RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W BLM10P43583 2143 aa0.55□□□□□ -2.32
PEP8YJL053W YLR157W-EP0CF00 54 aa0.55□□□□□ -2.32
PEP8YJL053W MRPL11P36521 249 aaPredicted RBP0.55□□□□□ -2.32
PEP8YJL053W RPB11P38902 120 aa0.55□□□□□ -2.32
PEP8YJL053W RPC10P40422 70 aa0.55□□□□□ -2.32
PEP8YJL053W PHS1P40857 217 aa0.55□□□□□ -2.32
PEP8YJL053W YGR025WP53216 100 aa0.55□□□□□ -2.32
PEP8YJL053W APS2Q00381 147 aa0.55□□□□□ -2.32
PEP8YJL053W GPI19Q04082 140 aa0.55□□□□□ -2.32
PEP8YJL053W YLR296WQ05898 108 aa0.55□□□□□ -2.32
PEP8YJL053W YDR029WQ12111 104 aa0.55□□□□□ -2.32
PEP8YJL053W YLR118CQ12354 227 aa0.55□□□□□ -2.32
PEP8YJL053W YOR034C-AQ3E735 80 aa0.55□□□□□ -2.32
PEP8YJL053W YMR175W-AQ3E766 64 aa0.55□□□□□ -2.32
PEP8YJL053W ENV10Q99382 181 aa0.55□□□□□ -2.32
PEP8YJL053W ECM12O13529 151 aa0.54□□□□□ -2.32
PEP8YJL053W YJL197C-AP0C5P0 93 aa0.54□□□□□ -2.32
PEP8YJL053W YER039C-AP0CD97 72 aa0.54□□□□□ -2.32
PEP8YJL053W SRB6P32570 121 aa0.54□□□□□ -2.32
PEP8YJL053W YIL163CP40448 117 aa0.54□□□□□ -2.32
PEP8YJL053W AIM19P40502 157 aa0.54□□□□□ -2.32
PEP8YJL053W SNN1P48232 102 aa0.54□□□□□ -2.32
PEP8YJL053W TOS6P48560 102 aa0.54□□□□□ -2.32
PEP8YJL053W ERV14P53173 138 aa0.54□□□□□ -2.32
PEP8YJL053W YLR194CQ05777 254 aa0.54□□□□□ -2.32
PEP8YJL053W YGL194C-AQ2V2P6 80 aa0.54□□□□□ -2.32
PEP8YJL053W VMA9Q3E7B6 73 aa0.54□□□□□ -2.32
PEP8YJL053W YOR008C-AQ3E7B9 74 aa0.54□□□□□ -2.32
PEP8YJL053W YCL001W-BQ96VH2 84 aa0.54□□□□□ -2.32
PEP8YJL053W PAU19P0CE85 124 aa0.53□□□□□ -2.32
PEP8YJL053W PAU21P0CE86 164 aa0.53□□□□□ -2.32
PEP8YJL053W PAU22P0CE87 164 aa0.53□□□□□ -2.32
PEP8YJL053W HMRA2P0CY13 119 aa0.53□□□□□ -2.32
PEP8YJL053W PAU3P25610 124 aa0.53□□□□□ -2.32
PEP8YJL053W PAU15P40585 124 aa0.53□□□□□ -2.32
PEP8YJL053W SNA2P56508 79 aa0.53□□□□□ -2.32
PEP8YJL053W ZEO1Q08245 113 aa0.53□□□□□ -2.32
PEP8YJL053W RRT15Q3E811 62 aa0.53□□□□□ -2.32
PEP8YJL053W YNR034W-AQ3E841 98 aa0.53□□□□□ -2.32
PEP8YJL053W YAL065CO13511 128 aa0.52□□□□□ -2.33
PEP8YJL053W RPL29P05747 59 aaPredicted RBP0.52□□□□□ -2.33
PEP8YJL053W YBL039W-BP0C268 59 aa0.52□□□□□ -2.33
PEP8YJL053W GSP1P32835 219 aaKnown RBP0.52□□□□□ -2.33
PEP8YJL053W CWP2P43497 92 aa0.52□□□□□ -2.33
PEP8YJL053W YNL190WP53872 204 aa0.52□□□□□ -2.33
PEP8YJL053W YDR042CQ03205 200 aa0.52□□□□□ -2.33
PEP8YJL053W YDR010CQ12426 110 aa0.52□□□□□ -2.33
PEP8YJL053W WIP1Q2V2P8 89 aa0.52□□□□□ -2.33
PEP8YJL053W YNL277W-AQ3E7Z0 62 aa0.52□□□□□ -2.33
PEP8YJL053W Q0032Q9ZZX7 96 aa0.52□□□□□ -2.33
PEP8YJL053W UBC4P15731 148 aa0.51□□□□□ -2.33
PEP8YJL053W PAU16P35994 123 aa0.51□□□□□ -2.33
PEP8YJL053W YBR090CP38253 122 aa0.51□□□□□ -2.33
PEP8YJL053W SHU1P38751 150 aa0.51□□□□□ -2.33
PEP8YJL053W GTT1P40582 234 aa0.51□□□□□ -2.33
PEP8YJL053W VMA21P41806 77 aa0.51□□□□□ -2.33
PEP8YJL053W YIL014C-AQ02598 104 aa0.51□□□□□ -2.33
PEP8YJL053W CNL1Q06333 122 aa0.51□□□□□ -2.33
PEP8YJL053W YKL023C-AQ2V2P3 75 aa0.51□□□□□ -2.33
PEP8YJL053W YNL042W-BQ3E7Z2 85 aa0.51□□□□□ -2.33
PEP8YJL053W YGR121W-AQ3E816 71 aa0.51□□□□□ -2.33
PEP8YJL053W KSH1Q8TGJ3 72 aa0.51□□□□□ -2.33
PEP8YJL053W NHP2P32495 156 aaPredicted RBP0.5□□□□□ -2.33
PEP8YJL053W YKL044WP36092 106 aa0.5□□□□□ -2.33
PEP8YJL053W YHR130CP38834 111 aa0.5□□□□□ -2.33
PEP8YJL053W AIM11P87275 137 aa0.5□□□□□ -2.33
PEP8YJL053W DDR2P89113 61 aa0.5□□□□□ -2.33
PEP8YJL053W ARL3Q02804 198 aa0.5□□□□□ -2.33
PEP8YJL053W YMR103CQ04436 120 aa0.5□□□□□ -2.33
PEP8YJL053W PAU17Q12370 124 aa0.5□□□□□ -2.33
PEP8YJL053W COX7P10174 60 aa0.49□□□□□ -2.33
PEP8YJL053W YHL005CP38752 130 aa0.49□□□□□ -2.33
PEP8YJL053W ICY1Q04329 127 aa0.49□□□□□ -2.33
PEP8YJL053W HPA2Q06592 156 aa0.49□□□□□ -2.33
PEP8YJL053W PAU23Q07987 124 aa0.49□□□□□ -2.33
PEP8YJL053W YPL261CQ08976 102 aa0.49□□□□□ -2.33
PEP8YJL053W YBR230W-AQ3E762 66 aa0.49□□□□□ -2.33
PEP8YJL053W YLL006W-AQ3E814 58 aa0.49□□□□□ -2.33
PEP8YJL053W YJL127C-BQ3E828 52 aa0.49□□□□□ -2.33
PEP8YJL053W RPL36BO14455 100 aaKnown RBP0.48□□□□□ -2.33
PEP8YJL053W RPL36AP05745 100 aaPredicted RBP0.48□□□□□ -2.33
PEP8YJL053W YLR157W-DP0CE99 70 aa0.48□□□□□ -2.33
PEP8YJL053W POP7P38291 140 aa0.48□□□□□ -2.33
PEP8YJL053W MRPS12P53732 153 aa0.48□□□□□ -2.33
PEP8YJL053W SAE3P89114 91 aa0.48□□□□□ -2.33
PEP8YJL053W FYV7Q12247 151 aa0.48□□□□□ -2.33
PEP8YJL053W YOL097W-AQ3E7Y9 61 aa0.48□□□□□ -2.33
PEP8YJL053W YDL022C-AP0C5L6 82 aa0.47□□□□□ -2.33
PEP8YJL053W SSS1P35179 80 aa0.47□□□□□ -2.33
PEP8YJL053W MSL1P40567 111 aaPredicted RBP0.47□□□□□ -2.33
PEP8YJL053W BSC4P53841 131 aa0.47□□□□□ -2.33
PEP8YJL053W Q0017Q9ZZX8 53 aa0.47□□□□□ -2.33
PEP8YJL053W YOR304C-AO14468 76 aa0.46□□□□□ -2.34
PEP8YJL053W PAI3P01094 68 aa0.46□□□□□ -2.34
PEP8YJL053W HUR1P45820 110 aa0.46□□□□□ -2.34
PEP8YJL053W RSM19P53733 91 aaPredicted RBP0.46□□□□□ -2.34
PEP8YJL053W LSM6Q06406 86 aaKnown RBP0.46□□□□□ -2.34
PEP8YJL053W YHR073W-AP0C5N7 58 aa0.45□□□□□ -2.34
PEP8YJL053W YJR107C-AP0CT86 78 aa0.45□□□□□ -2.34
PEP8YJL053W COX23P38824 151 aa0.45□□□□□ -2.34
Retrieved 100 of 5,963 RNA–protein pairs in 34.6 ms