RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W YOR314WQ12506 109 aa2.74□□□□□ -1.97
VPS36YLR417W BEM2P39960 2167 aaKnown RBP2.74□□□□□ -1.97
VPS36YLR417W SEC16P48415 2195 aaKnown RBP2.74□□□□□ -1.97
VPS36YLR417W YAL065CO13511 128 aa2.73□□□□□ -1.97
VPS36YLR417W ATP18P81450 59 aa2.73□□□□□ -1.97
VPS36YLR417W SED1Q01589 338 aa2.73□□□□□ -1.97
VPS36YLR417W TDA2P40045 126 aa2.72□□□□□ -1.97
VPS36YLR417W YFR035CP43608 114 aa2.72□□□□□ -1.97
VPS36YLR417W SFT1P43682 97 aa2.72□□□□□ -1.97
VPS36YLR417W ICY1Q04329 127 aa2.72□□□□□ -1.97
VPS36YLR417W YKL065W-AQ2V2P2 73 aa2.72□□□□□ -1.97
VPS36YLR417W YDR246W-AQ3E763 66 aa2.72□□□□□ -1.97
VPS36YLR417W BRR2P32639 2163 aaKnown RBP2.72□□□□□ -1.97
VPS36YLR417W RPL36BO14455 100 aaKnown RBP2.71□□□□□ -1.98
VPS36YLR417W RPL36AP05745 100 aaPredicted RBP2.71□□□□□ -1.98
VPS36YLR417W YDL241WQ07738 123 aa2.71□□□□□ -1.98
VPS36YLR417W RPL29P05747 59 aaPredicted RBP2.71□□□□□ -1.98
VPS36YLR417W LIP1Q03579 150 aa2.71□□□□□ -1.98
VPS36YLR417W YCL048W-AQ2V2Q2 79 aa2.71□□□□□ -1.98
VPS36YLR417W YOR011W-AQ3E807 68 aa2.71□□□□□ -1.98
VPS36YLR417W YLL006W-AQ3E814 58 aa2.71□□□□□ -1.98
VPS36YLR417W SEN1Q00416 2231 aaKnown RBP2.7□□□□□ -1.98
VPS36YLR417W RSM18P40033 138 aa2.7□□□□□ -1.98
VPS36YLR417W VAM10Q08474 114 aa2.7□□□□□ -1.98
VPS36YLR417W ERI1P62651 68 aaKnown RBP2.69□□□□□ -1.98
VPS36YLR417W RPL38P49167 78 aaKnown RBP2.68□□□□□ -1.98
VPS36YLR417W YOR034C-AQ3E735 80 aa2.68□□□□□ -1.98
VPS36YLR417W NOP10Q6Q547 58 aaPredicted RBP2.68□□□□□ -1.98
VPS36YLR417W YGR025WP53216 100 aa2.68□□□□□ -1.98
VPS36YLR417W YMR122W-AQ3E842 84 aa2.68□□□□□ -1.98
VPS36YLR417W YHL005CP38752 130 aa2.67□□□□□ -1.98
VPS36YLR417W YFR009W-AP0C5M9 85 aa2.66□□□□□ -1.98
VPS36YLR417W RPS11AP0CX47 156 aaKnown RBP2.66□□□□□ -1.98
VPS36YLR417W RPS11BP0CX48 156 aaKnown RBP2.66□□□□□ -1.98
VPS36YLR417W HOR7Q05827 59 aa2.66□□□□□ -1.98
VPS36YLR417W YGR240C-AQ3E786 66 aa2.66□□□□□ -1.98
VPS36YLR417W MIC10Q96VH5 97 aa2.66□□□□□ -1.98
VPS36YLR417W DDR48P18899 430 aaKnown RBP2.65□□□□□ -1.98
VPS36YLR417W YIR020CP40575 100 aa2.65□□□□□ -1.98
VPS36YLR417W ICS3P47034 131 aa2.65□□□□□ -1.98
VPS36YLR417W COX23P38824 151 aa2.65□□□□□ -1.99
VPS36YLR417W MVB12P42939 101 aa2.65□□□□□ -1.99
VPS36YLR417W EDC1P53080 175 aaPredicted RBP2.65□□□□□ -1.99
VPS36YLR417W HUB1Q6Q546 73 aa2.65□□□□□ -1.99
VPS36YLR417W YOL166W-AQ8TGJ1 51 aa2.65□□□□□ -1.99
VPS36YLR417W YPR010C-AA5Z2X5 72 aa2.64□□□□□ -1.99
VPS36YLR417W FYV5P25585 152 aa2.64□□□□□ -1.99
VPS36YLR417W YLR307C-AQ3E825 87 aa2.64□□□□□ -1.99
VPS36YLR417W OST5Q92316 86 aa2.64□□□□□ -1.99
VPS36YLR417W YBL039W-BP0C268 59 aa2.63□□□□□ -1.99
VPS36YLR417W RPC10P40422 70 aa2.63□□□□□ -1.99
VPS36YLR417W YGR121W-AQ3E816 71 aa2.63□□□□□ -1.99
VPS36YLR417W SPC1P46965 94 aa2.62□□□□□ -1.99
VPS36YLR417W YMR122CQ03879 124 aa2.62□□□□□ -1.99
VPS36YLR417W YER188C-AP0C0V2 99 aa2.62□□□□□ -1.99
VPS36YLR417W RPS30AP0CX33 63 aaKnown RBP2.62□□□□□ -1.99
VPS36YLR417W RPS30BP0CX34 63 aaKnown RBP2.62□□□□□ -1.99
VPS36YLR417W YGR035W-AQ45U48 73 aa2.62□□□□□ -1.99
VPS36YLR417W TAO3P40468 2376 aa2.61□□□□□ -1.99
VPS36YLR417W AQY2P0CD90 149 aa2.61□□□□□ -1.99
VPS36YLR417W SPG1P50088 95 aa2.61□□□□□ -1.99
VPS36YLR417W RRT15Q3E811 62 aa2.6□□□□□ -1.99
VPS36YLR417W YHR213W-BQ8TGK1 99 aa2.6□□□□□ -1.99
VPS36YLR417W YJL127C-BQ3E828 52 aa2.59□□□□□ -1.99
VPS36YLR417W YOL013W-AP0C272 63 aaPredicted RBP2.59□□□□□ -2
VPS36YLR417W BPH1P25356 2167 aa2.58□□□□□ -2
VPS36YLR417W YIL102CP40488 101 aa2.58□□□□□ -2
VPS36YLR417W YBR230W-AQ3E762 66 aa2.58□□□□□ -2
VPS36YLR417W SDH6Q3E785 79 aa2.58□□□□□ -2
VPS36YLR417W YJL133C-AQ3E7A3 74 aa2.58□□□□□ -2
VPS36YLR417W YPR153WQ06537 140 aa2.57□□□□□ -2
VPS36YLR417W YNL042W-BQ3E7Z2 85 aa2.57□□□□□ -2
VPS36YLR417W YDR034W-BQ6Q5X2 51 aa2.56□□□□□ -2
VPS36YLR417W TAR1Q8TGM6 124 aa2.56□□□□□ -2
VPS36YLR417W RPL33AP05744 107 aaKnown RBP2.55□□□□□ -2
VPS36YLR417W YCR001WP25347 104 aa2.55□□□□□ -2
VPS36YLR417W YCR095W-AQ3E787 52 aa2.55□□□□□ -2
VPS36YLR417W YMR001C-AQ8TGS9 76 aa2.55□□□□□ -2
VPS36YLR417W HFA1P32874 2273 aa2.55□□□□□ -2
VPS36YLR417W DDR2P89113 61 aa2.54□□□□□ -2
VPS36YLR417W YGL041C-BQ3E750 60 aa2.54□□□□□ -2
VPS36YLR417W Q0032Q9ZZX7 96 aa2.54□□□□□ -2
VPS36YLR417W YLR157W-DP0CE99 70 aa2.53□□□□□ -2
VPS36YLR417W YAL064WP39711 94 aa2.53□□□□□ -2
VPS36YLR417W SGF11Q03067 99 aa2.53□□□□□ -2
VPS36YLR417W YHR212W-AP0CX91 67 aa2.52□□□□□ -2.01
VPS36YLR417W YCL042WP25572 119 aa2.52□□□□□ -2.01
VPS36YLR417W YAR064WP39563 99 aa2.51□□□□□ -2.01
VPS36YLR417W YOR072WQ08486 104 aa2.51□□□□□ -2.01
VPS36YLR417W SOM1Q05676 74 aa2.51□□□□□ -2.01
VPS36YLR417W ATP17Q06405 101 aa2.51□□□□□ -2.01
VPS36YLR417W TOM1Q03280 3268 aa2.5□□□□□ -2.01
VPS36YLR417W RTC6O14464 93 aa2.5□□□□□ -2.01
VPS36YLR417W YGL149WP53116 101 aa2.49□□□□□ -2.01
VPS36YLR417W YOR376W-AQ3E805 51 aa2.49□□□□□ -2.01
VPS36YLR417W YBR027CP38220 110 aa2.48□□□□□ -2.01
VPS36YLR417W AUA1P32450 94 aa2.48□□□□□ -2.01
VPS36YLR417W QCR10P37299 77 aa2.48□□□□□ -2.01
VPS36YLR417W BSC4P53841 131 aa2.48□□□□□ -2.01
VPS36YLR417W SNA2P56508 79 aa2.46□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 106.7 ms