RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeastyeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE10YGL228W DDR2P89113 61 aa3.56□□□□□ -1.84
SHE10YGL228W RPA12P32529 125 aaKnown RBP3.55□□□□□ -1.84
SHE10YGL228W YJR107C-AP0CT86 78 aa3.54□□□□□ -1.84
SHE10YGL228W SPT4P32914 102 aaPredicted RBP3.54□□□□□ -1.84
SHE10YGL228W YLR361C-AQ3E795 98 aa3.54□□□□□ -1.84
SHE10YGL228W YER175W-AQ8TGU4 54 aa3.54□□□□□ -1.84
SHE10YGL228W BSC4P53841 131 aa3.53□□□□□ -1.84
SHE10YGL228W YER039C-AP0CD97 72 aa3.53□□□□□ -1.85
SHE10YGL228W BET1P22804 142 aa3.53□□□□□ -1.85
SHE10YGL228W YHR007C-AQ07074 71 aa3.53□□□□□ -1.85
SHE10YGL228W OST2P46964 130 aa3.52□□□□□ -1.85
SHE10YGL228W ATP18P81450 59 aa3.51□□□□□ -1.85
SHE10YGL228W YFR009W-AP0C5M9 85 aa3.5□□□□□ -1.85
SHE10YGL228W DDR48P18899 430 aaKnown RBP3.5□□□□□ -1.85
SHE10YGL228W RUB1Q03919 77 aa3.5□□□□□ -1.85
SHE10YGL228W YMR230W-AQ3E7B5 62 aa3.5□□□□□ -1.85
SHE10YGL228W PBI2P0CT04 75 aaKnown RBP3.5□□□□□ -1.85
SHE10YGL228W EDC2P40023 145 aaPredicted RBP3.5□□□□□ -1.85
SHE10YGL228W YOR072WQ08486 104 aa3.5□□□□□ -1.85
SHE10YGL228W SLO1Q3E784 85 aa3.5□□□□□ -1.85
SHE10YGL228W YLR415CO13578 112 aa3.49□□□□□ -1.85
SHE10YGL228W RPL36BO14455 100 aaKnown RBP3.49□□□□□ -1.85
SHE10YGL228W ATX1P38636 73 aa3.49□□□□□ -1.85
SHE10YGL228W SFT1P43682 97 aa3.49□□□□□ -1.85
SHE10YGL228W YBL112CQ3E7Y4 105 aa3.49□□□□□ -1.85
SHE10YGL228W YDR381C-AQ3E6R5 114 aa3.48□□□□□ -1.85
SHE10YGL228W TSC3Q3E790 80 aa3.48□□□□□ -1.85
SHE10YGL228W YGR121W-AQ3E816 71 aa3.48□□□□□ -1.85
SHE10YGL228W INO4P13902 151 aa3.47□□□□□ -1.85
SHE10YGL228W EDC1P53080 175 aaPredicted RBP3.47□□□□□ -1.85
SHE10YGL228W YHR139C-AO13536 103 aa3.47□□□□□ -1.85
SHE10YGL228W SPG1P50088 95 aa3.47□□□□□ -1.85
SHE10YGL228W YOR304C-AO14468 76 aa3.46□□□□□ -1.86
SHE10YGL228W YIR021W-AQ3E739 70 aa3.46□□□□□ -1.86
SHE10YGL228W RSM18P40033 138 aa3.45□□□□□ -1.86
SHE10YGL228W YJR085CP47131 105 aaKnown RBP3.45□□□□□ -1.86
SHE10YGL228W YGL149WP53116 101 aa3.45□□□□□ -1.86
SHE10YGL228W YOR268CQ08734 132 aa3.45□□□□□ -1.86
SHE10YGL228W KRE1P17260 313 aa3.44□□□□□ -1.86
SHE10YGL228W YBR027CP38220 110 aa3.44□□□□□ -1.86
SHE10YGL228W YFL067WP43537 175 aa3.44□□□□□ -1.86
SHE10YGL228W YCR085WP25650 117 aa3.44□□□□□ -1.86
SHE10YGL228W SKI6P46948 246 aaPredicted RBP3.44□□□□□ -1.86
SHE10YGL228W ICS3P47034 131 aa3.44□□□□□ -1.86
SHE10YGL228W TDA8Q6B2U8 126 aa3.44□□□□□ -1.86
SHE10YGL228W YHR213W-BQ8TGK1 99 aa3.44□□□□□ -1.86
SHE10YGL228W YNL184CP53876 108 aa3.43□□□□□ -1.86
SHE10YGL228W RPL38P49167 78 aaKnown RBP3.42□□□□□ -1.86
SHE10YGL228W SHH4Q06236 168 aa3.42□□□□□ -1.86
SHE10YGL228W YJL133C-AQ3E7A3 74 aa3.42□□□□□ -1.86
SHE10YGL228W RAD6P06104 172 aa3.41□□□□□ -1.86
SHE10YGL228W RSM19P53733 91 aaPredicted RBP3.41□□□□□ -1.86
SHE10YGL228W YOL014WQ08110 124 aa3.41□□□□□ -1.86
SHE10YGL228W YAL063C-AQ3E791 96 aa3.41□□□□□ -1.86
SHE10YGL228W YJL197C-AP0C5P0 93 aa3.41□□□□□ -1.86
SHE10YGL228W COX23P38824 151 aa3.4□□□□□ -1.87
SHE10YGL228W ECM19Q06011 112 aa3.4□□□□□ -1.87
SHE10YGL228W YDR010CQ12426 110 aa3.39□□□□□ -1.87
SHE10YGL228W ISD11Q6Q560 94 aa3.39□□□□□ -1.87
SHE10YGL228W TDA2P40045 126 aa3.39□□□□□ -1.87
SHE10YGL228W YLR162WQ06235 118 aa3.39□□□□□ -1.87
SHE10YGL228W MIC10Q96VH5 97 aa3.39□□□□□ -1.87
SHE10YGL228W YEL045CP32616 141 aa3.37□□□□□ -1.87
SHE10YGL228W YFL065CP43539 102 aa3.37□□□□□ -1.87
SHE10YGL228W COF1Q03048 143 aaKnown RBP3.37□□□□□ -1.87
SHE10YGL228W YPR203WQ08994 102 aa3.37□□□□□ -1.87
SHE10YGL228W EMC6Q12431 108 aa3.36□□□□□ -1.87
SHE10YGL228W YFL041W-AQ3E817 63 aa3.36□□□□□ -1.87
SHE10YGL228W HOT13P36078 116 aa3.35□□□□□ -1.87
SHE10YGL228W ATP20Q12233 115 aa3.34□□□□□ -1.87
SHE10YGL228W YLR285C-AQ3E771 56 aa3.34□□□□□ -1.87
SHE10YGL228W KTI11Q3E840 82 aa3.33□□□□□ -1.88
SHE10YGL228W YLR157W-DP0CE99 70 aa3.33□□□□□ -1.88
SHE10YGL228W YHL042WP38729 150 aa3.33□□□□□ -1.88
SHE10YGL228W YCR043CP25361 127 aa3.32□□□□□ -1.88
SHE10YGL228W YOL097W-AQ3E7Y9 61 aa3.32□□□□□ -1.88
SHE10YGL228W KSH1Q8TGJ3 72 aa3.32□□□□□ -1.88
SHE10YGL228W YSY6P38374 65 aa3.3□□□□□ -1.88
SHE10YGL228W YCR050CP25630 102 aa3.29□□□□□ -1.88
SHE10YGL228W YHL005CP38752 130 aa3.27□□□□□ -1.89
SHE10YGL228W YGL034CP53186 121 aa3.27□□□□□ -1.89
SHE10YGL228W YGR039WP53225 103 aa3.27□□□□□ -1.89
SHE10YGL228W YHL018WP38744 120 aaPredicted RBP3.27□□□□□ -1.89
SHE10YGL228W YAR064WP39563 99 aa3.27□□□□□ -1.89
SHE10YGL228W YNL277W-AQ3E7Z0 62 aa3.27□□□□□ -1.89
SHE10YGL228W YDR119W-AQ2V2P9 66 aa3.26□□□□□ -1.89
SHE10YGL228W YDL012CQ12489 107 aa3.25□□□□□ -1.89
SHE10YGL228W YLR412C-AQ3E742 68 aa3.24□□□□□ -1.89
SHE10YGL228W RPL36AP05745 100 aaPredicted RBP3.24□□□□□ -1.89
SHE10YGL228W SBH1P52870 82 aa3.22□□□□□ -1.89
SHE10YGL228W YPL038W-AQ3E7B4 63 aa3.21□□□□□ -1.9
SHE10YGL228W NOP10Q6Q547 58 aaPredicted RBP3.21□□□□□ -1.9
SHE10YGL228W YPR153WQ06537 140 aa3.2□□□□□ -1.9
SHE10YGL228W YOR314WQ12506 109 aa3.2□□□□□ -1.9
SHE10YGL228W YDR246W-AQ3E763 66 aa3.2□□□□□ -1.9
SHE10YGL228W YHR073W-AP0C5N7 58 aa3.19□□□□□ -1.9
SHE10YGL228W COX7P10174 60 aa3.19□□□□□ -1.9
SHE10YGL228W YIL102CP40488 101 aa3.19□□□□□ -1.9
SHE10YGL228W YER187WP40102 141 aa3.18□□□□□ -1.9
SHE10YGL228W YOL013W-AP0C272 63 aaPredicted RBP3.17□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 29.6 ms