RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C YOS1Q3E834 85 aa0.24□□□□□ -2.37
SMD3YLR147C UBC4P15731 148 aa0.23□□□□□ -2.37
SMD3YLR147C YOL164W-AQ3E7A5 60 aa0.23□□□□□ -2.37
SMD3YLR147C MIC10Q96VH5 97 aa0.23□□□□□ -2.37
SMD3YLR147C YMR103CQ04436 120 aa0.22□□□□□ -2.37
SMD3YLR147C YPL038W-AQ3E7B4 63 aa0.22□□□□□ -2.37
SMD3YLR147C RRT15Q3E811 62 aa0.22□□□□□ -2.37
SMD3YLR147C UBC5P15732 148 aa0.21□□□□□ -2.38
SMD3YLR147C SRB6P32570 121 aa0.21□□□□□ -2.38
SMD3YLR147C YBR090CP38253 122 aa0.21□□□□□ -2.38
SMD3YLR147C YMR090WQ04304 227 aaKnown RBP0.21□□□□□ -2.38
SMD3YLR147C RPS11AP0CX47 156 aaKnown RBP0.2□□□□□ -2.38
SMD3YLR147C RPS11BP0CX48 156 aaKnown RBP0.2□□□□□ -2.38
SMD3YLR147C RGI1P40043 161 aaPredicted RBP0.2□□□□□ -2.38
SMD3YLR147C SPC1P46965 94 aa0.2□□□□□ -2.38
SMD3YLR147C NHP10Q03435 203 aa0.2□□□□□ -2.38
SMD3YLR147C YCR095W-AQ3E787 52 aa0.2□□□□□ -2.38
SMD3YLR147C RPA12P32529 125 aaKnown RBP0.19□□□□□ -2.38
SMD3YLR147C MRPL38P35996 138 aaPredicted RBP0.19□□□□□ -2.38
SMD3YLR147C AIM19P40502 157 aa0.19□□□□□ -2.38
SMD3YLR147C PAU5P43575 122 aa0.19□□□□□ -2.38
SMD3YLR147C MRX7P53869 86 aa0.19□□□□□ -2.38
SMD3YLR147C YOR289WQ12012 251 aaPredicted RBP0.19□□□□□ -2.38
SMD3YLR147C YOR011W-AQ3E807 68 aa0.19□□□□□ -2.38
SMD3YLR147C YLL066W-BQ8TGJ7 56 aa0.19□□□□□ -2.38
SMD3YLR147C MRP17P28778 131 aa0.18□□□□□ -2.38
SMD3YLR147C YBR292CP38357 123 aa0.18□□□□□ -2.38
SMD3YLR147C SNA2P56508 79 aa0.18□□□□□ -2.38
SMD3YLR147C ICY1Q04329 127 aa0.18□□□□□ -2.38
SMD3YLR147C YDR029WQ12111 104 aa0.18□□□□□ -2.38
SMD3YLR147C MHF2Q3E829 80 aa0.18□□□□□ -2.38
SMD3YLR147C YCR075W-AQ3E830 75 aa0.18□□□□□ -2.38
SMD3YLR147C PAU6P0CE90 120 aa0.17□□□□□ -2.38
SMD3YLR147C PAU18P0CE91 120 aa0.17□□□□□ -2.38
SMD3YLR147C TIM12P32830 109 aa0.17□□□□□ -2.38
SMD3YLR147C YHL005CP38752 130 aa0.17□□□□□ -2.38
SMD3YLR147C YNL190WP53872 204 aa0.17□□□□□ -2.38
SMD3YLR147C YNR034W-AQ3E841 98 aa0.17□□□□□ -2.38
SMD3YLR147C KSH1Q8TGJ3 72 aa0.17□□□□□ -2.38
SMD3YLR147C RSM19P53733 91 aaPredicted RBP0.16□□□□□ -2.38
SMD3YLR147C YBL071CP38185 102 aa0.15□□□□□ -2.39
SMD3YLR147C SNU13P39990 126 aaKnown RBP0.15□□□□□ -2.39
SMD3YLR147C RSM18P40033 138 aa0.15□□□□□ -2.39
SMD3YLR147C EMC5P40540 141 aa0.15□□□□□ -2.39
SMD3YLR147C PAU20Q08322 120 aa0.15□□□□□ -2.39
SMD3YLR147C YGR025WP53216 100 aa0.14□□□□□ -2.39
SMD3YLR147C PAU1P0CE88 120 aa0.13□□□□□ -2.39
SMD3YLR147C PAU14P0CE89 120 aa0.13□□□□□ -2.39
SMD3YLR147C PAU8P0CE92 120 aa0.13□□□□□ -2.39
SMD3YLR147C PAU11P0CE93 120 aa0.13□□□□□ -2.39
SMD3YLR147C HMRA1P0CY11 126 aa0.13□□□□□ -2.39
SMD3YLR147C PAU13P38725 120 aa0.13□□□□□ -2.39
SMD3YLR147C YNL198CP40166 100 aa0.13□□□□□ -2.39
SMD3YLR147C RPC10P40422 70 aa0.13□□□□□ -2.39
SMD3YLR147C PAU10Q03050 120 aa0.13□□□□□ -2.39
SMD3YLR147C FYV7Q12247 151 aa0.13□□□□□ -2.39
SMD3YLR147C PAU9Q3E770 120 aa0.13□□□□□ -2.39
SMD3YLR147C YBR016WP38216 128 aa0.12□□□□□ -2.39
SMD3YLR147C YOR192C-CQ3E736 78 aa0.12□□□□□ -2.39
SMD3YLR147C Q0017Q9ZZX8 53 aa0.12□□□□□ -2.39
SMD3YLR147C PAU4P53427 120 aa0.11□□□□□ -2.39
SMD3YLR147C YPR010C-AA5Z2X5 72 aa0.1□□□□□ -2.39
SMD3YLR147C ECM12O13529 151 aa0.1□□□□□ -2.39
SMD3YLR147C ATX1P38636 73 aa0.1□□□□□ -2.39
SMD3YLR147C RPL38P49167 78 aaKnown RBP0.1□□□□□ -2.39
SMD3YLR147C YMR082CQ04276 118 aa0.1□□□□□ -2.39
SMD3YLR147C YOL131WQ08270 108 aa0.1□□□□□ -2.39
SMD3YLR147C YFR009W-AP0C5M9 85 aa0.09□□□□□ -2.4
SMD3YLR147C COX7P10174 60 aa0.09□□□□□ -2.4
SMD3YLR147C PDX3P38075 228 aaKnown RBP0.09□□□□□ -2.4
SMD3YLR147C MSL1P40567 111 aaPredicted RBP0.09□□□□□ -2.4
SMD3YLR147C YNL042W-BQ3E7Z2 85 aa0.09□□□□□ -2.4
SMD3YLR147C YJR107C-AP0CT86 78 aa0.08□□□□□ -2.4
SMD3YLR147C BSC4P53841 131 aa0.08□□□□□ -2.4
SMD3YLR147C YDR042CQ03205 200 aa0.08□□□□□ -2.4
SMD3YLR147C Q0032Q9ZZX7 96 aa0.08□□□□□ -2.4
SMD3YLR147C CWP2P43497 92 aa0.07□□□□□ -2.4
SMD3YLR147C ERI1P62651 68 aaKnown RBP0.07□□□□□ -2.4
SMD3YLR147C ZEO1Q08245 113 aa0.07□□□□□ -2.4
SMD3YLR147C YBR201C-AQ2V2Q3 67 aa0.06□□□□□ -2.4
SMD3YLR147C YKL018C-AQ3E7A7 99 aa0.06□□□□□ -2.4
SMD3YLR147C SUS1Q6WNK7 96 aa0.06□□□□□ -2.4
SMD3YLR147C YPL225WQ08971 146 aaKnown RBP0.05□□□□□ -2.4
SMD3YLR147C YMR122W-AQ3E842 84 aa0.05□□□□□ -2.4
SMD3YLR147C NHP2P32495 156 aaPredicted RBP0.04□□□□□ -2.4
SMD3YLR147C TOM6P33448 61 aa0.04□□□□□ -2.4
SMD3YLR147C PMP3P87284 55 aa0.04□□□□□ -2.4
SMD3YLR147C YIL134C-AQ45U18 67 aa0.04□□□□□ -2.4
SMD3YLR147C YAL065CO13511 128 aa0.03□□□□□ -2.4
SMD3YLR147C YPR145C-AQ2V2P0 78 aa0.03□□□□□ -2.4
SMD3YLR147C SPI1P40092 148 aa0.02□□□□□ -2.41
SMD3YLR147C ATP18P81450 59 aa0.02□□□□□ -2.41
SMD3YLR147C SCP1Q08873 200 aa0.02□□□□□ -2.41
SMD3YLR147C YGL258W-AQ3E740 77 aa0.02□□□□□ -2.41
SMD3YLR147C YBR200W-AQ3E755 54 aa0.01□□□□□ -2.41
SMD3YLR147C SDH6Q3E785 79 aa0.01□□□□□ -2.41
SMD3YLR147C YPR108W-AQ3E7B3 70 aa0.01□□□□□ -2.41
SMD3YLR147C YGR121W-AQ3E816 71 aa0.01□□□□□ -2.41
SMD3YLR147C YHR073W-AP0C5N7 58 aa0□□□□□ -2.41
SMD3YLR147C FPR2P32472 135 aa0□□□□□ -2.41
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms