RNA–Protein interactions for RNA: YOR239W

ABP140, Transcript of AdoMet-dependent tRNA methyltransferase and actin binding protein, yeastyeast

Gene ABP140, Length 1,887 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP140YOR239W YBR200W-AQ3E755 54 aa2.77□□□□□ -1.97
ABP140YOR239W FPR1P20081 114 aaKnown RBP2.75□□□□□ -1.97
ABP140YOR239W YCR043CP25361 127 aa2.75□□□□□ -1.97
ABP140YOR239W MRPL39P36533 70 aa2.75□□□□□ -1.97
ABP140YOR239W YER084WP40057 128 aa2.75□□□□□ -1.97
ABP140YOR239W COX14P39103 70 aa2.74□□□□□ -1.97
ABP140YOR239W FMP27Q06179 2628 aa2.74□□□□□ -1.97
ABP140YOR239W QCR10P37299 77 aa2.73□□□□□ -1.97
ABP140YOR239W YOR032W-AQ8TGS1 66 aa2.73□□□□□ -1.97
ABP140YOR239W YIL086CP40503 102 aa2.73□□□□□ -1.97
ABP140YOR239W SIP18P50263 79 aa2.73□□□□□ -1.97
ABP140YOR239W LIP1Q03579 150 aa2.73□□□□□ -1.97
ABP140YOR239W YIL156W-BQ2V2P4 73 aa2.73□□□□□ -1.97
ABP140YOR239W YLL006W-AQ3E814 58 aa2.73□□□□□ -1.97
ABP140YOR239W HUB1Q6Q546 73 aa2.73□□□□□ -1.97
ABP140YOR239W YOL085CQ99345 113 aa2.73□□□□□ -1.97
ABP140YOR239W IRA1P18963 3092 aa2.73□□□□□ -1.97
ABP140YOR239W RPS11AP0CX47 156 aaKnown RBP2.72□□□□□ -1.97
ABP140YOR239W RPS11BP0CX48 156 aaKnown RBP2.72□□□□□ -1.97
ABP140YOR239W YKL097CP34245 136 aa2.72□□□□□ -1.97
ABP140YOR239W POR2P40478 281 aa2.72□□□□□ -1.97
ABP140YOR239W YGR025WP53216 100 aa2.72□□□□□ -1.97
ABP140YOR239W YCR095W-AQ3E787 52 aa2.72□□□□□ -1.97
ABP140YOR239W YMR105W-AQ8TGS8 64 aa2.72□□□□□ -1.97
ABP140YOR239W YER145C-AA0A023PYF4 145 aa2.71□□□□□ -1.98
ABP140YOR239W CCW12Q12127 133 aa2.71□□□□□ -1.98
ABP140YOR239W YPR010C-AA5Z2X5 72 aa2.71□□□□□ -1.98
ABP140YOR239W MRPL38P35996 138 aaPredicted RBP2.71□□□□□ -1.98
ABP140YOR239W YOL014WQ08110 124 aa2.71□□□□□ -1.98
ABP140YOR239W YIL046W-AQ3E7Z4 54 aa2.71□□□□□ -1.98
ABP140YOR239W YMR122W-AQ3E842 84 aa2.71□□□□□ -1.98
ABP140YOR239W YFR032C-BQ8TGU2 87 aa2.71□□□□□ -1.98
ABP140YOR239W YIL102CP40488 101 aa2.7□□□□□ -1.98
ABP140YOR239W SPC1P46965 94 aa2.7□□□□□ -1.98
ABP140YOR239W TMC1Q08422 150 aaPredicted RBP2.7□□□□□ -1.98
ABP140YOR239W YNL042W-BQ3E7Z2 85 aa2.7□□□□□ -1.98
ABP140YOR239W COX23P38824 151 aa2.69□□□□□ -1.98
ABP140YOR239W VAM10Q08474 114 aa2.69□□□□□ -1.98
ABP140YOR239W YGL149WP53116 101 aa2.69□□□□□ -1.98
ABP140YOR239W SOM1Q05676 74 aa2.69□□□□□ -1.98
ABP140YOR239W YPR013CQ12145 317 aa2.69□□□□□ -1.98
ABP140YOR239W YDR010CQ12426 110 aa2.69□□□□□ -1.98
ABP140YOR239W YCR001WP25347 104 aa2.68□□□□□ -1.98
ABP140YOR239W YBR219CP38317 127 aa2.68□□□□□ -1.98
ABP140YOR239W MRX7P53869 86 aa2.68□□□□□ -1.98
ABP140YOR239W MRPS8Q03799 155 aa2.68□□□□□ -1.98
ABP140YOR239W RPL39P04650 51 aa2.67□□□□□ -1.98
ABP140YOR239W RPL29P05747 59 aaPredicted RBP2.67□□□□□ -1.98
ABP140YOR239W YOL013W-AP0C272 63 aaPredicted RBP2.67□□□□□ -1.98
ABP140YOR239W EDC2P40023 145 aaPredicted RBP2.67□□□□□ -1.98
ABP140YOR239W FYV12Q08559 129 aa2.67□□□□□ -1.98
ABP140YOR239W YMR001C-AQ8TGS9 76 aa2.67□□□□□ -1.98
ABP140YOR239W YLR157W-DP0CE99 70 aa2.67□□□□□ -1.98
ABP140YOR239W SDH6Q3E785 79 aa2.67□□□□□ -1.98
ABP140YOR239W GCN1P33892 2672 aaKnown RBP2.66□□□□□ -1.98
ABP140YOR239W AQY2P0CD90 149 aa2.66□□□□□ -1.98
ABP140YOR239W WWM1P43582 211 aaKnown RBP2.66□□□□□ -1.98
ABP140YOR239W YHR213W-BQ8TGK1 99 aa2.66□□□□□ -1.98
ABP140YOR239W BSC4P53841 131 aa2.65□□□□□ -1.98
ABP140YOR239W PMP3P87284 55 aa2.65□□□□□ -1.98
ABP140YOR239W ATP17Q06405 101 aa2.65□□□□□ -1.98
ABP140YOR239W YNL146C-AQ3E7Z1 64 aa2.65□□□□□ -1.98
ABP140YOR239W YJL197C-AP0C5P0 93 aa2.65□□□□□ -1.99
ABP140YOR239W YHR125WP38831 101 aa2.64□□□□□ -1.99
ABP140YOR239W SNA2P56508 79 aa2.64□□□□□ -1.99
ABP140YOR239W YJL133C-AQ3E7A3 74 aa2.63□□□□□ -1.99
ABP140YOR239W YAR023CD6VPM8 179 aa2.62□□□□□ -1.99
ABP140YOR239W YBR027CP38220 110 aa2.62□□□□□ -1.99
ABP140YOR239W YNL162W-AQ3E7A8 72 aa2.62□□□□□ -1.99
ABP140YOR239W YOR011W-AQ3E807 68 aa2.62□□□□□ -1.99
ABP140YOR239W MVB12P42939 101 aa2.61□□□□□ -1.99
ABP140YOR239W YDL241WQ07738 123 aa2.6□□□□□ -1.99
ABP140YOR239W YBL008W-AQ3E821 79 aa2.6□□□□□ -1.99
ABP140YOR239W RTC6O14464 93 aa2.6□□□□□ -1.99
ABP140YOR239W YNL122CP53921 115 aaPredicted RBP2.6□□□□□ -1.99
ABP140YOR239W ECM19Q06011 112 aa2.6□□□□□ -1.99
ABP140YOR239W LCL2Q08045 131 aa2.6□□□□□ -1.99
ABP140YOR239W YBR230W-AQ3E762 66 aa2.6□□□□□ -1.99
ABP140YOR239W AUA1P32450 94 aa2.59□□□□□ -1.99
ABP140YOR239W YLR307C-AQ3E825 87 aa2.59□□□□□ -1.99
ABP140YOR239W YJL127C-BQ3E828 52 aa2.59□□□□□ -1.99
ABP140YOR239W CSF1Q12150 2958 aa2.58□□□□□ -2
ABP140YOR239W YPL278CQ08990 100 aa2.57□□□□□ -2
ABP140YOR239W PRP8P33334 2413 aaKnown RBP2.57□□□□□ -2
ABP140YOR239W YBL039W-BP0C268 59 aa2.56□□□□□ -2
ABP140YOR239W YAR064WP39563 99 aa2.56□□□□□ -2
ABP140YOR239W YCL048W-AQ2V2Q2 79 aa2.56□□□□□ -2
ABP140YOR239W YGL014C-AP0C5N1 53 aa2.55□□□□□ -2
ABP140YOR239W Q0032Q9ZZX7 96 aa2.55□□□□□ -2
ABP140YOR239W IGD1P43598 195 aa2.54□□□□□ -2
ABP140YOR239W DDR2P89113 61 aa2.54□□□□□ -2
ABP140YOR239W HOR7Q05827 59 aa2.54□□□□□ -2
ABP140YOR239W HFA1P32874 2273 aa2.54□□□□□ -2
ABP140YOR239W URA2P07259 2214 aaKnown RBP2.54□□□□□ -2
ABP140YOR239W YBR056W-AI2HB52 66 aa2.54□□□□□ -2
ABP140YOR239W SGF11Q03067 99 aa2.54□□□□□ -2
ABP140YOR239W TRA1P38811 3744 aa2.53□□□□□ -2
ABP140YOR239W RPC10P40422 70 aa2.53□□□□□ -2
ABP140YOR239W UTP20P35194 2493 aaKnown RBP2.53□□□□□ -2
ABP140YOR239W RDS3Q06835 107 aaPredicted RBP2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 7.1 ms