RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W ATP18P81450 59 aa9.13□□□□□ -0.95
RPN10YHR200W PBI2P0CT04 75 aaKnown RBP9.1□□□□□ -0.95
RPN10YHR200W BSC4P53841 131 aa9.1□□□□□ -0.95
RPN10YHR200W YBL112CQ3E7Y4 105 aa9.1□□□□□ -0.95
RPN10YHR200W YOR072WQ08486 104 aa9.09□□□□□ -0.95
RPN10YHR200W YGR121W-AQ3E816 71 aa9.09□□□□□ -0.95
RPN10YHR200W GIS2P53849 153 aaKnown RBP RIP-Chip data9.08□□□□□ -0.96not detected
RPN10YHR200W RPL36BO14455 100 aaKnown RBP9.07□□□□□ -0.96
RPN10YHR200W EDC2P40023 145 aaPredicted RBP9.07□□□□□ -0.96
RPN10YHR200W SPG1P50088 95 aa9.07□□□□□ -0.96
RPN10YHR200W YHR139C-AO13536 103 aa9.06□□□□□ -0.96
RPN10YHR200W YHR007C-AQ07074 71 aa9.06□□□□□ -0.96
RPN10YHR200W SLO1Q3E784 85 aa9.06□□□□□ -0.96
RPN10YHR200W KRE1P17260 313 aa9.05□□□□□ -0.96
RPN10YHR200W YFR009W-AP0C5M9 85 aa9.02□□□□□ -0.97
RPN10YHR200W RSM19P53733 91 aaPredicted RBP9.02□□□□□ -0.97
RPN10YHR200W INO4P13902 151 aa9.01□□□□□ -0.97
RPN10YHR200W YDR381C-AQ3E6R5 114 aa9.01□□□□□ -0.97
RPN10YHR200W SKI6P46948 246 aaPredicted RBP9□□□□□ -0.97
RPN10YHR200W YJR085CP47131 105 aaKnown RBP8.99□□□□□ -0.97
RPN10YHR200W ISD11Q6Q560 94 aa8.97□□□□□ -0.97
RPN10YHR200W RUB1Q03919 77 aa8.93□□□□□ -0.98
RPN10YHR200W YOR268CQ08734 132 aa8.93□□□□□ -0.98
RPN10YHR200W TDA8Q6B2U8 126 aa8.93□□□□□ -0.98
RPN10YHR200W YHR213W-BQ8TGK1 99 aa8.93□□□□□ -0.98
RPN10YHR200W TDA2P40045 126 aa8.92□□□□□ -0.98
RPN10YHR200W ICS3P47034 131 aa8.92□□□□□ -0.98
RPN10YHR200W YGL149WP53116 101 aa8.91□□□□□ -0.98
RPN10YHR200W EMC6Q12431 108 aa8.89□□□□□ -0.99
RPN10YHR200W DDR48P18899 430 aaKnown RBP8.88□□□□□ -0.99
RPN10YHR200W COX23P38824 151 aa8.88□□□□□ -0.99
RPN10YHR200W RSM18P40033 138 aa8.88□□□□□ -0.99
RPN10YHR200W YNL184CP53876 108 aa8.88□□□□□ -0.99
RPN10YHR200W RAD6P06104 172 aa8.87□□□□□ -0.99
RPN10YHR200W SHH4Q06236 168 aa8.87□□□□□ -0.99
RPN10YHR200W YAL063C-AQ3E791 96 aa8.87□□□□□ -0.99
RPN10YHR200W YJL133C-AQ3E7A3 74 aa8.87□□□□□ -0.99
RPN10YHR200W RPL38P49167 78 aaKnown RBP8.86□□□□□ -0.99
RPN10YHR200W YMR230W-AQ3E7B5 62 aa8.83□□□□□ -1
RPN10YHR200W YFL041W-AQ3E817 63 aa8.83□□□□□ -1
RPN10YHR200W EDC1P53080 175 aaPredicted RBP8.81□□□□□ -1
RPN10YHR200W ECM19Q06011 112 aa8.81□□□□□ -1
RPN10YHR200W YBR182C-AQ8TGU6 64 aa8.81□□□□□ -1
RPN10YHR200W YBR027CP38220 110 aa8.8□□□□□ -1
RPN10YHR200W YHL042WP38729 150 aa8.79□□□□□ -1
RPN10YHR200W YFL067WP43537 175 aa8.79□□□□□ -1
RPN10YHR200W YLR162WQ06235 118 aa8.79□□□□□ -1
RPN10YHR200W RPP2AP05319 106 aaKnown RBP8.77□□□□□ -1.01
RPN10YHR200W YLR157W-DP0CE99 70 aa8.77□□□□□ -1.01
RPN10YHR200W YFL065CP43539 102 aa8.77□□□□□ -1.01
RPN10YHR200W YPR203WQ08994 102 aa8.77□□□□□ -1.01
RPN10YHR200W SAP30P38429 201 aa8.76□□□□□ -1.01
RPN10YHR200W MIC10Q96VH5 97 aa8.76□□□□□ -1.01
RPN10YHR200W YSY6P38374 65 aa8.75□□□□□ -1.01
RPN10YHR200W ATP20Q12233 115 aa8.75□□□□□ -1.01
RPN10YHR200W YOR304C-AO14468 76 aa8.74□□□□□ -1.01
RPN10YHR200W YJL197C-AP0C5P0 93 aa8.73□□□□□ -1.01
RPN10YHR200W KSH1Q8TGJ3 72 aa8.73□□□□□ -1.01
RPN10YHR200W YEL045CP32616 141 aa8.72□□□□□ -1.01
RPN10YHR200W COF1Q03048 143 aaKnown RBP8.72□□□□□ -1.01
RPN10YHR200W YLR285C-AQ3E771 56 aa8.72□□□□□ -1.01
RPN10YHR200W KTI11Q3E840 82 aa8.72□□□□□ -1.01
RPN10YHR200W YCR050CP25630 102 aa8.71□□□□□ -1.02
RPN10YHR200W YOL097W-AQ3E7Y9 61 aa8.71□□□□□ -1.02
RPN10YHR200W YOL014WQ08110 124 aa8.7□□□□□ -1.02
RPN10YHR200W YDR010CQ12426 110 aa8.67□□□□□ -1.02
RPN10YHR200W YKL183C-AQ3E765 70 aa8.64□□□□□ -1.03
RPN10YHR200W HOT13P36078 116 aa8.59□□□□□ -1.03
RPN10YHR200W YCR043CP25361 127 aa8.55□□□□□ -1.04
RPN10YHR200W YHL018WP38744 120 aaPredicted RBP8.55□□□□□ -1.04
RPN10YHR200W YHL005CP38752 130 aa8.54□□□□□ -1.04
RPN10YHR200W SOH1P38633 127 aa8.52□□□□□ -1.05
RPN10YHR200W YGR039WP53225 103 aa8.52□□□□□ -1.05
RPN10YHR200W YAR064WP39563 99 aa8.51□□□□□ -1.05
RPN10YHR200W RPL36AP05745 100 aaPredicted RBP8.49□□□□□ -1.05
RPN10YHR200W YOR314WQ12506 109 aa8.47□□□□□ -1.05
RPN10YHR200W COX7P10174 60 aa8.45□□□□□ -1.06
RPN10YHR200W YIL002W-AQ3E7Z5 69 aa8.45□□□□□ -1.06
RPN10YHR200W YPL038W-AQ3E7B4 63 aa8.44□□□□□ -1.06
RPN10YHR200W YKL069WP36088 180 aa8.43□□□□□ -1.06
RPN10YHR200W YDR119W-AQ2V2P9 66 aa8.43□□□□□ -1.06
RPN10YHR200W YHR073W-AP0C5N7 58 aa8.37□□□□□ -1.07
RPN10YHR200W YPL080CQ02826 108 aa8.32□□□□□ -1.08
RPN10YHR200W YPR153WQ06537 140 aa8.32□□□□□ -1.08
RPN10YHR200W YDL012CQ12489 107 aa8.32□□□□□ -1.08
RPN10YHR200W YIL102CP40488 101 aa8.31□□□□□ -1.08
RPN10YHR200W CMC4Q3E7A9 73 aa8.31□□□□□ -1.08
RPN10YHR200W YER187WP40102 141 aa8.29□□□□□ -1.08
RPN10YHR200W NOP10Q6Q547 58 aaPredicted RBP8.29□□□□□ -1.08
RPN10YHR200W YLR361C-AQ3E795 98 aa8.27□□□□□ -1.09
RPN10YHR200W YNL122CP53921 115 aaPredicted RBP8.26□□□□□ -1.09
RPN10YHR200W LIP1Q03579 150 aa8.26□□□□□ -1.09
RPN10YHR200W YOL013W-AP0C272 63 aaPredicted RBP8.25□□□□□ -1.09
RPN10YHR200W TOM6P33448 61 aa8.23□□□□□ -1.09
RPN10YHR200W AIM4P38305 123 aaPredicted RBP8.23□□□□□ -1.09
RPN10YHR200W YDR246W-AQ3E763 66 aa8.2□□□□□ -1.1
RPN10YHR200W YDR182W-AQ3E796 67 aa8.19□□□□□ -1.1
RPN10YHR200W HHF1P02309 103 aaKnown RBP8.17□□□□□ -1.1
RPN10YHR200W YGR164WP53291 111 aa8.14□□□□□ -1.11
RPN10YHR200W YOR316C-AQ3E806 69 aa8.13□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms