RNA–Protein interactions for RNA: YGL244W

RTF1, Transcript of Subunit of RNAPII-associated chromatin remodeling Paf1 complex, yeastyeast

Gene RTF1, Length 1,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTF1YGL244W RPL11AP0C0W9 174 aaKnown RBP8.11□□□□□ -1.11
RTF1YGL244W RSM18P40033 138 aa8.11□□□□□ -1.11
RTF1YGL244W ATP20Q12233 115 aa8.11□□□□□ -1.11
RTF1YGL244W FYV5P25585 152 aa8.09□□□□□ -1.11
RTF1YGL244W YGR035W-AQ45U48 73 aa8.09□□□□□ -1.11
RTF1YGL244W AIM4P38305 123 aaPredicted RBP8.08□□□□□ -1.12
RTF1YGL244W YBR230W-AQ3E762 66 aa8.07□□□□□ -1.12
RTF1YGL244W SFT1P43682 97 aa8.06□□□□□ -1.12
RTF1YGL244W DIF1O13577 133 aa8.05□□□□□ -1.12
RTF1YGL244W ICS3P47034 131 aa8.05□□□□□ -1.12
RTF1YGL244W YJL127C-BQ3E828 52 aa8.05□□□□□ -1.12
RTF1YGL244W RPL11BQ3E757 174 aaPredicted RBP8.05□□□□□ -1.12
RTF1YGL244W IGD1P43598 195 aa8.04□□□□□ -1.12
RTF1YGL244W SPC1P46965 94 aa8.04□□□□□ -1.12
RTF1YGL244W YDR115WQ04598 105 aa8.04□□□□□ -1.12
RTF1YGL244W STF1P01098 86 aa8.03□□□□□ -1.12
RTF1YGL244W YRA2P36036 203 aaKnown RBP RIP-Chip data8.03□□□□□ -1.12not detected
RTF1YGL244W YOR314WQ12506 109 aa8.02□□□□□ -1.13
RTF1YGL244W SBH1P52870 82 aa8.02□□□□□ -1.13
RTF1YGL244W BET1P22804 142 aa8□□□□□ -1.13
RTF1YGL244W COX23P38824 151 aa8□□□□□ -1.13
RTF1YGL244W YLR307C-AQ3E825 87 aa8□□□□□ -1.13
RTF1YGL244W NOP10Q6Q547 58 aaPredicted RBP7.98□□□□□ -1.13
RTF1YGL244W EDC2P40023 145 aaPredicted RBP7.98□□□□□ -1.13
RTF1YGL244W YOL014WQ08110 124 aa7.98□□□□□ -1.13
RTF1YGL244W YNL042W-BQ3E7Z2 85 aa7.98□□□□□ -1.13
RTF1YGL244W YHR213W-BQ8TGK1 99 aa7.97□□□□□ -1.13
RTF1YGL244W YLL066W-BQ8TGJ7 56 aa7.96□□□□□ -1.13
RTF1YGL244W Q0032Q9ZZX7 96 aa7.96□□□□□ -1.13
RTF1YGL244W AIR2Q12476 344 aaKnown RBP7.94□□□□□ -1.14
RTF1YGL244W RRT15Q3E811 62 aa7.94□□□□□ -1.14
RTF1YGL244W RTC6O14464 93 aa7.93□□□□□ -1.14
RTF1YGL244W UTP20P35194 2493 aaKnown RBP7.92□□□□□ -1.14
RTF1YGL244W YJL133C-AQ3E7A3 74 aa7.92□□□□□ -1.14
RTF1YGL244W YGL015CP33199 130 aa7.91□□□□□ -1.14
RTF1YGL244W YDR182W-AQ3E796 67 aa7.91□□□□□ -1.14
RTF1YGL244W SNA2P56508 79 aa7.9□□□□□ -1.14
RTF1YGL244W YAR023CD6VPM8 179 aa7.89□□□□□ -1.15
RTF1YGL244W RPL36BO14455 100 aaKnown RBP7.89□□□□□ -1.15
RTF1YGL244W RPL36AP05745 100 aaPredicted RBP7.89□□□□□ -1.15
RTF1YGL244W TOR1P35169 2470 aa7.87□□□□□ -1.15
RTF1YGL244W KTI11Q3E840 82 aa7.87□□□□□ -1.15
RTF1YGL244W YOL166W-AQ8TGJ1 51 aa7.87□□□□□ -1.15
RTF1YGL244W SPT4P32914 102 aaPredicted RBP7.86□□□□□ -1.15
RTF1YGL244W YGL041C-BQ3E750 60 aa7.85□□□□□ -1.15
RTF1YGL244W ECM19Q06011 112 aa7.83□□□□□ -1.16
RTF1YGL244W TDA8Q6B2U8 126 aa7.83□□□□□ -1.16
RTF1YGL244W KSH1Q8TGJ3 72 aa7.83□□□□□ -1.16
RTF1YGL244W YBR121C-AP0C5L4 52 aa7.82□□□□□ -1.16
RTF1YGL244W YCL042WP25572 119 aa7.82□□□□□ -1.16
RTF1YGL244W YHR007C-AQ07074 71 aa7.81□□□□□ -1.16
RTF1YGL244W BSC4P53841 131 aa7.8□□□□□ -1.16
RTF1YGL244W DDR2P89113 61 aa7.8□□□□□ -1.16
RTF1YGL244W YHL005CP38752 130 aa7.79□□□□□ -1.16
RTF1YGL244W YIL102CP40488 101 aa7.79□□□□□ -1.16
RTF1YGL244W YOR072WQ08486 104 aa7.79□□□□□ -1.16
RTF1YGL244W YEL045CP32616 141 aa7.78□□□□□ -1.16
RTF1YGL244W HOT13P36078 116 aa7.78□□□□□ -1.16
RTF1YGL244W LIP1Q03579 150 aa7.78□□□□□ -1.16
RTF1YGL244W YGL193CP53097 103 aa7.77□□□□□ -1.17
RTF1YGL244W YLR162WQ06235 118 aa7.76□□□□□ -1.17
RTF1YGL244W MIC10Q96VH5 97 aa7.76□□□□□ -1.17
RTF1YGL244W RPS28BP0C0X0 67 aaKnown RBP7.75□□□□□ -1.17
RTF1YGL244W YGR164WP53291 111 aa7.75□□□□□ -1.17
RTF1YGL244W YLR412C-AQ3E742 68 aa7.75□□□□□ -1.17
RTF1YGL244W RPS28AQ3E7X9 67 aaPredicted RBP7.75□□□□□ -1.17
RTF1YGL244W PEX22P39718 180 aa7.74□□□□□ -1.17
RTF1YGL244W GIS2P53849 153 aaKnown RBP RIP-Chip data7.74□□□□□ -1.17 RIP-Chip
RTF1YGL244W RPS30AP0CX33 63 aaKnown RBP7.73□□□□□ -1.17
RTF1YGL244W RPS30BP0CX34 63 aaKnown RBP7.73□□□□□ -1.17
RTF1YGL244W YBR182C-AQ8TGU6 64 aa7.73□□□□□ -1.17
RTF1YGL244W YGR121W-AQ3E816 71 aa7.71□□□□□ -1.18
RTF1YGL244W YLR122CQ12312 125 aa7.7□□□□□ -1.18
RTF1YGL244W YOL013W-AP0C272 63 aaPredicted RBP7.69□□□□□ -1.18
RTF1YGL244W AUA1P32450 94 aa7.67□□□□□ -1.18
RTF1YGL244W YOR381W-AQ3E804 55 aa7.67□□□□□ -1.18
RTF1YGL244W NUM1Q00402 2748 aa7.66□□□□□ -1.18
RTF1YGL244W YOR268CQ08734 132 aa7.65□□□□□ -1.18
RTF1YGL244W YAR064WP39563 99 aa7.64□□□□□ -1.19
RTF1YGL244W YJL197C-AP0C5P0 93 aa7.62□□□□□ -1.19
RTF1YGL244W YKL065W-AQ2V2P2 73 aa7.6□□□□□ -1.19
RTF1YGL244W YMR230W-AQ3E7B5 62 aa7.6□□□□□ -1.19
RTF1YGL244W YMR122CQ03879 124 aa7.57□□□□□ -1.2
RTF1YGL244W MRP10O75012 95 aa7.55□□□□□ -1.2
RTF1YGL244W CUP1-1P0CX80 61 aa7.55□□□□□ -1.2
RTF1YGL244W CUP1-2P0CX81 61 aa7.55□□□□□ -1.2
RTF1YGL244W YCR043CP25361 127 aa7.55□□□□□ -1.2
RTF1YGL244W YDR034C-AP0C289 58 aa7.54□□□□□ -1.2
RTF1YGL244W YHR125WP38831 101 aa7.52□□□□□ -1.21
RTF1YGL244W SDH6Q3E785 79 aa7.51□□□□□ -1.21
RTF1YGL244W HHF1P02309 103 aaKnown RBP7.49□□□□□ -1.21
RTF1YGL244W YBR027CP38220 110 aa7.49□□□□□ -1.21
RTF1YGL244W YPR153WQ06537 140 aa7.49□□□□□ -1.21
RTF1YGL244W OST5Q92316 86 aa7.48□□□□□ -1.21
RTF1YGL244W YER188C-AP0C0V2 99 aa7.47□□□□□ -1.21
RTF1YGL244W YLR157W-DP0CE99 70 aa7.47□□□□□ -1.21
RTF1YGL244W HUB1Q6Q546 73 aa7.47□□□□□ -1.21
RTF1YGL244W SPG1P50088 95 aa7.47□□□□□ -1.21
RTF1YGL244W YNL277W-AQ3E7Z0 62 aa7.47□□□□□ -1.21
RTF1YGL244W YPR195CQ06594 109 aa7.46□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 50.2 ms