RNA–Protein interactions for RNA: ENST00000039989.8

TTC17-201, Transcript of tetratricopeptide repeat domain 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC17, Length 4,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC17-201ENST00000039989 TCP11L2Q8N4U5 519 aa14.02□□□□□ -0.17
TTC17-201ENST00000039989 PNISRQ8TF01 805 aaKnown RBP14.02□□□□□ -0.17
TTC17-201ENST00000039989 SMC4Q9NTJ3 1288 aa14.02□□□□□ -0.17
TTC17-201ENST00000039989 PRKAR2BP31323 418 aa14.01□□□□□ -0.17
TTC17-201ENST00000039989 SCAF11Q99590 1463 aaKnown RBP14□□□□□ -0.17
TTC17-201ENST00000039989 SULT6B1Q6IMI4 303 aa14□□□□□ -0.17
TTC17-201ENST00000039989 NGEFQ8N5V2 710 aa14□□□□□ -0.17
TTC17-201ENST00000039989 SLC4A10Q6U841 1118 aa14□□□□□ -0.17
TTC17-201ENST00000039989 SYTL4Q96C24 671 aaPredicted RBP13.99□□□□□ -0.17
TTC17-201ENST00000039989 THUMPD2Q9BTF0 503 aaKnown RBP13.99□□□□□ -0.17
TTC17-201ENST00000039989 ZFYVE16Q7Z3T8 1539 aa13.99□□□□□ -0.17
TTC17-201ENST00000039989 USHBP1Q8N6Y0 703 aa13.99□□□□□ -0.17
TTC17-201ENST00000039989 ARHGEF5Q12774 1597 aa13.98□□□□□ -0.17
TTC17-201ENST00000039989 GPRASP1Q5JY77 1395 aa13.98□□□□□ -0.17
TTC17-201ENST00000039989 ITPRIPQ8IWB1 547 aa13.97□□□□□ -0.17
TTC17-201ENST00000039989 TSR2Q969E8 191 aaKnown RBP13.97□□□□□ -0.17
TTC17-201ENST00000039989 MYH16Q9H6N6 1097 aa13.97□□□□□ -0.17
TTC17-201ENST00000039989 EIF2S2P20042 333 aaKnown RBP13.97□□□□□ -0.17
TTC17-201ENST00000039989 CARD14Q9BXL6 1004 aa13.97□□□□□ -0.17
TTC17-201ENST00000039989 PPP4R2Q9NY27 417 aa13.97□□□□□ -0.17
TTC17-201ENST00000039989 CDC42BPBQ9Y5S2 1711 aa13.97□□□□□ -0.17
TTC17-201ENST00000039989 MAST1Q9Y2H9 1570 aa13.96□□□□□ -0.17
TTC17-201ENST00000039989 ACEP12821 1306 aa13.96□□□□□ -0.17
TTC17-201ENST00000039989 ZBED9Q6R2W3 1325 aa13.96□□□□□ -0.17
TTC17-201ENST00000039989 PHF8Q9UPP1 1060 aa13.96□□□□□ -0.17
TTC17-201ENST00000039989 DDX17Q92841 729 aaKnown RBP13.96□□□□□ -0.17
TTC17-201ENST00000039989 RUNDC1Q96C34 613 aa13.95□□□□□ -0.18
TTC17-201ENST00000039989 UHRF1BP1Q6BDS2 1440 aa13.95□□□□□ -0.18
TTC17-201ENST00000039989 PLA2R1Q13018 1463 aa13.95□□□□□ -0.18
TTC17-201ENST00000039989 ATAD2Q6PL18 1390 aa13.95□□□□□ -0.18
TTC17-201ENST00000039989 DCTN1Q14203 1278 aa13.94□□□□□ -0.18
TTC17-201ENST00000039989 CABLES1Q8TDN4 633 aa13.94□□□□□ -0.18
TTC17-201ENST00000039989 RALGAPBQ86X10 1494 aa13.94□□□□□ -0.18
TTC17-201ENST00000039989 EXOC6Q8TAG9 804 aa13.94□□□□□ -0.18
TTC17-201ENST00000039989 ZNF692Q9BU19 519 aaPredicted RBP13.94□□□□□ -0.18
TTC17-201ENST00000039989 SHROOM2Q13796 1616 aa13.93□□□□□ -0.18
TTC17-201ENST00000039989 BRD4O60885 1362 aaPredicted RBP13.93□□□□□ -0.18
TTC17-201ENST00000039989 MLH3Q9UHC1 1453 aa13.93□□□□□ -0.18
TTC17-201ENST00000039989 COG6Q9Y2V7 657 aa13.93□□□□□ -0.18
TTC17-201ENST00000039989 TEFQ10587 303 aa13.93□□□□□ -0.18
TTC17-201ENST00000039989 CHRNA2Q15822 529 aa13.92□□□□□ -0.18
TTC17-201ENST00000039989 GCC2Q8IWJ2 1684 aa13.92□□□□□ -0.18
TTC17-201ENST00000039989 PLEKHH1Q9ULM0 1364 aa13.92□□□□□ -0.18
TTC17-201ENST00000039989 MIS18AQ9NYP9 233 aa13.92□□□□□ -0.18
TTC17-201ENST00000039989 FYB1O15117 783 aa13.91□□□□□ -0.18
TTC17-201ENST00000039989 ADAMTS2O95450 1211 aa13.91□□□□□ -0.18
TTC17-201ENST00000039989 C1orf141Q5JVX7 400 aa13.91□□□□□ -0.18
TTC17-201ENST00000039989 PRDM11Q9NQV5 511 aa13.91□□□□□ -0.18
TTC17-201ENST00000039989 ADGBQ8N7X0 1667 aa13.91□□□□□ -0.18
TTC17-201ENST00000039989 NPHP1O15259 732 aa13.9□□□□□ -0.18
TTC17-201ENST00000039989 ORAI2Q96SN7 254 aa13.9□□□□□ -0.18
TTC17-201ENST00000039989 AMER1Q5JTC6 1135 aaPredicted RBP13.9□□□□□ -0.18
TTC17-201ENST00000039989 RAPGEF4Q8WZA2 1011 aa13.9□□□□□ -0.18
TTC17-201ENST00000039989 PRDM15P57071 1507 aaPredicted RBP13.9□□□□□ -0.18
TTC17-201ENST00000039989 HSP90AB2PQ58FF8 381 aa13.89□□□□□ -0.19
TTC17-201ENST00000039989 DDX54Q8TDD1 881 aaKnown RBP13.89□□□□□ -0.19
TTC17-201ENST00000039989 CRBNQ96SW2 442 aa13.89□□□□□ -0.19
TTC17-201ENST00000039989 ANP32AP39687 249 aaKnown RBP13.88□□□□□ -0.19
TTC17-201ENST00000039989 E9PSI1 815 aa13.88□□□□□ -0.19
TTC17-201ENST00000039989 STK31Q9BXU1 1019 aa13.88□□□□□ -0.19
TTC17-201ENST00000039989 YTHDC2Q9H6S0 1430 aaKnown RBP13.88□□□□□ -0.19
TTC17-201ENST00000039989 COL17A1Q9UMD9 1497 aaPredicted RBP13.88□□□□□ -0.19
TTC17-201ENST00000039989 HECW2Q9P2P5 1572 aa13.87□□□□□ -0.19
TTC17-201ENST00000039989 KRT28Q7Z3Y7 464 aa13.87□□□□□ -0.19
TTC17-201ENST00000039989 PANK1Q8TE04 598 aa13.87□□□□□ -0.19
TTC17-201ENST00000039989 METP08581 1390 aa13.87□□□□□ -0.19
TTC17-201ENST00000039989 BCAR3O75815 825 aa13.87□□□□□ -0.19
TTC17-201ENST00000039989 OS9Q13438 667 aaPredicted RBP13.87□□□□□ -0.19
TTC17-201ENST00000039989 MEX3CQ5U5Q3 659 aaKnown RBP13.87□□□□□ -0.19
TTC17-201ENST00000039989 TOM1L2Q6ZVM7 507 aa13.87□□□□□ -0.19
TTC17-201ENST00000039989 TSPYL4Q9UJ04 414 aa13.87□□□□□ -0.19
TTC17-201ENST00000039989 CALD1Q05682 793 aaKnown RBP13.86□□□□□ -0.19
TTC17-201ENST00000039989 PDE3BQ13370 1112 aa13.86□□□□□ -0.19
TTC17-201ENST00000039989 TMEM2Q9UHN6 1383 aa13.86□□□□□ -0.19
TTC17-201ENST00000039989 EXOSC9Q06265 439 aaKnown RBP13.86□□□□□ -0.19
TTC17-201ENST00000039989 MCM10Q7L590 875 aa13.86□□□□□ -0.19
TTC17-201ENST00000039989 PER1O15534 1290 aaPredicted RBP13.85□□□□□ -0.19
TTC17-201ENST00000039989 RRP1P56182 461 aaKnown RBP13.85□□□□□ -0.19
TTC17-201ENST00000039989 LMOD3Q0VAK6 560 aa13.85□□□□□ -0.19
TTC17-201ENST00000039989 PPIP5K1Q6PFW1 1433 aa13.84□□□□□ -0.19
TTC17-201ENST00000039989 FAM83GA6ND36 823 aa13.84□□□□□ -0.19
TTC17-201ENST00000039989 TBX22Q9Y458 520 aa13.84□□□□□ -0.19
TTC17-201ENST00000039989 ABCA9Q8IUA7 1624 aa13.84□□□□□ -0.19
TTC17-201ENST00000039989 IPO8O15397 1037 aaKnown RBP13.83□□□□□ -0.2
TTC17-201ENST00000039989 AIMP1Q12904 312 aaKnown RBP13.83□□□□□ -0.2
TTC17-201ENST00000039989 SPATA31E1Q6ZUB1 1445 aa13.83□□□□□ -0.2
TTC17-201ENST00000039989 AEBP1Q8IUX7 1158 aa13.83□□□□□ -0.2
TTC17-201ENST00000039989 CHMP3Q9Y3E7 222 aa13.82□□□□□ -0.2
TTC17-201ENST00000039989 KAT6BQ8WYB5 2073 aa13.82□□□□□ -0.2
TTC17-201ENST00000039989 A0A1W2PP64 1363 aa13.82□□□□□ -0.2
TTC17-201ENST00000039989 ZNF530Q6P9A1 599 aaPredicted RBP13.82□□□□□ -0.2
TTC17-201ENST00000039989 TTC21BQ7Z4L5 1316 aa13.82□□□□□ -0.2
TTC17-201ENST00000039989 UPF2Q9HAU5 1272 aaKnown RBP13.8□□□□□ -0.2
TTC17-201ENST00000039989 ABCC3O15438 1527 aa13.8□□□□□ -0.2
TTC17-201ENST00000039989 TMPOP42166 694 aaKnown RBP13.8□□□□□ -0.2
TTC17-201ENST00000039989 LRRC59Q96AG4 307 aaKnown RBP13.8□□□□□ -0.2
TTC17-201ENST00000039989 HSP90AA1P07900 732 aaKnown RBP13.79□□□□□ -0.2
TTC17-201ENST00000039989 CADPS2Q86UW7 1296 aa13.79□□□□□ -0.2
TTC17-201ENST00000039989 WWC1Q8IX03 1113 aa13.79□□□□□ -0.2
TTC17-201ENST00000039989 CFAP74Q9C0B2 1584 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms