RNA–Protein interactions for RNA: YLR411W

CTR3, Transcript of High-affinity copper transporter of the plasma membrane, yeastyeast

Gene CTR3, Length 726 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTR3YLR411W YFR009W-AP0C5M9 85 aa3.63□□□□□ -1.83
CTR3YLR411W AQY2P0CD90 149 aa3.63□□□□□ -1.83
CTR3YLR411W YRA2P36036 203 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
CTR3YLR411W YER187WP40102 141 aa3.63□□□□□ -1.83
CTR3YLR411W SMD1Q02260 146 aaPredicted RBP3.63□□□□□ -1.83
CTR3YLR411W YLR156WP0CE96 114 aa3.62□□□□□ -1.83
CTR3YLR411W YLR159WP0CE97 114 aa3.62□□□□□ -1.83
CTR3YLR411W YLR161WP0CE98 114 aa3.62□□□□□ -1.83
CTR3YLR411W RPL43AP0CX25 92 aaKnown RBP3.62□□□□□ -1.83
CTR3YLR411W RPL43BP0CX26 92 aa3.62□□□□□ -1.83
CTR3YLR411W YCR001WP25347 104 aa3.62□□□□□ -1.83
CTR3YLR411W FYV5P25585 152 aa3.62□□□□□ -1.83
CTR3YLR411W TDA2P40045 126 aa3.62□□□□□ -1.83
CTR3YLR411W YMR320WQ04897 101 aa3.62□□□□□ -1.83
CTR3YLR411W YGR035W-AQ45U48 73 aa3.62□□□□□ -1.83
CTR3YLR411W SBH1P52870 82 aa3.6□□□□□ -1.83
CTR3YLR411W YOR314WQ12506 109 aa3.6□□□□□ -1.83
CTR3YLR411W YDR246W-AQ3E763 66 aa3.6□□□□□ -1.83
CTR3YLR411W YDR182W-AQ3E796 67 aa3.6□□□□□ -1.83
CTR3YLR411W YLR307C-AQ3E825 87 aa3.6□□□□□ -1.83
CTR3YLR411W PEX22P39718 180 aa3.59□□□□□ -1.83
CTR3YLR411W RSM18P40033 138 aa3.59□□□□□ -1.83
CTR3YLR411W ATP20Q12233 115 aa3.59□□□□□ -1.83
CTR3YLR411W KTI11Q3E840 82 aa3.59□□□□□ -1.83
CTR3YLR411W YER039C-AP0CD97 72 aa3.58□□□□□ -1.84
CTR3YLR411W YCR050CP25630 102 aa3.58□□□□□ -1.84
CTR3YLR411W COX23P38824 151 aa3.58□□□□□ -1.84
CTR3YLR411W EDC2P40023 145 aaPredicted RBP3.58□□□□□ -1.84
CTR3YLR411W YDR115WQ04598 105 aa3.58□□□□□ -1.84
CTR3YLR411W YBR230W-AQ3E762 66 aa3.58□□□□□ -1.84
CTR3YLR411W YNL042W-BQ3E7Z2 85 aa3.58□□□□□ -1.84
CTR3YLR411W YJL127C-BQ3E828 52 aa3.58□□□□□ -1.84
CTR3YLR411W URA2P07259 2214 aaKnown RBP3.58□□□□□ -1.84
CTR3YLR411W RTC6O14464 93 aa3.57□□□□□ -1.84
CTR3YLR411W AIM4P38305 123 aaPredicted RBP3.57□□□□□ -1.84
CTR3YLR411W YAL064WP39711 94 aa3.57□□□□□ -1.84
CTR3YLR411W ICS3P47034 131 aa3.57□□□□□ -1.84
CTR3YLR411W EDC1P53080 175 aaPredicted RBP3.57□□□□□ -1.84
CTR3YLR411W TRA1P38811 3744 aa3.57□□□□□ -1.84
CTR3YLR411W YBL081WP38180 368 aaKnown RBP3.56□□□□□ -1.84
CTR3YLR411W RPL38P49167 78 aaKnown RBP3.56□□□□□ -1.84
CTR3YLR411W YGL041C-BQ3E750 60 aa3.56□□□□□ -1.84
CTR3YLR411W BET1P22804 142 aa3.55□□□□□ -1.84
CTR3YLR411W YLL066W-BQ8TGJ7 56 aa3.55□□□□□ -1.84
CTR3YLR411W RPL36BO14455 100 aaKnown RBP3.54□□□□□ -1.84
CTR3YLR411W RPL36AP05745 100 aaPredicted RBP3.54□□□□□ -1.84
CTR3YLR411W SPT4P32914 102 aaPredicted RBP3.54□□□□□ -1.84
CTR3YLR411W YGR164WP53291 111 aa3.54□□□□□ -1.84
CTR3YLR411W YLR412C-AQ3E742 68 aa3.54□□□□□ -1.84
CTR3YLR411W YHR213W-BQ8TGK1 99 aa3.54□□□□□ -1.84
CTR3YLR411W RPS28BP0C0X0 67 aaKnown RBP3.53□□□□□ -1.84
CTR3YLR411W RPS28AQ3E7X9 67 aaPredicted RBP3.53□□□□□ -1.84
CTR3YLR411W TDA8Q6B2U8 126 aa3.53□□□□□ -1.84
CTR3YLR411W NOP10Q6Q547 58 aaPredicted RBP3.52□□□□□ -1.85
CTR3YLR411W Q0032Q9ZZX7 96 aa3.52□□□□□ -1.85
CTR3YLR411W YBR121C-AP0C5L4 52 aa3.51□□□□□ -1.85
CTR3YLR411W YJL133C-AQ3E7A3 74 aa3.51□□□□□ -1.85
CTR3YLR411W YOL166W-AQ8TGJ1 51 aa3.5□□□□□ -1.85
CTR3YLR411W YAR023CD6VPM8 179 aa3.49□□□□□ -1.85
CTR3YLR411W YGL193CP53097 103 aa3.49□□□□□ -1.85
CTR3YLR411W ECM19Q06011 112 aa3.49□□□□□ -1.85
CTR3YLR411W YOL014WQ08110 124 aa3.49□□□□□ -1.85
CTR3YLR411W PRP8P33334 2413 aaKnown RBP3.49□□□□□ -1.85
CTR3YLR411W SNA2P56508 79 aa3.47□□□□□ -1.85
CTR3YLR411W YLR162WQ06235 118 aa3.47□□□□□ -1.85
CTR3YLR411W YOR072WQ08486 104 aa3.47□□□□□ -1.85
CTR3YLR411W YKL065W-AQ2V2P2 73 aa3.47□□□□□ -1.85
CTR3YLR411W KSH1Q8TGJ3 72 aa3.47□□□□□ -1.85
CTR3YLR411W DDR2P89113 61 aa3.46□□□□□ -1.86
CTR3YLR411W MEC1P38111 2368 aa3.46□□□□□ -1.86
CTR3YLR411W YCL042WP25572 119 aa3.45□□□□□ -1.86
CTR3YLR411W YHL005CP38752 130 aa3.45□□□□□ -1.86
CTR3YLR411W MIC10Q96VH5 97 aa3.45□□□□□ -1.86
CTR3YLR411W LIP1Q03579 150 aa3.44□□□□□ -1.86
CTR3YLR411W RRT15Q3E811 62 aa3.44□□□□□ -1.86
CTR3YLR411W YOL013W-AP0C272 63 aaPredicted RBP3.43□□□□□ -1.86
CTR3YLR411W BSC4P53841 131 aa3.43□□□□□ -1.86
CTR3YLR411W YHR007C-AQ07074 71 aa3.43□□□□□ -1.86
CTR3YLR411W YGR121W-AQ3E816 71 aa3.43□□□□□ -1.86
CTR3YLR411W YAL067W-AQ8TGK6 75 aa3.43□□□□□ -1.86
CTR3YLR411W YJL197C-AP0C5P0 93 aa3.42□□□□□ -1.86
CTR3YLR411W RPS30AP0CX33 63 aaKnown RBP3.4□□□□□ -1.87
CTR3YLR411W RPS30BP0CX34 63 aaKnown RBP3.4□□□□□ -1.87
CTR3YLR411W AUA1P32450 94 aa3.4□□□□□ -1.87
CTR3YLR411W YAR064WP39563 99 aa3.4□□□□□ -1.87
CTR3YLR411W HUB1Q6Q546 73 aa3.4□□□□□ -1.87
CTR3YLR411W YIL102CP40488 101 aa3.39□□□□□ -1.87
CTR3YLR411W SPG1P50088 95 aa3.38□□□□□ -1.87
CTR3YLR411W TEL1P38110 2787 aa3.38□□□□□ -1.87
CTR3YLR411W YHR125WP38831 101 aa3.37□□□□□ -1.87
CTR3YLR411W YOL097W-AQ3E7Y9 61 aa3.37□□□□□ -1.87
CTR3YLR411W YMR122CQ03879 124 aa3.36□□□□□ -1.87
CTR3YLR411W YNL277W-AQ3E7Z0 62 aa3.36□□□□□ -1.87
CTR3YLR411W YOR381W-AQ3E804 55 aa3.36□□□□□ -1.87
CTR3YLR411W YLR157W-DP0CE99 70 aa3.35□□□□□ -1.87
CTR3YLR411W SDH6Q3E785 79 aa3.35□□□□□ -1.87
CTR3YLR411W YDR034C-AP0C289 58 aa3.34□□□□□ -1.87
CTR3YLR411W YER188C-AP0C0V2 99 aa3.33□□□□□ -1.88
CTR3YLR411W YPR195CQ06594 109 aa3.33□□□□□ -1.88
CTR3YLR411W OST5Q92316 86 aa3.33□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 117.1 ms