RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeastyeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAT1YOR048C SNA2P56508 79 aa3.69□□□□□ -1.82
RAT1YOR048C YMR230W-AQ3E7B5 62 aa3.69□□□□□ -1.82
RAT1YOR048C YAR029WP39549 74 aa3.68□□□□□ -1.82
RAT1YOR048C RPC10P40422 70 aa3.68□□□□□ -1.82
RAT1YOR048C GAT4P40569 121 aa3.68□□□□□ -1.82
RAT1YOR048C YMR175W-AQ3E766 64 aa3.68□□□□□ -1.82
RAT1YOR048C YGR035W-AQ45U48 73 aa3.68□□□□□ -1.82
RAT1YOR048C SGF11Q03067 99 aa3.68□□□□□ -1.82
RAT1YOR048C RPL33AP05744 107 aaKnown RBP3.68□□□□□ -1.82
RAT1YOR048C TOM6P33448 61 aa3.68□□□□□ -1.82
RAT1YOR048C RPL33BP41056 107 aaKnown RBP3.68□□□□□ -1.82
RAT1YOR048C YBR230W-AQ3E762 66 aa3.68□□□□□ -1.82
RAT1YOR048C BET1P22804 142 aa3.67□□□□□ -1.82
RAT1YOR048C YFL019CP43576 117 aa3.67□□□□□ -1.82
RAT1YOR048C YHR213W-BQ8TGK1 99 aa3.67□□□□□ -1.82
RAT1YOR048C FYV5P25585 152 aa3.66□□□□□ -1.82
RAT1YOR048C YHR007C-AQ07074 71 aa3.66□□□□□ -1.82
RAT1YOR048C Q0032Q9ZZX7 96 aa3.66□□□□□ -1.82
RAT1YOR048C AIM4P38305 123 aaPredicted RBP3.66□□□□□ -1.82
RAT1YOR048C SHH4Q06236 168 aa3.66□□□□□ -1.82
RAT1YOR048C YOR268CQ08734 132 aa3.66□□□□□ -1.82
RAT1YOR048C TSC3Q3E790 80 aa3.66□□□□□ -1.82
RAT1YOR048C UBC4P15731 148 aa3.65□□□□□ -1.82
RAT1YOR048C YBL039W-BP0C268 59 aa3.65□□□□□ -1.83
RAT1YOR048C RPL29P05747 59 aaPredicted RBP3.65□□□□□ -1.83
RAT1YOR048C ERG28P40030 148 aa3.65□□□□□ -1.83
RAT1YOR048C YBR126W-AQ8TGU7 68 aa3.65□□□□□ -1.83
RAT1YOR048C YIL102CP40488 101 aa3.64□□□□□ -1.83
RAT1YOR048C SPC1P46965 94 aa3.64□□□□□ -1.83
RAT1YOR048C BSC4P53841 131 aa3.64□□□□□ -1.83
RAT1YOR048C YPR195CQ06594 109 aa3.64□□□□□ -1.83
RAT1YOR048C CUP1-1P0CX80 61 aa3.64□□□□□ -1.83
RAT1YOR048C CUP1-2P0CX81 61 aa3.64□□□□□ -1.83
RAT1YOR048C YGL193CP53097 103 aa3.63□□□□□ -1.83
RAT1YOR048C GIS2P53849 153 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
RAT1YOR048C YJL133C-AQ3E7A3 74 aa3.63□□□□□ -1.83
RAT1YOR048C RSM19P53733 91 aaPredicted RBP3.61□□□□□ -1.83
RAT1YOR048C PEX22P39718 180 aa3.6□□□□□ -1.83
RAT1YOR048C YDL241WQ07738 123 aa3.6□□□□□ -1.83
RAT1YOR048C TDA8Q6B2U8 126 aa3.6□□□□□ -1.83
RAT1YOR048C RPL26AP05743 127 aaKnown RBP3.6□□□□□ -1.83
RAT1YOR048C AUA1P32450 94 aa3.6□□□□□ -1.83
RAT1YOR048C RPL26BP53221 127 aaKnown RBP3.6□□□□□ -1.83
RAT1YOR048C YDR010CQ12426 110 aa3.6□□□□□ -1.83
RAT1YOR048C YLR307C-AQ3E825 87 aa3.6□□□□□ -1.83
RAT1YOR048C RPL36BO14455 100 aaKnown RBP3.59□□□□□ -1.83
RAT1YOR048C YOL166W-AQ8TGJ1 51 aa3.59□□□□□ -1.83
RAT1YOR048C RTC6O14464 93 aa3.59□□□□□ -1.84
RAT1YOR048C EDC2P40023 145 aaPredicted RBP3.59□□□□□ -1.84
RAT1YOR048C DDR2P89113 61 aa3.59□□□□□ -1.84
RAT1YOR048C YPR010C-AA5Z2X5 72 aa3.58□□□□□ -1.84
RAT1YOR048C YNL042W-BQ3E7Z2 85 aa3.58□□□□□ -1.84
RAT1YOR048C YHL005CP38752 130 aa3.58□□□□□ -1.84
RAT1YOR048C LIP1Q03579 150 aa3.58□□□□□ -1.84
RAT1YOR048C YLR122CQ12312 125 aa3.58□□□□□ -1.84
RAT1YOR048C YOR314WQ12506 109 aa3.58□□□□□ -1.84
RAT1YOR048C RPS30AP0CX33 63 aaKnown RBP3.57□□□□□ -1.84
RAT1YOR048C RPS30BP0CX34 63 aaKnown RBP3.57□□□□□ -1.84
RAT1YOR048C COX23P38824 151 aa3.57□□□□□ -1.84
RAT1YOR048C YKL183C-AQ3E765 70 aa3.57□□□□□ -1.84
RAT1YOR048C KSH1Q8TGJ3 72 aa3.57□□□□□ -1.84
RAT1YOR048C STF1P01098 86 aa3.56□□□□□ -1.84
RAT1YOR048C YLR162WQ06235 118 aa3.56□□□□□ -1.84
RAT1YOR048C YEL045CP32616 141 aa3.56□□□□□ -1.84
RAT1YOR048C SFT1P43682 97 aa3.56□□□□□ -1.84
RAT1YOR048C MMS2P53152 137 aa3.56□□□□□ -1.84
RAT1YOR048C SBH1P52870 82 aa3.55□□□□□ -1.84
RAT1YOR048C ECM19Q06011 112 aa3.55□□□□□ -1.84
RAT1YOR048C YOR072WQ08486 104 aa3.55□□□□□ -1.84
RAT1YOR048C DYN1P36022 4092 aa3.55□□□□□ -1.84
RAT1YOR048C HOT13P36078 116 aa3.54□□□□□ -1.84
RAT1YOR048C MIC10Q96VH5 97 aa3.54□□□□□ -1.84
RAT1YOR048C YBR027CP38220 110 aa3.53□□□□□ -1.84
RAT1YOR048C YOR381W-AQ3E804 55 aa3.52□□□□□ -1.85
RAT1YOR048C SPT4P32914 102 aaPredicted RBP3.52□□□□□ -1.85
RAT1YOR048C YCR043CP25361 127 aa3.52□□□□□ -1.85
RAT1YOR048C YGR121W-AQ3E816 71 aa3.51□□□□□ -1.85
RAT1YOR048C YDR034C-AP0C289 58 aa3.51□□□□□ -1.85
RAT1YOR048C RPL36AP05745 100 aaPredicted RBP3.49□□□□□ -1.85
RAT1YOR048C YOL013W-AP0C272 63 aaPredicted RBP3.49□□□□□ -1.85
RAT1YOR048C YAR064WP39563 99 aa3.49□□□□□ -1.85
RAT1YOR048C LCL2Q08045 131 aa3.49□□□□□ -1.85
RAT1YOR048C MRP10O75012 95 aa3.48□□□□□ -1.85
RAT1YOR048C YMR122CQ03879 124 aa3.46□□□□□ -1.85
RAT1YOR048C YGL041C-BQ3E750 60 aa3.46□□□□□ -1.85
RAT1YOR048C YJL197C-AP0C5P0 93 aa3.46□□□□□ -1.86
RAT1YOR048C YDR182W-AQ3E796 67 aa3.44□□□□□ -1.86
RAT1YOR048C YPR153WQ06537 140 aa3.43□□□□□ -1.86
RAT1YOR048C YDL012CQ12489 107 aa3.43□□□□□ -1.86
RAT1YOR048C YBR121C-AP0C5L4 52 aa3.41□□□□□ -1.86
RAT1YOR048C YLR157W-DP0CE99 70 aa3.41□□□□□ -1.86
RAT1YOR048C YGL034CP53186 121 aa3.41□□□□□ -1.86
RAT1YOR048C HHF1P02309 103 aaKnown RBP3.41□□□□□ -1.86
RAT1YOR048C YHR125WP38831 101 aa3.4□□□□□ -1.86
RAT1YOR048C YJR128WP47162 119 aa3.39□□□□□ -1.87
RAT1YOR048C YER188C-AP0C0V2 99 aa3.39□□□□□ -1.87
RAT1YOR048C DDR48P18899 430 aaKnown RBP3.38□□□□□ -1.87
RAT1YOR048C YOR376W-AQ3E805 51 aa3.38□□□□□ -1.87
RAT1YOR048C OST5Q92316 86 aa3.38□□□□□ -1.87
RAT1YOR048C KTI11Q3E840 82 aa3.38□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms