RNA–Protein interactions for RNA: YKL185W

ASH1, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene ASH1, Length 1,767 nt, Biotype protein coding, Subcellular localisation Cell cortex, Cellular bud, Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASH1YKL185W YKL183C-AQ3E765 70 aa3.99□□□□□ -1.77
ASH1YKL185W YFL019CP43576 117 aa3.99□□□□□ -1.77
ASH1YKL185W SMD1Q02260 146 aaPredicted RBP3.99□□□□□ -1.77
ASH1YKL185W NOP10Q6Q547 58 aaPredicted RBP3.99□□□□□ -1.77
ASH1YKL185W MVB12P42939 101 aa3.98□□□□□ -1.77
ASH1YKL185W YOR314WQ12506 109 aa3.98□□□□□ -1.77
ASH1YKL185W TDA8Q6B2U8 126 aa3.98□□□□□ -1.77
ASH1YKL185W RPL29P05747 59 aaPredicted RBP3.97□□□□□ -1.77
ASH1YKL185W YBR144CP34215 104 aa3.97□□□□□ -1.77
ASH1YKL185W YCR001WP25347 104 aa3.97□□□□□ -1.77
ASH1YKL185W UTP20P35194 2493 aaKnown RBP3.96□□□□□ -1.78
ASH1YKL185W YDR274CP87283 123 aa3.96□□□□□ -1.78
ASH1YKL185W ICS3P47034 131 aa3.95□□□□□ -1.78
ASH1YKL185W YLR412C-AQ3E742 68 aa3.95□□□□□ -1.78
ASH1YKL185W YBR126W-AQ8TGU7 68 aa3.95□□□□□ -1.78
ASH1YKL185W YMR320WQ04897 101 aa3.94□□□□□ -1.78
ASH1YKL185W YOL014WQ08110 124 aa3.94□□□□□ -1.78
ASH1YKL185W RPL26AP05743 127 aaKnown RBP3.94□□□□□ -1.78
ASH1YKL185W YAL064WP39711 94 aa3.94□□□□□ -1.78
ASH1YKL185W RPL26BP53221 127 aaKnown RBP3.94□□□□□ -1.78
ASH1YKL185W YGR164WP53291 111 aa3.94□□□□□ -1.78
ASH1YKL185W YDL241WQ07738 123 aa3.94□□□□□ -1.78
ASH1YKL185W YOR268CQ08734 132 aa3.94□□□□□ -1.78
ASH1YKL185W YGR240C-AQ3E786 66 aa3.94□□□□□ -1.78
ASH1YKL185W YNL162W-AQ3E7A8 72 aa3.94□□□□□ -1.78
ASH1YKL185W AQY2P0CD90 149 aa3.93□□□□□ -1.78
ASH1YKL185W YGR035W-AQ45U48 73 aa3.93□□□□□ -1.78
ASH1YKL185W RPL36BO14455 100 aaKnown RBP3.92□□□□□ -1.78
ASH1YKL185W RPL36AP05745 100 aaPredicted RBP3.92□□□□□ -1.78
ASH1YKL185W YBL039W-BP0C268 59 aa3.92□□□□□ -1.78
ASH1YKL185W YBL081WP38180 368 aaKnown RBP3.92□□□□□ -1.78
ASH1YKL185W RRT15Q3E811 62 aa3.92□□□□□ -1.78
ASH1YKL185W FYV5P25585 152 aa3.91□□□□□ -1.78
ASH1YKL185W RPC10P40422 70 aa3.91□□□□□ -1.78
ASH1YKL185W YBR230W-AQ3E762 66 aa3.91□□□□□ -1.78
ASH1YKL185W YDR182W-AQ3E796 67 aa3.91□□□□□ -1.78
ASH1YKL185W YOL166W-AQ8TGJ1 51 aa3.91□□□□□ -1.78
ASH1YKL185W YHL005CP38752 130 aa3.91□□□□□ -1.78
ASH1YKL185W COX23P38824 151 aa3.91□□□□□ -1.78
ASH1YKL185W YIL102CP40488 101 aa3.91□□□□□ -1.78
ASH1YKL185W YHR213W-BQ8TGK1 99 aa3.91□□□□□ -1.78
ASH1YKL185W YCL042WP25572 119 aa3.9□□□□□ -1.79
ASH1YKL185W YLR162WQ06235 118 aa3.9□□□□□ -1.79
ASH1YKL185W YOR381W-AQ3E804 55 aa3.9□□□□□ -1.79
ASH1YKL185W YGR121W-AQ3E816 71 aa3.9□□□□□ -1.79
ASH1YKL185W YJL127C-BQ3E828 52 aa3.9□□□□□ -1.79
ASH1YKL185W EDC2P40023 145 aaPredicted RBP3.89□□□□□ -1.79
ASH1YKL185W IGD1P43598 195 aa3.89□□□□□ -1.79
ASH1YKL185W SFT1P43682 97 aa3.89□□□□□ -1.79
ASH1YKL185W RPS30AP0CX33 63 aaKnown RBP3.89□□□□□ -1.79
ASH1YKL185W RPS30BP0CX34 63 aaKnown RBP3.89□□□□□ -1.79
ASH1YKL185W RDS3Q06835 107 aaPredicted RBP3.89□□□□□ -1.79
ASH1YKL185W YJL133C-AQ3E7A3 74 aa3.89□□□□□ -1.79
ASH1YKL185W YPR010C-AA5Z2X5 72 aa3.87□□□□□ -1.79
ASH1YKL185W DYN1P36022 4092 aa3.87□□□□□ -1.79
ASH1YKL185W SGF11Q03067 99 aa3.86□□□□□ -1.79
ASH1YKL185W LIP1Q03579 150 aa3.86□□□□□ -1.79
ASH1YKL185W YAR023CD6VPM8 179 aa3.86□□□□□ -1.79
ASH1YKL185W RPL33AP05744 107 aaKnown RBP3.86□□□□□ -1.79
ASH1YKL185W RPL33BP41056 107 aaKnown RBP3.86□□□□□ -1.79
ASH1YKL185W SPC1P46965 94 aa3.85□□□□□ -1.79
ASH1YKL185W YNL277W-AQ3E7Z0 62 aa3.85□□□□□ -1.79
ASH1YKL185W YLR307C-AQ3E825 87 aa3.85□□□□□ -1.79
ASH1YKL185W YNL042W-BQ3E7Z2 85 aa3.84□□□□□ -1.8
ASH1YKL185W MIC10Q96VH5 97 aa3.84□□□□□ -1.8
ASH1YKL185W Q0032Q9ZZX7 96 aa3.84□□□□□ -1.8
ASH1YKL185W SPT4P32914 102 aaPredicted RBP3.83□□□□□ -1.8
ASH1YKL185W YDR115WQ04598 105 aa3.83□□□□□ -1.8
ASH1YKL185W ECM19Q06011 112 aa3.83□□□□□ -1.8
ASH1YKL185W YMR122CQ03879 124 aa3.82□□□□□ -1.8
ASH1YKL185W YHR007C-AQ07074 71 aa3.81□□□□□ -1.8
ASH1YKL185W YEL045CP32616 141 aa3.8□□□□□ -1.8
ASH1YKL185W YKL065W-AQ2V2P2 73 aa3.8□□□□□ -1.8
ASH1YKL185W HHF1P02309 103 aaKnown RBP3.79□□□□□ -1.8
ASH1YKL185W PEX22P39718 180 aa3.79□□□□□ -1.8
ASH1YKL185W BSC4P53841 131 aa3.79□□□□□ -1.8
ASH1YKL185W SNA2P56508 79 aa3.79□□□□□ -1.8
ASH1YKL185W OST5Q92316 86 aa3.79□□□□□ -1.8
ASH1YKL185W YOL013W-AP0C272 63 aaPredicted RBP3.79□□□□□ -1.8
ASH1YKL185W HOT13P36078 116 aa3.79□□□□□ -1.8
ASH1YKL185W YLL066W-BQ8TGJ7 56 aa3.79□□□□□ -1.8
ASH1YKL185W YER188C-AP0C0V2 99 aa3.78□□□□□ -1.8
ASH1YKL185W YDR010CQ12426 110 aa3.78□□□□□ -1.8
ASH1YKL185W YPR153WQ06537 140 aa3.77□□□□□ -1.81
ASH1YKL185W DDR2P89113 61 aa3.76□□□□□ -1.81
ASH1YKL185W YOR072WQ08486 104 aa3.76□□□□□ -1.81
ASH1YKL185W RTC6O14464 93 aa3.76□□□□□ -1.81
ASH1YKL185W YAR064WP39563 99 aa3.75□□□□□ -1.81
ASH1YKL185W AUA1P32450 94 aa3.74□□□□□ -1.81
ASH1YKL185W YLR157W-DP0CE99 70 aa3.74□□□□□ -1.81
ASH1YKL185W GIS2P53849 153 aaKnown RBP RIP-Chip data3.74□□□□□ -1.81not detected
ASH1YKL185W SDH6Q3E785 79 aa3.73□□□□□ -1.81
ASH1YKL185W YGL041C-BQ3E750 60 aa3.72□□□□□ -1.81
ASH1YKL185W YOR376W-AQ3E805 51 aa3.72□□□□□ -1.81
ASH1YKL185W YHR125WP38831 101 aa3.71□□□□□ -1.81
ASH1YKL185W YGL193CP53097 103 aa3.71□□□□□ -1.81
ASH1YKL185W YMR230W-AQ3E7B5 62 aa3.71□□□□□ -1.81
ASH1YKL185W HUB1Q6Q546 73 aa3.71□□□□□ -1.81
ASH1YKL185W YCR095W-AQ3E787 52 aa3.71□□□□□ -1.82
ASH1YKL185W YMR001C-AQ8TGS9 76 aa3.71□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 94.2 ms