RNA–Protein interactions for RNA: YGL006W

PMC1, Transcript of Vacuolar Ca2+ ATPase involved in depleting cytosol of Ca2+ ions, yeastyeast

Gene PMC1, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PMC1YGL006W YDR246W-AQ3E763 66 aa3.08□□□□□ -1.92
PMC1YGL006W HOT13P36078 116 aa3.08□□□□□ -1.92
PMC1YGL006W SFT1P43682 97 aa3.08□□□□□ -1.92
PMC1YGL006W YJL127C-BQ3E828 52 aa3.07□□□□□ -1.92
PMC1YGL006W NUM1Q00402 2748 aa3.07□□□□□ -1.92
PMC1YGL006W RPS30AP0CX33 63 aaKnown RBP3.07□□□□□ -1.92
PMC1YGL006W RPS30BP0CX34 63 aaKnown RBP3.07□□□□□ -1.92
PMC1YGL006W YMR175W-AQ3E766 64 aa3.07□□□□□ -1.92
PMC1YGL006W YAL065CO13511 128 aa3.07□□□□□ -1.92
PMC1YGL006W YOL014WQ08110 124 aa3.07□□□□□ -1.92
PMC1YGL006W DIF1O13577 133 aa3.06□□□□□ -1.92
PMC1YGL006W YHR212W-AP0CX91 67 aa3.06□□□□□ -1.92
PMC1YGL006W TDA8Q6B2U8 126 aa3.06□□□□□ -1.92
PMC1YGL006W YHR213W-BQ8TGK1 99 aa3.06□□□□□ -1.92
PMC1YGL006W Q0032Q9ZZX7 96 aa3.06□□□□□ -1.92
PMC1YGL006W YAR023CD6VPM8 179 aa3.06□□□□□ -1.92
PMC1YGL006W MMS2P53152 137 aa3.05□□□□□ -1.92
PMC1YGL006W LIP1Q03579 150 aa3.05□□□□□ -1.92
PMC1YGL006W FYV5P25585 152 aa3.05□□□□□ -1.92
PMC1YGL006W YBL081WP38180 368 aaKnown RBP3.05□□□□□ -1.92
PMC1YGL006W MIC10Q96VH5 97 aa3.05□□□□□ -1.92
PMC1YGL006W YJL133C-AQ3E7A3 74 aa3.04□□□□□ -1.92
PMC1YGL006W YBL039W-BP0C268 59 aa3.04□□□□□ -1.92
PMC1YGL006W MLF3P32047 452 aa3.04□□□□□ -1.92
PMC1YGL006W SNA2P56508 79 aa3.04□□□□□ -1.92
PMC1YGL006W YDR010CQ12426 110 aa3.03□□□□□ -1.92
PMC1YGL006W TRA1P38811 3744 aa3.03□□□□□ -1.92
PMC1YGL006W YPL278CQ08990 100 aa3.03□□□□□ -1.92
PMC1YGL006W RPL36BO14455 100 aaKnown RBP3.03□□□□□ -1.92
PMC1YGL006W RPL36AP05745 100 aaPredicted RBP3.03□□□□□ -1.92
PMC1YGL006W YPR010C-AA5Z2X5 72 aa3.02□□□□□ -1.93
PMC1YGL006W YBR230W-AQ3E762 66 aa3.02□□□□□ -1.93
PMC1YGL006W YMR122CQ03879 124 aa3.02□□□□□ -1.93
PMC1YGL006W YNL162W-AQ3E7A8 72 aa3.02□□□□□ -1.93
PMC1YGL006W YNL277W-AQ3E7Z0 62 aa3.02□□□□□ -1.93
PMC1YGL006W YOR376W-AQ3E805 51 aa3.02□□□□□ -1.93
PMC1YGL006W EDC2P40023 145 aaPredicted RBP3.02□□□□□ -1.93
PMC1YGL006W YDR274CP87283 123 aa3.02□□□□□ -1.93
PMC1YGL006W YHR007C-AQ07074 71 aa3.02□□□□□ -1.93
PMC1YGL006W OST5Q92316 86 aa3.02□□□□□ -1.93
PMC1YGL006W YLR162WQ06235 118 aa3.01□□□□□ -1.93
PMC1YGL006W YLR412C-AQ3E742 68 aa3.01□□□□□ -1.93
PMC1YGL006W BSC4P53841 131 aa3□□□□□ -1.93
PMC1YGL006W YPR153WQ06537 140 aa3□□□□□ -1.93
PMC1YGL006W YGR240C-AQ3E786 66 aa3□□□□□ -1.93
PMC1YGL006W Q0297Q9ZZV8 51 aa3□□□□□ -1.93
PMC1YGL006W RPB9P27999 122 aa3□□□□□ -1.93
PMC1YGL006W YBR182C-AQ8TGU6 64 aa3□□□□□ -1.93
PMC1YGL006W RPL29P05747 59 aaPredicted RBP2.99□□□□□ -1.93
PMC1YGL006W COX23P38824 151 aa2.99□□□□□ -1.93
PMC1YGL006W IGD1P43598 195 aa2.99□□□□□ -1.93
PMC1YGL006W YOL166W-AQ8TGJ1 51 aa2.99□□□□□ -1.93
PMC1YGL006W RPC10P40422 70 aa2.99□□□□□ -1.93
PMC1YGL006W GAT4P40569 121 aa2.99□□□□□ -1.93
PMC1YGL006W YBR056W-AI2HB52 66 aa2.98□□□□□ -1.93
PMC1YGL006W SPT4P32914 102 aaPredicted RBP2.98□□□□□ -1.93
PMC1YGL006W PEX22P39718 180 aa2.98□□□□□ -1.93
PMC1YGL006W YGR164WP53291 111 aa2.98□□□□□ -1.93
PMC1YGL006W SGF11Q03067 99 aa2.98□□□□□ -1.93
PMC1YGL006W YLR157W-DP0CE99 70 aa2.98□□□□□ -1.93
PMC1YGL006W YBR144CP34215 104 aa2.98□□□□□ -1.93
PMC1YGL006W DDR2P89113 61 aa2.98□□□□□ -1.93
PMC1YGL006W YGR121W-AQ3E816 71 aa2.98□□□□□ -1.93
PMC1YGL006W YNL042W-BQ3E7Z2 85 aa2.97□□□□□ -1.93
PMC1YGL006W YGL034CP53186 121 aa2.97□□□□□ -1.93
PMC1YGL006W YCR095W-AQ3E787 52 aa2.97□□□□□ -1.93
PMC1YGL006W YDR182W-AQ3E796 67 aa2.97□□□□□ -1.93
PMC1YGL006W YDL241WQ07738 123 aa2.97□□□□□ -1.93
PMC1YGL006W HHF1P02309 103 aaKnown RBP2.96□□□□□ -1.94
PMC1YGL006W YER188C-AP0C0V2 99 aa2.96□□□□□ -1.94
PMC1YGL006W YMR230W-AQ3E7B5 62 aa2.95□□□□□ -1.94
PMC1YGL006W YOR072WQ08486 104 aa2.95□□□□□ -1.94
PMC1YGL006W YGR035W-AQ45U48 73 aa2.95□□□□□ -1.94
PMC1YGL006W YOL013W-AP0C272 63 aaPredicted RBP2.94□□□□□ -1.94
PMC1YGL006W YGL193CP53097 103 aa2.94□□□□□ -1.94
PMC1YGL006W ECM19Q06011 112 aa2.94□□□□□ -1.94
PMC1YGL006W SDH6Q3E785 79 aa2.94□□□□□ -1.94
PMC1YGL006W YCR043CP25361 127 aa2.94□□□□□ -1.94
PMC1YGL006W YAR064WP39563 99 aa2.94□□□□□ -1.94
PMC1YGL006W RDS3Q06835 107 aaPredicted RBP2.93□□□□□ -1.94
PMC1YGL006W RPL33AP05744 107 aaKnown RBP2.93□□□□□ -1.94
PMC1YGL006W RPL33BP41056 107 aaKnown RBP2.93□□□□□ -1.94
PMC1YGL006W YDR115WQ04598 105 aa2.93□□□□□ -1.94
PMC1YGL006W YKL065W-AQ2V2P2 73 aa2.93□□□□□ -1.94
PMC1YGL006W YMR001C-AQ8TGS9 76 aa2.92□□□□□ -1.94
PMC1YGL006W HUB1Q6Q546 73 aa2.92□□□□□ -1.94
PMC1YGL006W YEL045CP32616 141 aa2.91□□□□□ -1.94
PMC1YGL006W RTC6O14464 93 aa2.91□□□□□ -1.94
PMC1YGL006W YGL041C-BQ3E750 60 aa2.91□□□□□ -1.94
PMC1YGL006W YIL156W-BQ2V2P4 73 aa2.9□□□□□ -1.95
PMC1YGL006W YER145C-AA0A023PYF4 145 aa2.89□□□□□ -1.95
PMC1YGL006W AUA1P32450 94 aa2.89□□□□□ -1.95
PMC1YGL006W YHR125WP38831 101 aa2.89□□□□□ -1.95
PMC1YGL006W GIS2P53849 153 aaKnown RBP RIP-Chip data2.89□□□□□ -1.95not detected
PMC1YGL006W YLR307C-AQ3E825 87 aa2.88□□□□□ -1.95
PMC1YGL006W DDR48P18899 430 aaKnown RBP2.88□□□□□ -1.95
PMC1YGL006W YBR027CP38220 110 aa2.86□□□□□ -1.95
PMC1YGL006W YLL066W-BQ8TGJ7 56 aa2.86□□□□□ -1.95
PMC1YGL006W YFR032C-BQ8TGU2 87 aa2.86□□□□□ -1.95
PMC1YGL006W YNL122CP53921 115 aaPredicted RBP2.86□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms