RNA–Protein interactions for RNA: YJR060W

CBF1, Transcript of Basic helix-loop-helix (bHLH) protein, yeastyeast

Gene CBF1, Length 1,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF1YJR060W DDR48P18899 430 aaKnown RBP3.36□□□□□ -1.87
CBF1YJR060W NHP2P32495 156 aaPredicted RBP3.36□□□□□ -1.87
CBF1YJR060W MSA2P36157 363 aa3.36□□□□□ -1.87
CBF1YJR060W SPG1P50088 95 aa3.36□□□□□ -1.87
CBF1YJR060W YLR296WQ05898 108 aa3.36□□□□□ -1.87
CBF1YJR060W LSM6Q06406 86 aaKnown RBP3.36□□□□□ -1.87
CBF1YJR060W LSO2Q3E772 92 aaKnown RBP3.36□□□□□ -1.87
CBF1YJR060W YLR236CA0A023PZG4 107 aa3.35□□□□□ -1.87
CBF1YJR060W HYP2P23301 157 aaKnown RBP3.35□□□□□ -1.87
CBF1YJR060W FYV5P25585 152 aa3.35□□□□□ -1.87
CBF1YJR060W YLR156WP0CE96 114 aa3.34□□□□□ -1.87
CBF1YJR060W YLR159WP0CE97 114 aa3.34□□□□□ -1.87
CBF1YJR060W YLR161WP0CE98 114 aa3.34□□□□□ -1.87
CBF1YJR060W MRPL24P36525 258 aaPredicted RBP3.34□□□□□ -1.87
CBF1YJR060W SFT1P43682 97 aa3.34□□□□□ -1.87
CBF1YJR060W HUR1P45820 110 aa3.34□□□□□ -1.87
CBF1YJR060W YGR121W-AQ3E816 71 aa3.34□□□□□ -1.87
CBF1YJR060W YHR139C-AO13536 103 aa3.33□□□□□ -1.88
CBF1YJR060W YGL149WP53116 101 aa3.33□□□□□ -1.88
CBF1YJR060W YOR268CQ08734 132 aa3.33□□□□□ -1.88
CBF1YJR060W YIL102C-AQ2V2P5 75 aa3.32□□□□□ -1.88
CBF1YJR060W YOR034C-AQ3E735 80 aa3.32□□□□□ -1.88
CBF1YJR060W YOR072WQ08486 104 aa3.31□□□□□ -1.88
CBF1YJR060W YDR010CQ12426 110 aa3.31□□□□□ -1.88
CBF1YJR060W OST2P46964 130 aa3.3□□□□□ -1.88
CBF1YJR060W BSC4P53841 131 aa3.3□□□□□ -1.88
CBF1YJR060W BET1P22804 142 aa3.29□□□□□ -1.88
CBF1YJR060W MPC3P53311 146 aa3.29□□□□□ -1.88
CBF1YJR060W YPR170W-BP0C5R9 85 aa3.28□□□□□ -1.88
CBF1YJR060W TSC3Q3E790 80 aa3.28□□□□□ -1.88
CBF1YJR060W RPL36BO14455 100 aaKnown RBP3.27□□□□□ -1.89
CBF1YJR060W YHR007C-AQ07074 71 aa3.27□□□□□ -1.89
CBF1YJR060W TDA8Q6B2U8 126 aa3.27□□□□□ -1.89
CBF1YJR060W KRE1P17260 313 aa3.26□□□□□ -1.89
CBF1YJR060W YHR125WP38831 101 aa3.26□□□□□ -1.89
CBF1YJR060W YNL198CP40166 100 aa3.25□□□□□ -1.89
CBF1YJR060W YJR107C-AP0CT86 78 aa3.24□□□□□ -1.89
CBF1YJR060W KSH1Q8TGJ3 72 aa3.24□□□□□ -1.89
CBF1YJR060W YJL197C-AP0C5P0 93 aa3.23□□□□□ -1.89
CBF1YJR060W YNL184CP53876 108 aa3.23□□□□□ -1.89
CBF1YJR060W ATP18P81450 59 aa3.23□□□□□ -1.89
CBF1YJR060W KTI11Q3E840 82 aa3.23□□□□□ -1.89
CBF1YJR060W YHR032W-AP0C5N6 59 aa3.21□□□□□ -1.9
CBF1YJR060W YBR027CP38220 110 aa3.21□□□□□ -1.9
CBF1YJR060W DSE2P38844 325 aa3.2□□□□□ -1.9
CBF1YJR060W YLR157W-DP0CE99 70 aa3.19□□□□□ -1.9
CBF1YJR060W RSM19P53733 91 aaPredicted RBP3.19□□□□□ -1.9
CBF1YJR060W YFR032C-BQ8TGU2 87 aa3.19□□□□□ -1.9
CBF1YJR060W YFR009W-AP0C5M9 85 aa3.18□□□□□ -1.9
CBF1YJR060W YDL012CQ12489 107 aa3.18□□□□□ -1.9
CBF1YJR060W RSM18P40033 138 aa3.17□□□□□ -1.9
CBF1YJR060W CMC4Q3E7A9 73 aa3.17□□□□□ -1.9
CBF1YJR060W YHR213W-BQ8TGK1 99 aa3.17□□□□□ -1.9
CBF1YJR060W YHL018WP38744 120 aaPredicted RBP3.16□□□□□ -1.9
CBF1YJR060W YJL133C-AQ3E7A3 74 aa3.16□□□□□ -1.9
CBF1YJR060W YOL097W-AQ3E7Y9 61 aa3.16□□□□□ -1.9
CBF1YJR060W YHL005CP38752 130 aa3.15□□□□□ -1.91
CBF1YJR060W COX23P38824 151 aa3.15□□□□□ -1.91
CBF1YJR060W RPA12P32529 125 aaKnown RBP3.14□□□□□ -1.91
CBF1YJR060W ICS3P47034 131 aa3.14□□□□□ -1.91
CBF1YJR060W YLR162WQ06235 118 aa3.14□□□□□ -1.91
CBF1YJR060W YCR085WP25650 117 aa3.13□□□□□ -1.91
CBF1YJR060W SHH4Q06236 168 aa3.13□□□□□ -1.91
CBF1YJR060W PBI2P0CT04 75 aaKnown RBP3.12□□□□□ -1.91
CBF1YJR060W TDA2P40045 126 aa3.12□□□□□ -1.91
CBF1YJR060W MIC10Q96VH5 97 aa3.12□□□□□ -1.91
CBF1YJR060W COX7P10174 60 aa3.11□□□□□ -1.91
CBF1YJR060W YDR381C-AQ3E6R5 114 aa3.11□□□□□ -1.91
CBF1YJR060W YJL144WP47009 104 aa3.09□□□□□ -1.91
CBF1YJR060W RAD6P06104 172 aa3.08□□□□□ -1.92
CBF1YJR060W SKI6P46948 246 aaPredicted RBP3.08□□□□□ -1.92
CBF1YJR060W RPL38P49167 78 aaKnown RBP3.08□□□□□ -1.92
CBF1YJR060W COF1Q03048 143 aaKnown RBP3.08□□□□□ -1.92
CBF1YJR060W YOR304C-AO14468 76 aa3.07□□□□□ -1.92
CBF1YJR060W YHL042WP38729 150 aa3.07□□□□□ -1.92
CBF1YJR060W YNL122CP53921 115 aaPredicted RBP3.07□□□□□ -1.92
CBF1YJR060W RPS28BP0C0X0 67 aaKnown RBP3.06□□□□□ -1.92
CBF1YJR060W ATX1P38636 73 aa3.06□□□□□ -1.92
CBF1YJR060W EDC1P53080 175 aaPredicted RBP3.06□□□□□ -1.92
CBF1YJR060W YOL014WQ08110 124 aa3.06□□□□□ -1.92
CBF1YJR060W RPS28AQ3E7X9 67 aaPredicted RBP3.06□□□□□ -1.92
CBF1YJR060W YCR050CP25630 102 aa3.05□□□□□ -1.92
CBF1YJR060W ATP20Q12233 115 aa3.04□□□□□ -1.92
CBF1YJR060W EMC6Q12431 108 aa3.04□□□□□ -1.92
CBF1YJR060W YML100W-AQ8TGT0 57 aa3.04□□□□□ -1.92
CBF1YJR060W YHR073W-AP0C5N7 58 aa3.03□□□□□ -1.92
CBF1YJR060W YER187WP40102 141 aa3.02□□□□□ -1.93
CBF1YJR060W RPL36AP05745 100 aaPredicted RBP3.01□□□□□ -1.93
CBF1YJR060W INO4P13902 151 aa3.01□□□□□ -1.93
CBF1YJR060W YAR064WP39563 99 aa3.01□□□□□ -1.93
CBF1YJR060W RPL37BP51402 88 aaKnown RBP3.01□□□□□ -1.93
CBF1YJR060W YSY6P38374 65 aa3□□□□□ -1.93
CBF1YJR060W YLR285C-AQ3E771 56 aa2.97□□□□□ -1.93
CBF1YJR060W SLO1Q3E784 85 aa2.97□□□□□ -1.93
CBF1YJR060W YLR412C-AQ3E742 68 aa2.96□□□□□ -1.94
CBF1YJR060W YFL041W-AQ3E817 63 aa2.96□□□□□ -1.94
CBF1YJR060W YPR153WQ06537 140 aa2.95□□□□□ -1.94
CBF1YJR060W YLR361C-AQ3E795 98 aa2.95□□□□□ -1.94
CBF1YJR060W YGR164WP53291 111 aa2.94□□□□□ -1.94
CBF1YJR060W YOR316C-AQ3E806 69 aa2.93□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 29.1 ms