RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W SPC1P46965 94 aa0.93□□□□□ -2.26
PEP12YOR036W PAU23Q07987 124 aa0.93□□□□□ -2.26
PEP12YOR036W PAU17Q12370 124 aa0.93□□□□□ -2.26
PEP12YOR036W NUP192P47054 1683 aa0.92□□□□□ -2.26
PEP12YOR036W SHU1P38751 150 aa0.92□□□□□ -2.26
PEP12YOR036W MPC2P38857 129 aa0.92□□□□□ -2.26
PEP12YOR036W MRX7P53869 86 aa0.92□□□□□ -2.26
PEP12YOR036W YDR381C-AQ3E6R5 114 aa0.92□□□□□ -2.26
PEP12YOR036W YOR034C-AQ3E735 80 aa0.92□□□□□ -2.26
PEP12YOR036W MHF2Q3E829 80 aa0.92□□□□□ -2.26
PEP12YOR036W VMR1P38735 1592 aa0.91□□□□□ -2.26
PEP12YOR036W YHR214C-DP0CX93 97 aa0.91□□□□□ -2.26
PEP12YOR036W SMX2P40204 77 aaKnown RBP0.91□□□□□ -2.26
PEP12YOR036W YDR246W-AQ3E763 66 aa0.91□□□□□ -2.26
PEP12YOR036W PAU1P0CE88 120 aa0.9□□□□□ -2.27
PEP12YOR036W PAU14P0CE89 120 aa0.9□□□□□ -2.27
PEP12YOR036W PAU8P0CE92 120 aa0.9□□□□□ -2.27
PEP12YOR036W PAU11P0CE93 120 aa0.9□□□□□ -2.27
PEP12YOR036W RPS11AP0CX47 156 aaKnown RBP0.9□□□□□ -2.27
PEP12YOR036W RPS11BP0CX48 156 aaKnown RBP0.9□□□□□ -2.27
PEP12YOR036W NHP2P32495 156 aaPredicted RBP0.9□□□□□ -2.27
PEP12YOR036W TIM12P32830 109 aa0.9□□□□□ -2.27
PEP12YOR036W TOM6P33448 61 aa0.9□□□□□ -2.27
PEP12YOR036W ATX1P38636 73 aa0.9□□□□□ -2.27
PEP12YOR036W PAU13P38725 120 aa0.9□□□□□ -2.27
PEP12YOR036W PAU10Q03050 120 aa0.9□□□□□ -2.27
PEP12YOR036W PAU20Q08322 120 aa0.9□□□□□ -2.27
PEP12YOR036W PAU9Q3E770 120 aa0.9□□□□□ -2.27
PEP12YOR036W YGR121W-AQ3E816 71 aa0.9□□□□□ -2.27
PEP12YOR036W YFL041W-AQ3E817 63 aa0.9□□□□□ -2.27
PEP12YOR036W BRR2P32639 2163 aaKnown RBP0.89□□□□□ -2.27
PEP12YOR036W PDX3P38075 228 aaKnown RBP0.89□□□□□ -2.27
PEP12YOR036W PAU4P53427 120 aa0.89□□□□□ -2.27
PEP12YOR036W YIL102C-AQ2V2P5 75 aa0.89□□□□□ -2.27
PEP12YOR036W SEC16P48415 2195 aaKnown RBP0.89□□□□□ -2.27
PEP12YOR036W YLR157W-EP0CF00 54 aa0.88□□□□□ -2.27
PEP12YOR036W YLR307C-AQ3E825 87 aa0.88□□□□□ -2.27
PEP12YOR036W YGR035W-AQ45U48 73 aa0.88□□□□□ -2.27
PEP12YOR036W YHR173CP38864 112 aa0.87□□□□□ -2.27
PEP12YOR036W BSC4P53841 131 aa0.87□□□□□ -2.27
PEP12YOR036W YOR343CQ12484 108 aa0.87□□□□□ -2.27
PEP12YOR036W YIL156W-BQ2V2P4 73 aa0.87□□□□□ -2.27
PEP12YOR036W YBR072C-AQ3E794 53 aa0.87□□□□□ -2.27
PEP12YOR036W YAL065CO13511 128 aa0.86□□□□□ -2.27
PEP12YOR036W YDL022C-AP0C5L6 82 aa0.86□□□□□ -2.27
PEP12YOR036W YBR032WP38223 100 aa0.86□□□□□ -2.27
PEP12YOR036W EDC1P53080 175 aaPredicted RBP0.86□□□□□ -2.27
PEP12YOR036W ERI1P62651 68 aaKnown RBP0.86□□□□□ -2.27
PEP12YOR036W URA2P07259 2214 aaKnown RBP0.86□□□□□ -2.27
PEP12YOR036W HKR1P41809 1802 aa0.86□□□□□ -2.27
PEP12YOR036W AUA1P32450 94 aa0.85□□□□□ -2.27
PEP12YOR036W FPR2P32472 135 aa0.85□□□□□ -2.27
PEP12YOR036W YOR105WQ08504 108 aa0.85□□□□□ -2.27
PEP12YOR036W YOR314WQ12506 109 aa0.85□□□□□ -2.27
PEP12YOR036W YOR032W-AQ8TGS1 66 aa0.85□□□□□ -2.27
PEP12YOR036W SPI1P40092 148 aa0.84□□□□□ -2.27
PEP12YOR036W QCR9P22289 66 aa0.83□□□□□ -2.28
PEP12YOR036W YDR010CQ12426 110 aa0.83□□□□□ -2.28
PEP12YOR036W YKL023C-AQ2V2P3 75 aa0.83□□□□□ -2.28
PEP12YOR036W YOR192C-CQ3E736 78 aa0.83□□□□□ -2.28
PEP12YOR036W YNL042W-BQ3E7Z2 85 aa0.83□□□□□ -2.28
PEP12YOR036W NOP10Q6Q547 58 aaPredicted RBP0.83□□□□□ -2.28
PEP12YOR036W YKL018C-AQ3E7A7 99 aa0.82□□□□□ -2.28
PEP12YOR036W POL2P21951 2222 aaKnown RBP0.82□□□□□ -2.28
PEP12YOR036W YSY6P38374 65 aa0.81□□□□□ -2.28
PEP12YOR036W YNL190WP53872 204 aa0.8□□□□□ -2.28
PEP12YOR036W YKL065W-AQ2V2P2 73 aa0.8□□□□□ -2.28
PEP12YOR036W YBR201C-AQ2V2Q3 67 aa0.8□□□□□ -2.28
PEP12YOR036W YMR122W-AQ3E842 84 aa0.8□□□□□ -2.28
PEP12YOR036W RPS30AP0CX33 63 aaKnown RBP0.79□□□□□ -2.28
PEP12YOR036W RPS30BP0CX34 63 aaKnown RBP0.79□□□□□ -2.28
PEP12YOR036W YOL166W-AQ8TGJ1 51 aa0.79□□□□□ -2.28
PEP12YOR036W Q0032Q9ZZX7 96 aa0.79□□□□□ -2.28
PEP12YOR036W BPH1P25356 2167 aa0.79□□□□□ -2.28
PEP12YOR036W COX7P10174 60 aa0.78□□□□□ -2.28
PEP12YOR036W RPC10P40422 70 aa0.78□□□□□ -2.28
PEP12YOR036W RPL38P49167 78 aaKnown RBP0.77□□□□□ -2.29
PEP12YOR036W PAU7P39545 55 aa0.76□□□□□ -2.29
PEP12YOR036W ATP18P81450 59 aa0.76□□□□□ -2.29
PEP12YOR036W YOL164W-AQ3E7A5 60 aa0.76□□□□□ -2.29
PEP12YOR036W ATP17Q06405 101 aa0.75□□□□□ -2.29
PEP12YOR036W YDR182W-AQ3E796 67 aa0.75□□□□□ -2.29
PEP12YOR036W BLM10P43583 2143 aa0.74□□□□□ -2.29
PEP12YOR036W YJR107C-AP0CT86 78 aa0.73□□□□□ -2.29
PEP12YOR036W YOL097W-AQ3E7Y9 61 aa0.73□□□□□ -2.29
PEP12YOR036W FLO1P32768 1537 aa0.73□□□□□ -2.29
PEP12YOR036W SGF11Q03067 99 aa0.72□□□□□ -2.29
PEP12YOR036W SDH6Q3E785 79 aa0.72□□□□□ -2.29
PEP12YOR036W COA2Q3E823 68 aa0.72□□□□□ -2.29
PEP12YOR036W YLR146W-AQ2V2P1 62 aa0.71□□□□□ -2.3
PEP12YOR036W PRP8P33334 2413 aaKnown RBP0.71□□□□□ -2.3
PEP12YOR036W RPS27AP35997 82 aaKnown RBP0.7□□□□□ -2.3
PEP12YOR036W YLR157W-DP0CE99 70 aa0.69□□□□□ -2.3
PEP12YOR036W RPS29BP41058 56 aaKnown RBP0.69□□□□□ -2.3
PEP12YOR036W YPR108W-AQ3E7B3 70 aa0.69□□□□□ -2.3
PEP12YOR036W SEN1Q00416 2231 aaKnown RBP0.69□□□□□ -2.3
PEP12YOR036W YPR010C-AA5Z2X5 72 aa0.68□□□□□ -2.3
PEP12YOR036W YBL039W-BP0C268 59 aa0.68□□□□□ -2.3
PEP12YOR036W YBR200W-AQ3E755 54 aa0.68□□□□□ -2.3
PEP12YOR036W YMR001C-AQ8TGS9 76 aa0.68□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms