RNA–Protein interactions for RNA: YGL103W

RPL28, Transcript of Ribosomal 60S subunit protein L28, yeastyeast

Gene RPL28, Length 450 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL28YGL103W YBL081WP38180 368 aaKnown RBP3.52□□□□□ -1.85
RPL28YGL103W GAT4P40569 121 aa3.52□□□□□ -1.85
RPL28YGL103W ICS3P47034 131 aa3.52□□□□□ -1.85
RPL28YGL103W SBH1P52870 82 aa3.52□□□□□ -1.85
RPL28YGL103W YBR230W-AQ3E762 66 aa3.52□□□□□ -1.85
RPL28YGL103W YNL162W-AQ3E7A8 72 aa3.52□□□□□ -1.85
RPL28YGL103W YJL127C-BQ3E828 52 aa3.52□□□□□ -1.85
RPL28YGL103W YGR035W-AQ45U48 73 aa3.52□□□□□ -1.85
RPL28YGL103W RPL33AP05744 107 aaKnown RBP3.51□□□□□ -1.85
RPL28YGL103W RPL43AP0CX25 92 aaKnown RBP3.51□□□□□ -1.85
RPL28YGL103W RPL43BP0CX26 92 aa3.51□□□□□ -1.85
RPL28YGL103W RPL33BP41056 107 aaKnown RBP3.51□□□□□ -1.85
RPL28YGL103W SFT1P43682 97 aa3.51□□□□□ -1.85
RPL28YGL103W RDS3Q06835 107 aaPredicted RBP3.51□□□□□ -1.85
RPL28YGL103W YDR246W-AQ3E763 66 aa3.51□□□□□ -1.85
RPL28YGL103W Q0032Q9ZZX7 96 aa3.5□□□□□ -1.85
RPL28YGL103W COX23P38824 151 aa3.49□□□□□ -1.85
RPL28YGL103W EDC2P40023 145 aaPredicted RBP3.49□□□□□ -1.85
RPL28YGL103W IGD1P43598 195 aa3.49□□□□□ -1.85
RPL28YGL103W SPC1P46965 94 aa3.49□□□□□ -1.85
RPL28YGL103W NOP10Q6Q547 58 aaPredicted RBP3.49□□□□□ -1.85
RPL28YGL103W YHR213W-BQ8TGK1 99 aa3.49□□□□□ -1.85
RPL28YGL103W YIL102CP40488 101 aa3.48□□□□□ -1.85
RPL28YGL103W SNA2P56508 79 aa3.48□□□□□ -1.85
RPL28YGL103W URA2P07259 2214 aaKnown RBP3.48□□□□□ -1.85
RPL28YGL103W YOL014WQ08110 124 aa3.47□□□□□ -1.85
RPL28YGL103W YJL133C-AQ3E7A3 74 aa3.47□□□□□ -1.85
RPL28YGL103W YNL042W-BQ3E7Z2 85 aa3.47□□□□□ -1.85
RPL28YGL103W RRT15Q3E811 62 aa3.47□□□□□ -1.85
RPL28YGL103W YAR023CD6VPM8 179 aa3.46□□□□□ -1.86
RPL28YGL103W YBR121C-AP0C5L4 52 aa3.46□□□□□ -1.86
RPL28YGL103W YDR115WQ04598 105 aa3.46□□□□□ -1.86
RPL28YGL103W KTI11Q3E840 82 aa3.46□□□□□ -1.86
RPL28YGL103W RPL36BO14455 100 aaKnown RBP3.45□□□□□ -1.86
RPL28YGL103W RTC6O14464 93 aa3.45□□□□□ -1.86
RPL28YGL103W RPL36AP05745 100 aaPredicted RBP3.45□□□□□ -1.86
RPL28YGL103W STF1P01098 86 aa3.44□□□□□ -1.86
RPL28YGL103W YDR182W-AQ3E796 67 aa3.44□□□□□ -1.86
RPL28YGL103W YLR307C-AQ3E825 87 aa3.44□□□□□ -1.86
RPL28YGL103W YHL005CP38752 130 aa3.43□□□□□ -1.86
RPL28YGL103W YHR007C-AQ07074 71 aa3.43□□□□□ -1.86
RPL28YGL103W YGL041C-BQ3E750 60 aa3.43□□□□□ -1.86
RPL28YGL103W KSH1Q8TGJ3 72 aa3.43□□□□□ -1.86
RPL28YGL103W SPT4P32914 102 aaPredicted RBP3.42□□□□□ -1.86
RPL28YGL103W BSC4P53841 131 aa3.42□□□□□ -1.86
RPL28YGL103W DDR2P89113 61 aa3.42□□□□□ -1.86
RPL28YGL103W LIP1Q03579 150 aa3.42□□□□□ -1.86
RPL28YGL103W ECM19Q06011 112 aa3.42□□□□□ -1.86
RPL28YGL103W TDA8Q6B2U8 126 aa3.42□□□□□ -1.86
RPL28YGL103W YLL066W-BQ8TGJ7 56 aa3.42□□□□□ -1.86
RPL28YGL103W RPS30AP0CX33 63 aaKnown RBP3.41□□□□□ -1.86
RPL28YGL103W RPS30BP0CX34 63 aaKnown RBP3.41□□□□□ -1.86
RPL28YGL103W YOR072WQ08486 104 aa3.41□□□□□ -1.86
RPL28YGL103W YOL166W-AQ8TGJ1 51 aa3.41□□□□□ -1.86
RPL28YGL103W TOR1P35169 2470 aa3.41□□□□□ -1.86
RPL28YGL103W YCL042WP25572 119 aa3.4□□□□□ -1.87
RPL28YGL103W YOR381W-AQ3E804 55 aa3.4□□□□□ -1.87
RPL28YGL103W NUM1Q00402 2748 aa3.4□□□□□ -1.87
RPL28YGL103W PRP8P33334 2413 aaKnown RBP3.4□□□□□ -1.87
RPL28YGL103W RPS28BP0C0X0 67 aaKnown RBP3.39□□□□□ -1.87
RPL28YGL103W YLR162WQ06235 118 aa3.39□□□□□ -1.87
RPL28YGL103W YLR412C-AQ3E742 68 aa3.39□□□□□ -1.87
RPL28YGL103W RPS28AQ3E7X9 67 aaPredicted RBP3.39□□□□□ -1.87
RPL28YGL103W YBR182C-AQ8TGU6 64 aa3.39□□□□□ -1.87
RPL28YGL103W PEX22P39718 180 aa3.38□□□□□ -1.87
RPL28YGL103W YGR164WP53291 111 aa3.38□□□□□ -1.87
RPL28YGL103W MIC10Q96VH5 97 aa3.38□□□□□ -1.87
RPL28YGL103W CUP1-1P0CX80 61 aa3.37□□□□□ -1.87
RPL28YGL103W CUP1-2P0CX81 61 aa3.37□□□□□ -1.87
RPL28YGL103W YEL045CP32616 141 aa3.37□□□□□ -1.87
RPL28YGL103W HOT13P36078 116 aa3.37□□□□□ -1.87
RPL28YGL103W YOR268CQ08734 132 aa3.37□□□□□ -1.87
RPL28YGL103W YLR122CQ12312 125 aa3.37□□□□□ -1.87
RPL28YGL103W YGR121W-AQ3E816 71 aa3.37□□□□□ -1.87
RPL28YGL103W TEL1P38110 2787 aa3.37□□□□□ -1.87
RPL28YGL103W YGL193CP53097 103 aa3.36□□□□□ -1.87
RPL28YGL103W YAR064WP39563 99 aa3.35□□□□□ -1.87
RPL28YGL103W MEC1P38111 2368 aa3.35□□□□□ -1.87
RPL28YGL103W YOL013W-AP0C272 63 aaPredicted RBP3.34□□□□□ -1.87
RPL28YGL103W GIS2P53849 153 aaKnown RBP RIP-Chip data3.34□□□□□ -1.87not detected
RPL28YGL103W YKL065W-AQ2V2P2 73 aa3.33□□□□□ -1.88
RPL28YGL103W YCR043CP25361 127 aa3.32□□□□□ -1.88
RPL28YGL103W YMR122CQ03879 124 aa3.32□□□□□ -1.88
RPL28YGL103W SDH6Q3E785 79 aa3.32□□□□□ -1.88
RPL28YGL103W YMR230W-AQ3E7B5 62 aa3.32□□□□□ -1.88
RPL28YGL103W YLR157W-DP0CE99 70 aa3.31□□□□□ -1.88
RPL28YGL103W OST5Q92316 86 aa3.31□□□□□ -1.88
RPL28YGL103W YDR034C-AP0C289 58 aa3.3□□□□□ -1.88
RPL28YGL103W YDR010CQ12426 110 aa3.3□□□□□ -1.88
RPL28YGL103W MRP10O75012 95 aa3.29□□□□□ -1.88
RPL28YGL103W YPR153WQ06537 140 aa3.29□□□□□ -1.88
RPL28YGL103W YNL277W-AQ3E7Z0 62 aa3.29□□□□□ -1.88
RPL28YGL103W HUB1Q6Q546 73 aa3.29□□□□□ -1.88
RPL28YGL103W YER188C-AP0C0V2 99 aa3.28□□□□□ -1.88
RPL28YGL103W AUA1P32450 94 aa3.28□□□□□ -1.88
RPL28YGL103W YHR125WP38831 101 aa3.28□□□□□ -1.88
RPL28YGL103W HHF1P02309 103 aaKnown RBP3.27□□□□□ -1.89
RPL28YGL103W YJL197C-AP0C5P0 93 aa3.27□□□□□ -1.89
RPL28YGL103W YBR027CP38220 110 aa3.26□□□□□ -1.89
RPL28YGL103W YMR001C-AQ8TGS9 76 aa3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 56.6 ms