RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W MSA2P36157 363 aa6.39□□□□□ -1.39
PRE6YOL038W BSC4P53841 131 aa6.39□□□□□ -1.39
PRE6YOL038W SPG1P50088 95 aa6.38□□□□□ -1.39
PRE6YOL038W YGR121W-AQ3E816 71 aa6.38□□□□□ -1.39
PRE6YOL038W KRE1P17260 313 aa6.37□□□□□ -1.39
PRE6YOL038W YJR085CP47131 105 aaKnown RBP6.37□□□□□ -1.39
PRE6YOL038W YHR007C-AQ07074 71 aa6.36□□□□□ -1.39
PRE6YOL038W TSC3Q3E790 80 aa6.36□□□□□ -1.39
PRE6YOL038W YHR139C-AO13536 103 aa6.35□□□□□ -1.39
PRE6YOL038W TMA7Q3E764 64 aaKnown RBP6.35□□□□□ -1.39
PRE6YOL038W DSE2P38844 325 aa6.34□□□□□ -1.39
PRE6YOL038W YOR072WQ08486 104 aa6.34□□□□□ -1.39
PRE6YOL038W RPL36BO14455 100 aaKnown RBP6.33□□□□□ -1.4
PRE6YOL038W YJR107C-AP0CT86 78 aa6.33□□□□□ -1.4
PRE6YOL038W DUT1P33317 147 aa6.33□□□□□ -1.4
PRE6YOL038W HOT13P36078 116 aa6.33□□□□□ -1.4
PRE6YOL038W OST2P46964 130 aa6.33□□□□□ -1.4
PRE6YOL038W YMR230W-AQ3E7B5 62 aa6.33□□□□□ -1.4
PRE6YOL038W YAR1P46683 200 aa6.32□□□□□ -1.4
PRE6YOL038W KTI11Q3E840 82 aa6.32□□□□□ -1.4
PRE6YOL038W ATP18P81450 59 aa6.25□□□□□ -1.41
PRE6YOL038W CMC4Q3E7A9 73 aa6.25□□□□□ -1.41
PRE6YOL038W KSH1Q8TGJ3 72 aa6.24□□□□□ -1.41
PRE6YOL038W YBR027CP38220 110 aa6.23□□□□□ -1.41
PRE6YOL038W YFR009W-AP0C5M9 85 aa6.19□□□□□ -1.42
PRE6YOL038W PBI2P0CT04 75 aaKnown RBP6.19□□□□□ -1.42
PRE6YOL038W RPA12P32529 125 aaKnown RBP6.19□□□□□ -1.42
PRE6YOL038W YNL184CP53876 108 aa6.19□□□□□ -1.42
PRE6YOL038W RSM18P40033 138 aa6.18□□□□□ -1.42
PRE6YOL038W TDA8Q6B2U8 126 aa6.16□□□□□ -1.42
PRE6YOL038W YHR213W-BQ8TGK1 99 aa6.16□□□□□ -1.42
PRE6YOL038W ICS3P47034 131 aa6.14□□□□□ -1.43
PRE6YOL038W RSM19P53733 91 aaPredicted RBP6.14□□□□□ -1.43
PRE6YOL038W YCR085WP25650 117 aa6.13□□□□□ -1.43
PRE6YOL038W ATX1P38636 73 aa6.13□□□□□ -1.43
PRE6YOL038W YDR381C-AQ3E6R5 114 aa6.13□□□□□ -1.43
PRE6YOL038W YJL133C-AQ3E7A3 74 aa6.12□□□□□ -1.43
PRE6YOL038W ISD11Q6Q560 94 aa6.12□□□□□ -1.43
PRE6YOL038W YLR157W-DP0CE99 70 aa6.11□□□□□ -1.43
PRE6YOL038W TDA2P40045 126 aa6.1□□□□□ -1.43
PRE6YOL038W RPL38P49167 78 aaKnown RBP6.1□□□□□ -1.43
PRE6YOL038W YLR162WQ06235 118 aa6.09□□□□□ -1.43
PRE6YOL038W SHH4Q06236 168 aa6.09□□□□□ -1.43
PRE6YOL038W RPL37BP51402 88 aaKnown RBP6.08□□□□□ -1.44
PRE6YOL038W YHL018WP38744 120 aaPredicted RBP6.07□□□□□ -1.44
PRE6YOL038W COX23P38824 151 aa6.07□□□□□ -1.44
PRE6YOL038W ECM19Q06011 112 aa6.07□□□□□ -1.44
PRE6YOL038W MIC10Q96VH5 97 aa6.07□□□□□ -1.44
PRE6YOL038W YAL063C-AQ3E791 96 aa6.06□□□□□ -1.44
PRE6YOL038W YOL097W-AQ3E7Y9 61 aa6.06□□□□□ -1.44
PRE6YOL038W RAD6P06104 172 aa6.04□□□□□ -1.44
PRE6YOL038W INO4P13902 151 aa6.04□□□□□ -1.44
PRE6YOL038W SKI6P46948 246 aaPredicted RBP6.04□□□□□ -1.44
PRE6YOL038W EDC1P53080 175 aaPredicted RBP6.04□□□□□ -1.44
PRE6YOL038W YBR182C-AQ8TGU6 64 aa6.04□□□□□ -1.44
PRE6YOL038W YHL042WP38729 150 aa6.03□□□□□ -1.44
PRE6YOL038W YHL005CP38752 130 aa6.03□□□□□ -1.44
PRE6YOL038W COF1Q03048 143 aaKnown RBP6.03□□□□□ -1.44
PRE6YOL038W YOR304C-AO14468 76 aa6.02□□□□□ -1.45
PRE6YOL038W RPP2AP05319 106 aaKnown RBP6.01□□□□□ -1.45
PRE6YOL038W YEL045CP32616 141 aa6.01□□□□□ -1.45
PRE6YOL038W EMC6Q12431 108 aa5.99□□□□□ -1.45
PRE6YOL038W YOL014WQ08110 124 aa5.98□□□□□ -1.45
PRE6YOL038W ATP20Q12233 115 aa5.98□□□□□ -1.45
PRE6YOL038W COX7P10174 60 aa5.96□□□□□ -1.46
PRE6YOL038W SLO1Q3E784 85 aa5.96□□□□□ -1.46
PRE6YOL038W YCR043CP25361 127 aa5.95□□□□□ -1.46
PRE6YOL038W YCR050CP25630 102 aa5.94□□□□□ -1.46
PRE6YOL038W YNL122CP53921 115 aaPredicted RBP5.94□□□□□ -1.46
PRE6YOL038W YLR285C-AQ3E771 56 aa5.91□□□□□ -1.46
PRE6YOL038W YKL069WP36088 180 aa5.88□□□□□ -1.47
PRE6YOL038W YSY6P38374 65 aa5.87□□□□□ -1.47
PRE6YOL038W YFL041W-AQ3E817 63 aa5.86□□□□□ -1.47
PRE6YOL038W RPL36AP05745 100 aaPredicted RBP5.85□□□□□ -1.47
PRE6YOL038W YAR064WP39563 99 aa5.85□□□□□ -1.47
PRE6YOL038W YFL065CP43539 102 aa5.81□□□□□ -1.48
PRE6YOL038W YPR203WQ08994 102 aa5.81□□□□□ -1.48
PRE6YOL038W YKL183C-AQ3E765 70 aa5.81□□□□□ -1.48
PRE6YOL038W RUB1Q03919 77 aa5.8□□□□□ -1.48
PRE6YOL038W YLR361C-AQ3E795 98 aa5.8□□□□□ -1.48
PRE6YOL038W YER187WP40102 141 aa5.79□□□□□ -1.48
PRE6YOL038W YHR073W-AP0C5N7 58 aa5.77□□□□□ -1.49
PRE6YOL038W YPL080CQ02826 108 aa5.73□□□□□ -1.49
PRE6YOL038W YDL012CQ12489 107 aa5.73□□□□□ -1.49
PRE6YOL038W YPR153WQ06537 140 aa5.71□□□□□ -1.5
PRE6YOL038W YOR314WQ12506 109 aa5.7□□□□□ -1.5
PRE6YOL038W YGR039WP53225 103 aa5.69□□□□□ -1.5
PRE6YOL038W YIL102CP40488 101 aa5.67□□□□□ -1.5
PRE6YOL038W HHF1P02309 103 aaKnown RBP5.66□□□□□ -1.5
PRE6YOL038W YOR316C-AQ3E806 69 aa5.64□□□□□ -1.51
PRE6YOL038W YOL013W-AP0C272 63 aaPredicted RBP5.63□□□□□ -1.51
PRE6YOL038W YGR164WP53291 111 aa5.63□□□□□ -1.51
PRE6YOL038W LIP1Q03579 150 aa5.61□□□□□ -1.51
PRE6YOL038W NOP10Q6Q547 58 aaPredicted RBP5.61□□□□□ -1.51
PRE6YOL038W YJR128WP47162 119 aa5.57□□□□□ -1.52
PRE6YOL038W YPL038W-AQ3E7B4 63 aa5.57□□□□□ -1.52
PRE6YOL038W YDR119W-AQ2V2P9 66 aa5.56□□□□□ -1.52
PRE6YOL038W FYV12Q08559 129 aa5.53□□□□□ -1.52
PRE6YOL038W YJL144WP47009 104 aa5.51□□□□□ -1.53
PRE6YOL038W AIM4P38305 123 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms