RNA–Protein interactions for RNA: ENST00000002829.7

SEMA3F-201, Transcript of semaphorin 3F, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,802 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-201ENST00000002829 RBM33Q96EV2 1170 aaKnown RBP17.06■□□□□ 0.32
SEMA3F-201ENST00000002829 PANK2Q9BZ23 570 aa17.05■□□□□ 0.32
SEMA3F-201ENST00000002829 FAM135AQ9P2D6 1515 aa17.05■□□□□ 0.32
SEMA3F-201ENST00000002829 RARSP54136 660 aaKnown RBP17.05■□□□□ 0.32
SEMA3F-201ENST00000002829 SSH1Q8WYL5 1049 aa17.04■□□□□ 0.32
SEMA3F-201ENST00000002829 CDK19Q9BWU1 502 aa17.04■□□□□ 0.32
SEMA3F-201ENST00000002829 KDM5BQ9UGL1 1544 aa17.03■□□□□ 0.32
SEMA3F-201ENST00000002829 MPNDQ8N594 471 aa17.03■□□□□ 0.32
SEMA3F-201ENST00000002829 NCKAP5LQ9HCH0 1330 aa17.03■□□□□ 0.32
SEMA3F-201ENST00000002829 PLCB2Q00722 1185 aa17.03■□□□□ 0.32
SEMA3F-201ENST00000002829 TARBP1Q13395 1621 aaKnown RBP17.03■□□□□ 0.32
SEMA3F-201ENST00000002829 ZRANB1Q9UGI0 708 aa17.03■□□□□ 0.32
SEMA3F-201ENST00000002829 DNMT1P26358 1616 aaKnown RBP17.03■□□□□ 0.32
SEMA3F-201ENST00000002829 NOS1P29475 1434 aa17.02■□□□□ 0.32
SEMA3F-201ENST00000002829 TRHP20396 242 aaPredicted RBP17.02■□□□□ 0.32
SEMA3F-201ENST00000002829 A2MP01023 1474 aa17.02■□□□□ 0.32
SEMA3F-201ENST00000002829 EIF4G3O43432 1585 aaKnown RBP17.02■□□□□ 0.32
SEMA3F-201ENST00000002829 CFAP65Q6ZU64 1925 aaKnown RBP17.02■□□□□ 0.31
SEMA3F-201ENST00000002829 TMEM57Q8N5G2 664 aa17.01■□□□□ 0.31
SEMA3F-201ENST00000002829 NGDNQ8NEJ9 315 aaKnown RBP17.01■□□□□ 0.31
SEMA3F-201ENST00000002829 RSPH6AQ9H0K4 717 aa17.01■□□□□ 0.31
SEMA3F-201ENST00000002829 EMILIN1Q9Y6C2 1016 aa17.01■□□□□ 0.31
SEMA3F-201ENST00000002829 SLC26A8Q96RN1 970 aa17.01■□□□□ 0.31
SEMA3F-201ENST00000002829 C22orf23Q9BZE7 217 aa17.01■□□□□ 0.31
SEMA3F-201ENST00000002829 RTF1Q92541 710 aaKnown RBP17■□□□□ 0.31
SEMA3F-201ENST00000002829 FAM83GA6ND36 823 aa17■□□□□ 0.31
SEMA3F-201ENST00000002829 LRPPRCP42704 1394 aaKnown RBP17■□□□□ 0.31
SEMA3F-201ENST00000002829 L1TD1Q5T7N2 865 aaKnown RBP17■□□□□ 0.31
SEMA3F-201ENST00000002829 TMPOP42166 694 aaKnown RBP16.99■□□□□ 0.31
SEMA3F-201ENST00000002829 COG3Q96JB2 828 aa16.99■□□□□ 0.31
SEMA3F-201ENST00000002829 RBM10P98175 930 aaKnown RBP16.98■□□□□ 0.31
SEMA3F-201ENST00000002829 C8orf34Q49A92 452 aa16.98■□□□□ 0.31
SEMA3F-201ENST00000002829 TRIM6-TRIM34B2RNG4 842 aa16.97■□□□□ 0.31
SEMA3F-201ENST00000002829 NME9Q86XW9 330 aa16.97■□□□□ 0.31
SEMA3F-201ENST00000002829 AMPHP49418 695 aa16.97■□□□□ 0.31
SEMA3F-201ENST00000002829 OS9Q13438 667 aaPredicted RBP16.97■□□□□ 0.31
SEMA3F-201ENST00000002829 CCDC9Q9Y3X0 531 aaKnown RBP16.97■□□□□ 0.31
SEMA3F-201ENST00000002829 CEP170Q5SW79 1584 aa16.97■□□□□ 0.31
SEMA3F-201ENST00000002829 PDE3AQ14432 1141 aa16.97■□□□□ 0.31
SEMA3F-201ENST00000002829 DDX19BQ9UMR2 479 aa16.97■□□□□ 0.31
SEMA3F-201ENST00000002829 BCL11BQ9C0K0 894 aaPredicted RBP16.96■□□□□ 0.31
SEMA3F-201ENST00000002829 EIF2S2P20042 333 aaKnown RBP16.96■□□□□ 0.31
SEMA3F-201ENST00000002829 DNTTIP2Q5QJE6 756 aaKnown RBP16.96■□□□□ 0.31
SEMA3F-201ENST00000002829 PBRM1Q86U86 1689 aa16.96■□□□□ 0.31
SEMA3F-201ENST00000002829 LRRIQ1Q96JM4 1722 aa16.95■□□□□ 0.3
SEMA3F-201ENST00000002829 RNF123Q5XPI4 1314 aa16.95■□□□□ 0.3
SEMA3F-201ENST00000002829 TRIM27P14373 513 aa16.95■□□□□ 0.3
SEMA3F-201ENST00000002829 MVPQ14764 893 aaKnown RBP16.95■□□□□ 0.3
SEMA3F-201ENST00000002829 SULT6B1Q6IMI4 303 aa16.94■□□□□ 0.3
SEMA3F-201ENST00000002829 RILPL2Q969X0 211 aa16.94■□□□□ 0.3
SEMA3F-201ENST00000002829 PKNOX2Q96KN3 472 aa16.94■□□□□ 0.3
SEMA3F-201ENST00000002829 RRAGDQ9NQL2 400 aaPredicted RBP16.94■□□□□ 0.3
SEMA3F-201ENST00000002829 BCORL1Q5H9F3 1711 aa16.94■□□□□ 0.3
SEMA3F-201ENST00000002829 ATF7IPQ6VMQ6 1270 aa16.93■□□□□ 0.3
SEMA3F-201ENST00000002829 KRT24Q2M2I5 525 aa16.93■□□□□ 0.3
SEMA3F-201ENST00000002829 MCM10Q7L590 875 aa16.93■□□□□ 0.3
SEMA3F-201ENST00000002829 ADGRL1O94910 1474 aa16.93■□□□□ 0.3
SEMA3F-201ENST00000002829 GOLGA6L22H0YM25 854 aa16.92■□□□□ 0.3
SEMA3F-201ENST00000002829 PTMAP06454 111 aaKnown RBP16.92■□□□□ 0.3
SEMA3F-201ENST00000002829 FAM13BQ9NYF5 915 aa16.92■□□□□ 0.3
SEMA3F-201ENST00000002829 TRAK2O60296 914 aa16.91■□□□□ 0.3
SEMA3F-201ENST00000002829 NGEFQ8N5V2 710 aa16.91■□□□□ 0.3
SEMA3F-201ENST00000002829 SCAF11Q99590 1463 aaKnown RBP16.9■□□□□ 0.3
SEMA3F-201ENST00000002829 FANCAO15360 1455 aa16.9■□□□□ 0.3
SEMA3F-201ENST00000002829 MBD5Q9P267 1494 aa16.9■□□□□ 0.3
SEMA3F-201ENST00000002829 GPRASP1Q5JY77 1395 aa16.9■□□□□ 0.3
SEMA3F-201ENST00000002829 CEBPAP49715 358 aaPredicted RBP16.9■□□□□ 0.3
SEMA3F-201ENST00000002829 TWISTNBQ3B726 338 aaPredicted RBP16.9■□□□□ 0.3
SEMA3F-201ENST00000002829 MAGI2Q86UL8 1455 aa16.9■□□□□ 0.3
SEMA3F-201ENST00000002829 SMARCA5O60264 1052 aaPredicted RBP16.9■□□□□ 0.3
SEMA3F-201ENST00000002829 NKTRP30414 1462 aaKnown RBP16.89■□□□□ 0.29
SEMA3F-201ENST00000002829 PLA2R1Q13018 1463 aa16.89■□□□□ 0.29
SEMA3F-201ENST00000002829 GCC2Q8IWJ2 1684 aa16.89■□□□□ 0.29
SEMA3F-201ENST00000002829 FYB1O15117 783 aa16.88■□□□□ 0.29
SEMA3F-201ENST00000002829 TSHZ3Q63HK5 1081 aa16.88■□□□□ 0.29
SEMA3F-201ENST00000002829 CASC1Q6TDU7 716 aa16.88■□□□□ 0.29
SEMA3F-201ENST00000002829 TSPYL6Q8N831 410 aa16.88■□□□□ 0.29
SEMA3F-201ENST00000002829 TBC1D2Q9BYX2 928 aa16.88■□□□□ 0.29
SEMA3F-201ENST00000002829 C14orf93Q9H972 538 aaKnown RBP16.88■□□□□ 0.29
SEMA3F-201ENST00000002829 ZNF330Q9Y3S2 320 aaPredicted RBP16.88■□□□□ 0.29
SEMA3F-201ENST00000002829 PLCH2O75038 1416 aa16.87■□□□□ 0.29
SEMA3F-201ENST00000002829 UHRF1BP1Q6BDS2 1440 aa16.87■□□□□ 0.29
SEMA3F-201ENST00000002829 FAM43AQ8N2R8 423 aa16.87■□□□□ 0.29
SEMA3F-201ENST00000002829 PHACTR3Q96KR7 559 aa16.87■□□□□ 0.29
SEMA3F-201ENST00000002829 NUP160Q12769 1436 aa16.87■□□□□ 0.29
SEMA3F-201ENST00000002829 F6X3S4 739 aa16.86■□□□□ 0.29
SEMA3F-201ENST00000002829 MSNP26038 577 aaKnown RBP16.86■□□□□ 0.29
SEMA3F-201ENST00000002829 UBE2Q2Q8WVN8 375 aa16.86■□□□□ 0.29
SEMA3F-201ENST00000002829 FKBP5Q13451 457 aaPredicted RBP16.86■□□□□ 0.29
SEMA3F-201ENST00000002829 WDR63Q8IWG1 891 aa16.86■□□□□ 0.29
SEMA3F-201ENST00000002829 RBM42Q9BTD8 480 aaKnown RBP16.86■□□□□ 0.29
SEMA3F-201ENST00000002829 STK31Q9BXU1 1019 aa16.86■□□□□ 0.29
SEMA3F-201ENST00000002829 KCNJ4P48050 445 aa16.85■□□□□ 0.29
SEMA3F-201ENST00000002829 COL17A1Q9UMD9 1497 aaPredicted RBP16.85■□□□□ 0.29
SEMA3F-201ENST00000002829 UGGT1Q9NYU2 1555 aa16.85■□□□□ 0.29
SEMA3F-201ENST00000002829 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.85■□□□□ 0.29
SEMA3F-201ENST00000002829 NAP1L2Q9ULW6 460 aaPredicted RBP16.85■□□□□ 0.29
SEMA3F-201ENST00000002829 XPCQ01831 940 aaPredicted RBP16.85■□□□□ 0.29
SEMA3F-201ENST00000002829 DTNBO60941 627 aa16.84■□□□□ 0.29
SEMA3F-201ENST00000002829 DDX49Q9Y6V7 483 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms