RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W OST2P46964 130 aa6.38□□□□□ -1.39
SHH4YLR164W ATP18P81450 59 aa6.37□□□□□ -1.39
SHH4YLR164W YFR009W-AP0C5M9 85 aa6.36□□□□□ -1.39
SHH4YLR164W EDC2P40023 145 aaPredicted RBP6.36□□□□□ -1.39
SHH4YLR164W YOR072WQ08486 104 aa6.34□□□□□ -1.39
SHH4YLR164W YGR121W-AQ3E816 71 aa6.34□□□□□ -1.39
SHH4YLR164W RPL36BO14455 100 aaKnown RBP6.33□□□□□ -1.4
SHH4YLR164W YBL112CQ3E7Y4 105 aa6.33□□□□□ -1.4
SHH4YLR164W YLR415CO13578 112 aa6.32□□□□□ -1.4
SHH4YLR164W PBI2P0CT04 75 aaKnown RBP6.32□□□□□ -1.4
SHH4YLR164W SFT1P43682 97 aa6.32□□□□□ -1.4
SHH4YLR164W EDC1P53080 175 aaPredicted RBP6.32□□□□□ -1.4
SHH4YLR164W YDR381C-AQ3E6R5 114 aa6.32□□□□□ -1.4
SHH4YLR164W YHR139C-AO13536 103 aa6.29□□□□□ -1.4
SHH4YLR164W ATX1P38636 73 aa6.29□□□□□ -1.4
SHH4YLR164W RSM18P40033 138 aa6.29□□□□□ -1.4
SHH4YLR164W SPG1P50088 95 aa6.29□□□□□ -1.4
SHH4YLR164W TSC3Q3E790 80 aa6.29□□□□□ -1.4
SHH4YLR164W INO4P13902 151 aa6.28□□□□□ -1.4
SHH4YLR164W KRE1P17260 313 aa6.28□□□□□ -1.4
SHH4YLR164W YFL067WP43537 175 aa6.28□□□□□ -1.4
SHH4YLR164W YJR085CP47131 105 aaKnown RBP6.28□□□□□ -1.4
SHH4YLR164W YOR268CQ08734 132 aa6.28□□□□□ -1.4
SHH4YLR164W YBR027CP38220 110 aa6.27□□□□□ -1.41
SHH4YLR164W YGL149WP53116 101 aa6.27□□□□□ -1.41
SHH4YLR164W ICS3P47034 131 aa6.25□□□□□ -1.41
SHH4YLR164W TDA8Q6B2U8 126 aa6.24□□□□□ -1.41
SHH4YLR164W YHR213W-BQ8TGK1 99 aa6.24□□□□□ -1.41
SHH4YLR164W YNL184CP53876 108 aa6.23□□□□□ -1.41
SHH4YLR164W YJL197C-AP0C5P0 93 aa6.22□□□□□ -1.41
SHH4YLR164W YCR085WP25650 117 aa6.22□□□□□ -1.41
SHH4YLR164W YAR1P46683 200 aa6.22□□□□□ -1.41
SHH4YLR164W SKI6P46948 246 aaPredicted RBP6.22□□□□□ -1.41
SHH4YLR164W SLO1Q3E784 85 aa6.22□□□□□ -1.41
SHH4YLR164W SHH4Q06236 168 aa6.21□□□□□ -1.42
SHH4YLR164W YOL014WQ08110 124 aa6.21□□□□□ -1.42
SHH4YLR164W RSM19P53733 91 aaPredicted RBP6.2□□□□□ -1.42
SHH4YLR164W YAL063C-AQ3E791 96 aa6.2□□□□□ -1.42
SHH4YLR164W YJL133C-AQ3E7A3 74 aa6.2□□□□□ -1.42
SHH4YLR164W RAD6P06104 172 aa6.19□□□□□ -1.42
SHH4YLR164W RPL38P49167 78 aaKnown RBP6.18□□□□□ -1.42
SHH4YLR164W YDR010CQ12426 110 aa6.18□□□□□ -1.42
SHH4YLR164W COX23P38824 151 aa6.17□□□□□ -1.42
SHH4YLR164W ECM19Q06011 112 aa6.17□□□□□ -1.42
SHH4YLR164W YLR162WQ06235 118 aa6.15□□□□□ -1.42
SHH4YLR164W MIC10Q96VH5 97 aa6.15□□□□□ -1.42
SHH4YLR164W YEL045CP32616 141 aa6.14□□□□□ -1.43
SHH4YLR164W RUB1Q03919 77 aa6.14□□□□□ -1.43
SHH4YLR164W ISD11Q6Q560 94 aa6.14□□□□□ -1.43
SHH4YLR164W HOT13P36078 116 aa6.13□□□□□ -1.43
SHH4YLR164W TDA2P40045 126 aa6.11□□□□□ -1.43
SHH4YLR164W YFL065CP43539 102 aa6.1□□□□□ -1.43
SHH4YLR164W YPR203WQ08994 102 aa6.1□□□□□ -1.43
SHH4YLR164W COF1Q03048 143 aaKnown RBP6.09□□□□□ -1.43
SHH4YLR164W YFL041W-AQ3E817 63 aa6.09□□□□□ -1.43
SHH4YLR164W RPP2AP05319 106 aaKnown RBP6.08□□□□□ -1.44
SHH4YLR164W EMC6Q12431 108 aa6.06□□□□□ -1.44
SHH4YLR164W ATP20Q12233 115 aa6.05□□□□□ -1.44
SHH4YLR164W YLR285C-AQ3E771 56 aa6.05□□□□□ -1.44
SHH4YLR164W KTI11Q3E840 82 aa6.04□□□□□ -1.44
SHH4YLR164W YOL097W-AQ3E7Y9 61 aa6.03□□□□□ -1.44
SHH4YLR164W KSH1Q8TGJ3 72 aa6.03□□□□□ -1.44
SHH4YLR164W YHL042WP38729 150 aa6.02□□□□□ -1.45
SHH4YLR164W YLR157W-DP0CE99 70 aa6.01□□□□□ -1.45
SHH4YLR164W YCR043CP25361 127 aa6.01□□□□□ -1.45
SHH4YLR164W YSY6P38374 65 aa5.99□□□□□ -1.45
SHH4YLR164W YCR050CP25630 102 aa5.97□□□□□ -1.45
SHH4YLR164W YHL005CP38752 130 aa5.95□□□□□ -1.46
SHH4YLR164W YHL018WP38744 120 aaPredicted RBP5.92□□□□□ -1.46
SHH4YLR164W YPL080CQ02826 108 aa5.92□□□□□ -1.46
SHH4YLR164W YDL012CQ12489 107 aa5.92□□□□□ -1.46
SHH4YLR164W YDR119W-AQ2V2P9 66 aa5.92□□□□□ -1.46
SHH4YLR164W YBR182C-AQ8TGU6 64 aa5.92□□□□□ -1.46
SHH4YLR164W YAR064WP39563 99 aa5.91□□□□□ -1.46
SHH4YLR164W RPL36AP05745 100 aaPredicted RBP5.87□□□□□ -1.47
SHH4YLR164W YOR304C-AO14468 76 aa5.86□□□□□ -1.47
SHH4YLR164W YGR039WP53225 103 aa5.86□□□□□ -1.47
SHH4YLR164W YDR246W-AQ3E763 66 aa5.83□□□□□ -1.48
SHH4YLR164W YKL183C-AQ3E765 70 aa5.83□□□□□ -1.48
SHH4YLR164W NOP10Q6Q547 58 aaPredicted RBP5.82□□□□□ -1.48
SHH4YLR164W YLR361C-AQ3E795 98 aa5.81□□□□□ -1.48
SHH4YLR164W YPL038W-AQ3E7B4 63 aa5.8□□□□□ -1.48
SHH4YLR164W YHR073W-AP0C5N7 58 aa5.79□□□□□ -1.48
SHH4YLR164W YPR153WQ06537 140 aa5.79□□□□□ -1.48
SHH4YLR164W YOR314WQ12506 109 aa5.78□□□□□ -1.48
SHH4YLR164W COX7P10174 60 aa5.77□□□□□ -1.49
SHH4YLR164W YNL122CP53921 115 aaPredicted RBP5.77□□□□□ -1.49
SHH4YLR164W YOL013W-AP0C272 63 aaPredicted RBP5.76□□□□□ -1.49
SHH4YLR164W YER187WP40102 141 aa5.75□□□□□ -1.49
SHH4YLR164W LIP1Q03579 150 aa5.75□□□□□ -1.49
SHH4YLR164W YIL102CP40488 101 aa5.74□□□□□ -1.49
SHH4YLR164W YIL002W-AQ3E7Z5 69 aa5.74□□□□□ -1.49
SHH4YLR164W CMC4Q3E7A9 73 aa5.73□□□□□ -1.49
SHH4YLR164W YKL069WP36088 180 aa5.72□□□□□ -1.49
SHH4YLR164W YOR316C-AQ3E806 69 aa5.71□□□□□ -1.5
SHH4YLR164W YOL166W-AQ8TGJ1 51 aa5.7□□□□□ -1.5
SHH4YLR164W YJR128WP47162 119 aa5.69□□□□□ -1.5
SHH4YLR164W AIM4P38305 123 aaPredicted RBP5.66□□□□□ -1.5
SHH4YLR164W YGR164WP53291 111 aa5.66□□□□□ -1.5
SHH4YLR164W HHF1P02309 103 aaKnown RBP5.62□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 760.5 ms