RNA–Protein interactions for RNA: YJL178C

ATG27, Transcript of Type I membrane protein involved in autophagy and the Cvt pathway, yeastyeast

Gene ATG27, Length 816 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG27YJL178C YAR023CD6VPM8 179 aa1.92□□□□□ -2.1
ATG27YJL178C YBL039W-BP0C268 59 aa1.92□□□□□ -2.1
ATG27YJL178C YFL019CP43576 117 aa1.92□□□□□ -2.1
ATG27YJL178C YOR268CQ08734 132 aa1.92□□□□□ -2.1
ATG27YJL178C YLR307C-AQ3E825 87 aa1.92□□□□□ -2.1
ATG27YJL178C YJR107C-AP0CT86 78 aa1.91□□□□□ -2.1
ATG27YJL178C UBC4P15731 148 aa1.91□□□□□ -2.1
ATG27YJL178C SKI6P46948 246 aaPredicted RBP1.91□□□□□ -2.1
ATG27YJL178C YNL184CP53876 108 aa1.91□□□□□ -2.1
ATG27YJL178C SNA2P56508 79 aa1.91□□□□□ -2.1
ATG27YJL178C YBR230W-AQ3E762 66 aa1.91□□□□□ -2.1
ATG27YJL178C YHR139C-AO13536 103 aa1.9□□□□□ -2.11
ATG27YJL178C RAD6P06104 172 aa1.9□□□□□ -2.11
ATG27YJL178C YFR009W-AP0C5M9 85 aa1.9□□□□□ -2.11
ATG27YJL178C YLR156WP0CE96 114 aa1.9□□□□□ -2.11
ATG27YJL178C YLR159WP0CE97 114 aa1.9□□□□□ -2.11
ATG27YJL178C YLR161WP0CE98 114 aa1.9□□□□□ -2.11
ATG27YJL178C GAT4P40569 121 aa1.9□□□□□ -2.11
ATG27YJL178C ATP18P81450 59 aa1.9□□□□□ -2.11
ATG27YJL178C YCR085WP25650 117 aa1.89□□□□□ -2.11
ATG27YJL178C YFL041W-AQ3E817 63 aa1.89□□□□□ -2.11
ATG27YJL178C YJL127C-BQ3E828 52 aa1.89□□□□□ -2.11
ATG27YJL178C Q0032Q9ZZX7 96 aa1.89□□□□□ -2.11
ATG27YJL178C FYV5P25585 152 aa1.88□□□□□ -2.11
ATG27YJL178C YDR029WQ12111 104 aa1.88□□□□□ -2.11
ATG27YJL178C YDR119W-AQ2V2P9 66 aa1.88□□□□□ -2.11
ATG27YJL178C RPL26AP05743 127 aaKnown RBP1.87□□□□□ -2.11
ATG27YJL178C YGL193CP53097 103 aa1.87□□□□□ -2.11
ATG27YJL178C RPL26BP53221 127 aaKnown RBP1.87□□□□□ -2.11
ATG27YJL178C YHR007C-AQ07074 71 aa1.87□□□□□ -2.11
ATG27YJL178C YOL014WQ08110 124 aa1.87□□□□□ -2.11
ATG27YJL178C YNL042W-BQ3E7Z2 85 aa1.87□□□□□ -2.11
ATG27YJL178C ECM12O13529 151 aa1.86□□□□□ -2.11
ATG27YJL178C YDR034C-AP0C289 58 aa1.86□□□□□ -2.11
ATG27YJL178C BET1P22804 142 aa1.86□□□□□ -2.11
ATG27YJL178C ICS3P47034 131 aa1.86□□□□□ -2.11
ATG27YJL178C RPL38P49167 78 aaKnown RBP1.86□□□□□ -2.11
ATG27YJL178C BSC4P53841 131 aa1.86□□□□□ -2.11
ATG27YJL178C LCL2Q08045 131 aa1.86□□□□□ -2.11
ATG27YJL178C YLR285C-AQ3E771 56 aa1.86□□□□□ -2.11
ATG27YJL178C YHL018WP38744 120 aaPredicted RBP1.85□□□□□ -2.11
ATG27YJL178C YGR039WP53225 103 aa1.85□□□□□ -2.11
ATG27YJL178C DDR2P89113 61 aa1.85□□□□□ -2.11
ATG27YJL178C YHR213W-BQ8TGK1 99 aa1.85□□□□□ -2.11
ATG27YJL178C RSM18P40033 138 aa1.84□□□□□ -2.11
ATG27YJL178C YGL034CP53186 121 aa1.84□□□□□ -2.11
ATG27YJL178C SHH4Q06236 168 aa1.84□□□□□ -2.11
ATG27YJL178C EMC6Q12431 108 aa1.84□□□□□ -2.11
ATG27YJL178C YGL041C-BQ3E750 60 aa1.84□□□□□ -2.11
ATG27YJL178C TSC3Q3E790 80 aa1.84□□□□□ -2.11
ATG27YJL178C RPL36BO14455 100 aaKnown RBP1.83□□□□□ -2.12
ATG27YJL178C YHL042WP38729 150 aa1.83□□□□□ -2.12
ATG27YJL178C COX23P38824 151 aa1.83□□□□□ -2.12
ATG27YJL178C YAR1P46683 200 aa1.83□□□□□ -2.12
ATG27YJL178C RSM19P53733 91 aaPredicted RBP1.83□□□□□ -2.12
ATG27YJL178C COF1Q03048 143 aaKnown RBP1.83□□□□□ -2.12
ATG27YJL178C YOR072WQ08486 104 aa1.83□□□□□ -2.12
ATG27YJL178C YDR246W-AQ3E763 66 aa1.83□□□□□ -2.12
ATG27YJL178C YJL133C-AQ3E7A3 74 aa1.83□□□□□ -2.12
ATG27YJL178C YJL197C-AP0C5P0 93 aa1.82□□□□□ -2.12
ATG27YJL178C YSY6P38374 65 aa1.82□□□□□ -2.12
ATG27YJL178C TDA2P40045 126 aa1.82□□□□□ -2.12
ATG27YJL178C YPL038W-AQ3E7B4 63 aa1.82□□□□□ -2.12
ATG27YJL178C TDA8Q6B2U8 126 aa1.82□□□□□ -2.12
ATG27YJL178C MIC10Q96VH5 97 aa1.82□□□□□ -2.12
ATG27YJL178C YBR027CP38220 110 aa1.81□□□□□ -2.12
ATG27YJL178C SFT1P43682 97 aa1.81□□□□□ -2.12
ATG27YJL178C ATP20Q12233 115 aa1.81□□□□□ -2.12
ATG27YJL178C YLR162WQ06235 118 aa1.8□□□□□ -2.12
ATG27YJL178C YBL008W-AQ3E821 79 aa1.8□□□□□ -2.12
ATG27YJL178C NOP10Q6Q547 58 aaPredicted RBP1.8□□□□□ -2.12
ATG27YJL178C YER039C-AP0CD97 72 aa1.79□□□□□ -2.12
ATG27YJL178C DDR48P18899 430 aaKnown RBP1.79□□□□□ -2.12
ATG27YJL178C YGR121W-AQ3E816 71 aa1.79□□□□□ -2.12
ATG27YJL178C YOR304C-AO14468 76 aa1.78□□□□□ -2.12
ATG27YJL178C YER187WP40102 141 aa1.78□□□□□ -2.12
ATG27YJL178C MMS2P53152 137 aa1.78□□□□□ -2.12
ATG27YJL178C YHR086W-AQ3E746 53 aa1.78□□□□□ -2.12
ATG27YJL178C MDN1Q12019 4910 aaKnown RBP1.78□□□□□ -2.12
ATG27YJL178C LCL1Q02786 101 aa1.77□□□□□ -2.13
ATG27YJL178C YCR050CP25630 102 aa1.76□□□□□ -2.13
ATG27YJL178C TOM6P33448 61 aa1.76□□□□□ -2.13
ATG27YJL178C AIM4P38305 123 aaPredicted RBP1.76□□□□□ -2.13
ATG27YJL178C SPG1P50088 95 aa1.76□□□□□ -2.13
ATG27YJL178C YKL183C-AQ3E765 70 aa1.76□□□□□ -2.13
ATG27YJL178C YOL166W-AQ8TGJ1 51 aa1.76□□□□□ -2.13
ATG27YJL178C YAR064WP39563 99 aa1.75□□□□□ -2.13
ATG27YJL178C YIL102CP40488 101 aa1.75□□□□□ -2.13
ATG27YJL178C LIP1Q03579 150 aa1.75□□□□□ -2.13
ATG27YJL178C YOR314WQ12506 109 aa1.75□□□□□ -2.13
ATG27YJL178C YOL013W-AP0C272 63 aaPredicted RBP1.74□□□□□ -2.13
ATG27YJL178C YHR032W-AP0C5N6 59 aa1.74□□□□□ -2.13
ATG27YJL178C YGL149WP53116 101 aa1.74□□□□□ -2.13
ATG27YJL178C RPL36AP05745 100 aaPredicted RBP1.73□□□□□ -2.13
ATG27YJL178C YOL097W-AQ3E7Y9 61 aa1.73□□□□□ -2.13
ATG27YJL178C YLR157W-DP0CE99 70 aa1.72□□□□□ -2.13
ATG27YJL178C YPR153WQ06537 140 aa1.72□□□□□ -2.13
ATG27YJL178C YBR121C-AP0C5L4 52 aa1.71□□□□□ -2.14
ATG27YJL178C RPS30AP0CX33 63 aaKnown RBP1.71□□□□□ -2.14
ATG27YJL178C RPS30BP0CX34 63 aaKnown RBP1.71□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms