0.87
ITGB4-201ENST00000200181 IKQ13123 557 aaPredicted RBP20.48■□□□□ 0.87
ITGB4-201ENST00000200181 DHX8Q14562 1220 aaKnown RBP20.48■□□□□ 0.87
ITGB4-201ENST00000200181 MCM2P49736 904 aa20.48■□□□□ 0.87
ITGB4-201ENST00000200181 PAF1Q8N7H5 531 aa20.48■□□□□ 0.87
ITGB4-201ENST00000200181 SERPINC1P01008 464 aa20.47■□□□□ 0.87
ITGB4-201ENST00000200181 AIMP1Q12904 312 aaKnown RBP20.47■□□□□ 0.87
ITGB4-201ENST00000200181 ENOX2Q16206 610 aaKnown RBP20.47■□□□□ 0.87
ITGB4-201ENST00000200181 STK38Q15208 465 aa20.47■□□□□ 0.87
ITGB4-201ENST00000200181 CCDC181Q5TID7 509 aa20.47■□□□□ 0.87
ITGB4-201ENST00000200181 FIBPO43427 364 aa20.47■□□□□ 0.87
ITGB4-201ENST00000200181 KRT18P05783 430 aaKnown RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms