RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W HMRA1P0CY11 126 aa0.68□□□□□ -2.3
MSL1YIR009W MRPL38P35996 138 aaPredicted RBP0.68□□□□□ -2.3
MSL1YIR009W SHU1P38751 150 aa0.68□□□□□ -2.3
MSL1YIR009W GCV3P39726 170 aaPredicted RBP0.68□□□□□ -2.3
MSL1YIR009W EMC5P40540 141 aa0.67□□□□□ -2.3
MSL1YIR009W YCR075W-AQ3E830 75 aa0.67□□□□□ -2.3
MSL1YIR009W YFR010W-AP0C5N0 62 aa0.66□□□□□ -2.3
MSL1YIR009W MPC2P38857 129 aa0.66□□□□□ -2.3
MSL1YIR009W MSL1P40567 111 aaPredicted RBP0.66□□□□□ -2.3
MSL1YIR009W YDR042CQ03205 200 aa0.66□□□□□ -2.3
MSL1YIR009W YMR082CQ04276 118 aa0.66□□□□□ -2.3
MSL1YIR009W PAU6P0CE90 120 aa0.65□□□□□ -2.31
MSL1YIR009W PAU18P0CE91 120 aa0.65□□□□□ -2.31
MSL1YIR009W MRX7P53869 86 aa0.65□□□□□ -2.31
MSL1YIR009W SNA2P56508 79 aa0.65□□□□□ -2.31
MSL1YIR009W YBR072C-AQ3E794 53 aa0.65□□□□□ -2.31
MSL1YIR009W YCL001W-BQ96VH2 84 aa0.65□□□□□ -2.31
MSL1YIR009W RPS11AP0CX47 156 aaKnown RBP0.64□□□□□ -2.31
MSL1YIR009W RPS11BP0CX48 156 aaKnown RBP0.64□□□□□ -2.31
MSL1YIR009W MRP17P28778 131 aa0.64□□□□□ -2.31
MSL1YIR009W YBL071CP38185 102 aa0.64□□□□□ -2.31
MSL1YIR009W RSM18P40033 138 aa0.64□□□□□ -2.31
MSL1YIR009W ICY1Q04329 127 aa0.64□□□□□ -2.31
MSL1YIR009W YDR029WQ12111 104 aa0.64□□□□□ -2.31
MSL1YIR009W YDR010CQ12426 110 aa0.64□□□□□ -2.31
MSL1YIR009W YNR034W-AQ3E841 98 aa0.64□□□□□ -2.31
MSL1YIR009W YBR292CP38357 123 aa0.63□□□□□ -2.31
MSL1YIR009W AIM19P40502 157 aa0.63□□□□□ -2.31
MSL1YIR009W RPS29BP41058 56 aaKnown RBP0.62□□□□□ -2.31
MSL1YIR009W SPC1P46965 94 aa0.62□□□□□ -2.31
MSL1YIR009W NHP10Q03435 203 aa0.62□□□□□ -2.31
MSL1YIR009W RPS27AP35997 82 aaKnown RBP0.61□□□□□ -2.31
MSL1YIR009W RPS27BP38711 82 aa0.61□□□□□ -2.31
MSL1YIR009W YMR175W-AQ3E766 64 aa0.61□□□□□ -2.31
MSL1YIR009W SUS1Q6WNK7 96 aa0.61□□□□□ -2.31
MSL1YIR009W YHR173CP38864 112 aa0.6□□□□□ -2.31
MSL1YIR009W YHR214C-DP0CX93 97 aa0.59□□□□□ -2.31
MSL1YIR009W SNU13P39990 126 aaKnown RBP0.59□□□□□ -2.31
MSL1YIR009W PAU20Q08322 120 aa0.59□□□□□ -2.31
MSL1YIR009W ECM12O13529 151 aa0.58□□□□□ -2.32
MSL1YIR009W PAU1P0CE88 120 aa0.58□□□□□ -2.32
MSL1YIR009W PAU14P0CE89 120 aa0.58□□□□□ -2.32
MSL1YIR009W PAU8P0CE92 120 aa0.58□□□□□ -2.32
MSL1YIR009W PAU11P0CE93 120 aa0.58□□□□□ -2.32
MSL1YIR009W PAU13P38725 120 aa0.58□□□□□ -2.32
MSL1YIR009W PAU10Q03050 120 aa0.58□□□□□ -2.32
MSL1YIR009W YGL194C-AQ2V2P6 80 aa0.58□□□□□ -2.32
MSL1YIR009W PAU9Q3E770 120 aa0.58□□□□□ -2.32
MSL1YIR009W PAU4P53427 120 aa0.56□□□□□ -2.32
MSL1YIR009W YNL190WP53872 204 aa0.56□□□□□ -2.32
MSL1YIR009W SCP1Q08873 200 aa0.56□□□□□ -2.32
MSL1YIR009W NHP2P32495 156 aaPredicted RBP0.55□□□□□ -2.32
MSL1YIR009W SIP18P50263 79 aa0.55□□□□□ -2.32
MSL1YIR009W BSC4P53841 131 aa0.55□□□□□ -2.32
MSL1YIR009W YOL164W-AQ3E7A5 60 aa0.54□□□□□ -2.32
MSL1YIR009W YNL042W-BQ3E7Z2 85 aa0.54□□□□□ -2.32
MSL1YIR009W MHF2Q3E829 80 aa0.54□□□□□ -2.32
MSL1YIR009W COX7P10174 60 aa0.51□□□□□ -2.33
MSL1YIR009W RPA12P32529 125 aaKnown RBP0.51□□□□□ -2.33
MSL1YIR009W PDX3P38075 228 aaKnown RBP0.51□□□□□ -2.33
MSL1YIR009W RPC10P40422 70 aa0.51□□□□□ -2.33
MSL1YIR009W YOR343CQ12484 108 aa0.51□□□□□ -2.33
MSL1YIR009W YMR122W-AQ3E842 84 aa0.51□□□□□ -2.33
MSL1YIR009W POC4Q12245 148 aaPredicted RBP0.5□□□□□ -2.33
MSL1YIR009W YBR201C-AQ2V2Q3 67 aa0.5□□□□□ -2.33
MSL1YIR009W Q0032Q9ZZX7 96 aa0.5□□□□□ -2.33
MSL1YIR009W YAL065CO13511 128 aa0.49□□□□□ -2.33
MSL1YIR009W HOR7Q05827 59 aa0.49□□□□□ -2.33
MSL1YIR009W YCR085WP25650 117 aa0.48□□□□□ -2.33
MSL1YIR009W RPL38P49167 78 aaKnown RBP0.48□□□□□ -2.33
MSL1YIR009W YBR016WP38216 128 aa0.47□□□□□ -2.33
MSL1YIR009W YNL198CP40166 100 aa0.47□□□□□ -2.33
MSL1YIR009W TOM6P33448 61 aa0.46□□□□□ -2.34
MSL1YIR009W CWP2P43497 92 aa0.46□□□□□ -2.34
MSL1YIR009W PAU23Q07987 124 aa0.46□□□□□ -2.34
MSL1YIR009W PAU17Q12370 124 aa0.46□□□□□ -2.34
MSL1YIR009W NOP10Q6Q547 58 aaPredicted RBP0.46□□□□□ -2.34
MSL1YIR009W FPR2P32472 135 aa0.45□□□□□ -2.34
MSL1YIR009W SGF11Q03067 99 aa0.45□□□□□ -2.34
MSL1YIR009W YIL156W-BQ2V2P4 73 aa0.45□□□□□ -2.34
MSL1YIR009W YKL068W-AQ3E826 78 aa0.45□□□□□ -2.34
MSL1YIR009W ATP18P81450 59 aa0.44□□□□□ -2.34
MSL1YIR009W NCE101Q02820 53 aa0.43□□□□□ -2.34
MSL1YIR009W YOR314WQ12506 109 aa0.43□□□□□ -2.34
MSL1YIR009W YPR145C-AQ2V2P0 78 aa0.43□□□□□ -2.34
MSL1YIR009W YKL065W-AQ2V2P2 73 aa0.43□□□□□ -2.34
MSL1YIR009W YJR107C-AP0CT86 78 aa0.42□□□□□ -2.34
MSL1YIR009W YDR381C-AQ3E6R5 114 aa0.42□□□□□ -2.34
MSL1YIR009W YDR034C-AP0C289 58 aa0.4□□□□□ -2.35
MSL1YIR009W YFR009W-AP0C5M9 85 aa0.4□□□□□ -2.35
MSL1YIR009W YOR105WQ08504 108 aa0.4□□□□□ -2.35
MSL1YIR009W SDH6Q3E785 79 aa0.4□□□□□ -2.35
MSL1YIR009W YOL097W-AQ3E7Y9 61 aa0.4□□□□□ -2.35
MSL1YIR009W RPL39P04650 51 aa0.39□□□□□ -2.35
MSL1YIR009W YDL022C-AP0C5L6 82 aa0.39□□□□□ -2.35
MSL1YIR009W YDR119W-AQ2V2P9 66 aa0.39□□□□□ -2.35
MSL1YIR009W YGR121W-AQ3E816 71 aa0.39□□□□□ -2.35
MSL1YIR009W SWM2P40342 146 aa0.38□□□□□ -2.35
MSL1YIR009W EDC1P53080 175 aaPredicted RBP0.38□□□□□ -2.35
MSL1YIR009W YBR032WP38223 100 aa0.37□□□□□ -2.35
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms