RNA–Protein interactions for RNA: YIL008W

URM1, Transcript of Ubiquitin-like protein involved in thiolation of cytoplasmic tRNAs, yeast

Gene URM1, Length 300 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
URM1	YIL008W	SHG1	P38337	142 aa		0.28	□□□□□ -2.36
URM1	YIL008W	NSE4	P43124	402 aa		0.28	□□□□□ -2.36
URM1	YIL008W	TOS6	P48560	102 aa		0.28	□□□□□ -2.36
URM1	YIL008W	SBH1	P52870	82 aa		0.28	□□□□□ -2.36
URM1	YIL008W	YIL014C-A	Q02598	104 aa		0.28	□□□□□ -2.36
URM1	YIL008W	MGR2	Q02889	113 aa		0.28	□□□□□ -2.36
URM1	YIL008W	HPA2	Q06592	156 aa		0.28	□□□□□ -2.36
URM1	YIL008W	YOR072W	Q08486	104 aa		0.28	□□□□□ -2.36
URM1	YIL008W	YGL194C-A	Q2V2P6	80 aa		0.28	□□□□□ -2.36
URM1	YIL008W	COX19	Q3E731	98 aa		0.28	□□□□□ -2.36
URM1	YIL008W	YLR412C-A	Q3E742	68 aa		0.28	□□□□□ -2.36
URM1	YIL008W	YBR230W-A	Q3E762	66 aa		0.28	□□□□□ -2.36
URM1	YIL008W	YNR034W-A	Q3E841	98 aa		0.28	□□□□□ -2.36
URM1	YIL008W	YHR073W-A	P0C5N7	58 aa		0.27	□□□□□ -2.37
URM1	YIL008W	FUN14	P18411	198 aa		0.27	□□□□□ -2.37
URM1	YIL008W	GSP1	P32835	219 aa	Known RBP	0.27	□□□□□ -2.37
URM1	YIL008W	HSP10	P38910	106 aa		0.27	□□□□□ -2.37
URM1	YIL008W	PHS1	P40857	217 aa		0.27	□□□□□ -2.37
URM1	YIL008W	ERV14	P53173	138 aa		0.27	□□□□□ -2.37
URM1	YIL008W	JAC1	P53193	184 aa		0.27	□□□□□ -2.37
URM1	YIL008W	AIM11	P87275	137 aa		0.27	□□□□□ -2.37
URM1	YIL008W	APS2	Q00381	147 aa		0.27	□□□□□ -2.37
URM1	YIL008W	ICY1	Q04329	127 aa		0.27	□□□□□ -2.37
URM1	YIL008W	SHH4	Q06236	168 aa		0.27	□□□□□ -2.37
URM1	YIL008W	FYV7	Q12247	151 aa		0.27	□□□□□ -2.37
URM1	YIL008W	PAU17	Q12370	124 aa		0.27	□□□□□ -2.37
URM1	YIL008W	RPS22B	Q3E7Y3	130 aa	Known RBP	0.27	□□□□□ -2.37
URM1	YIL008W	YOL097W-A	Q3E7Y9	61 aa		0.27	□□□□□ -2.37
URM1	YIL008W	ATP5	P09457	212 aa		0.26	□□□□□ -2.37
URM1	YIL008W	NHP6A	P11632	93 aa	Known RBP	0.26	□□□□□ -2.37
URM1	YIL008W	YBR016W	P38216	128 aa		0.26	□□□□□ -2.37
URM1	YIL008W	RSM18	P40033	138 aa		0.26	□□□□□ -2.37
URM1	YIL008W	YER187W	P40102	141 aa		0.26	□□□□□ -2.37
URM1	YIL008W	SFT1	P43682	97 aa		0.26	□□□□□ -2.37
URM1	YIL008W	SNN1	P48232	102 aa		0.26	□□□□□ -2.37
URM1	YIL008W	YGL230C	P53074	147 aa		0.26	□□□□□ -2.37
URM1	YIL008W	MRPS12	P53732	153 aa		0.26	□□□□□ -2.37
URM1	YIL008W	COF1	Q03048	143 aa	Known RBP	0.26	□□□□□ -2.37
URM1	YIL008W	IRC21	Q04772	201 aa		0.26	□□□□□ -2.37
URM1	YIL008W	YPL261C	Q08976	102 aa		0.26	□□□□□ -2.37
URM1	YIL008W	YDL157C	Q12082	118 aa		0.26	□□□□□ -2.37
URM1	YIL008W	YDL022C-A	P0C5L6	82 aa		0.25	□□□□□ -2.37
URM1	YIL008W	EDC1	P53080	175 aa	Predicted RBP	0.25	□□□□□ -2.37
URM1	YIL008W	YMR103C	Q04436	120 aa		0.25	□□□□□ -2.37
URM1	YIL008W	PAU23	Q07987	124 aa		0.25	□□□□□ -2.37
URM1	YIL008W	YLR361C-A	Q3E795	98 aa		0.25	□□□□□ -2.37
URM1	YIL008W	YDL085C-A	Q3E7B7	68 aa	Known RBP	0.25	□□□□□ -2.37
URM1	YIL008W	YML054C-A	Q3E809	52 aa		0.25	□□□□□ -2.37
URM1	YIL008W	NHP2	P32495	156 aa	Predicted RBP	0.24	□□□□□ -2.37
URM1	YIL008W	FYV4	P38783	130 aa	Predicted RBP	0.24	□□□□□ -2.37
URM1	YIL008W	YGR164W	P53291	111 aa		0.24	□□□□□ -2.37
URM1	YIL008W	HHO1	P53551	258 aa		0.24	□□□□□ -2.37
URM1	YIL008W	RSM19	P53733	91 aa	Predicted RBP	0.24	□□□□□ -2.37
URM1	YIL008W	ARL3	Q02804	198 aa		0.24	□□□□□ -2.37
URM1	YIL008W	YPR153W	Q06537	140 aa		0.24	□□□□□ -2.37
URM1	YIL008W	YLR050C	Q12155	161 aa	Known RBP	0.24	□□□□□ -2.37
URM1	YIL008W	YOR034C-A	Q3E735	80 aa		0.24	□□□□□ -2.37
URM1	YIL008W	YJL133C-A	Q3E7A3	74 aa		0.24	□□□□□ -2.37
URM1	YIL008W	VMA9	Q3E7B6	73 aa		0.24	□□□□□ -2.37
URM1	YIL008W	SCS22	Q6Q595	175 aa		0.24	□□□□□ -2.37
URM1	YIL008W	MIC10	Q96VH5	97 aa		0.24	□□□□□ -2.37
URM1	YIL008W	YLR255C	O13574	117 aa		0.23	□□□□□ -2.37
URM1	YIL008W	YOL013W-A	P0C272	63 aa	Predicted RBP	0.23	□□□□□ -2.37
URM1	YIL008W	SRB6	P32570	121 aa		0.23	□□□□□ -2.37
URM1	YIL008W	YHR130C	P38834	111 aa		0.23	□□□□□ -2.37
URM1	YIL008W	VMA21	P41806	77 aa		0.23	□□□□□ -2.37
URM1	YIL008W	ATP14	Q12349	124 aa		0.23	□□□□□ -2.37
URM1	YIL008W	YOR381W-A	Q3E804	55 aa		0.23	□□□□□ -2.37
URM1	YIL008W	YOR316C-A	Q3E806	69 aa		0.23	□□□□□ -2.37
URM1	YIL008W	RPL36A	P05745	100 aa	Predicted RBP	0.22	□□□□□ -2.37
URM1	YIL008W	YKL044W	P36092	106 aa		0.22	□□□□□ -2.37
URM1	YIL008W	ATG8	P38182	117 aa	RIP-Chip data	0.22	□□□□□ -2.37	not detected
URM1	YIL008W	YBL044W	P38194	122 aa		0.22	□□□□□ -2.37
URM1	YIL008W	ICS3	P47034	131 aa		0.22	□□□□□ -2.37
URM1	YIL008W	COA6	Q3E846	104 aa		0.22	□□□□□ -2.37
URM1	YIL008W	YHR213W-B	Q8TGK1	99 aa		0.22	□□□□□ -2.37
URM1	YIL008W	YOR304C-A	O14468	76 aa		0.21	□□□□□ -2.38
URM1	YIL008W	YFR009W-A	P0C5M9	85 aa		0.21	□□□□□ -2.38
URM1	YIL008W	YJR107C-A	P0CT86	78 aa		0.21	□□□□□ -2.38
URM1	YIL008W	MRPL44	P19956	98 aa		0.21	□□□□□ -2.38
URM1	YIL008W	AIM4	P38305	123 aa	Predicted RBP	0.21	□□□□□ -2.38
URM1	YIL008W	TDA2	P40045	126 aa		0.21	□□□□□ -2.38
URM1	YIL008W	HUR1	P45820	110 aa		0.21	□□□□□ -2.38
URM1	YIL008W	ZEO1	Q08245	113 aa		0.21	□□□□□ -2.38
URM1	YIL008W	RPS30A	P0CX33	63 aa	Known RBP	0.2	□□□□□ -2.38
URM1	YIL008W	RPS30B	P0CX34	63 aa	Known RBP	0.2	□□□□□ -2.38
URM1	YIL008W	COX23	P38824	151 aa		0.2	□□□□□ -2.38
URM1	YIL008W	HHY1	P39982	102 aa		0.2	□□□□□ -2.38
URM1	YIL008W	MSL1	P40567	111 aa	Predicted RBP	0.2	□□□□□ -2.38
URM1	YIL008W	GTT1	P40582	234 aa		0.2	□□□□□ -2.38
URM1	YIL008W	TIM11	P81449	96 aa	Predicted RBP	0.2	□□□□□ -2.38
URM1	YIL008W	ATP18	P81450	59 aa		0.2	□□□□□ -2.38
URM1	YIL008W	ELC1	Q03071	99 aa		0.2	□□□□□ -2.38
URM1	YIL008W	LIP1	Q03579	150 aa		0.2	□□□□□ -2.38
URM1	YIL008W	YLR296W	Q05898	108 aa		0.2	□□□□□ -2.38
URM1	YIL008W	CNL1	Q06333	122 aa		0.2	□□□□□ -2.38
URM1	YIL008W	YIL156W-B	Q2V2P4	73 aa		0.2	□□□□□ -2.38
URM1	YIL008W	YCR050C	P25630	102 aa		0.19	□□□□□ -2.38
URM1	YIL008W	SSS1	P35179	80 aa		0.19	□□□□□ -2.38
URM1	YIL008W	POP7	P38291	140 aa		0.19	□□□□□ -2.38

Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms