RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W YHR213W-AQ8TGT4 77 aa1.04□□□□□ -2.24
NIC96YFR002W YCR001WP25347 104 aa1.04□□□□□ -2.24
NIC96YFR002W LCL1Q02786 101 aa1.04□□□□□ -2.24
NIC96YFR002W LSM6Q06406 86 aaKnown RBP1.04□□□□□ -2.24
NIC96YFR002W MRPS12P53732 153 aa1.03□□□□□ -2.24
NIC96YFR002W NHP2P32495 156 aaPredicted RBP1.03□□□□□ -2.25
NIC96YFR002W YHR138CP38841 114 aaPredicted RBP1.03□□□□□ -2.25
NIC96YFR002W ICS3P47034 131 aa1.03□□□□□ -2.25
NIC96YFR002W LCL2Q08045 131 aa1.03□□□□□ -2.25
NIC96YFR002W IMP2P46972 177 aa1.02□□□□□ -2.25
NIC96YFR002W SUS1Q6WNK7 96 aa1.02□□□□□ -2.25
NIC96YFR002W YJL009WP47078 108 aa1.01□□□□□ -2.25
NIC96YFR002W YGL041C-BQ3E750 60 aa1.01□□□□□ -2.25
NIC96YFR002W YGR240C-AQ3E786 66 aa1.01□□□□□ -2.25
NIC96YFR002W YMR105W-AQ8TGS8 64 aa1.01□□□□□ -2.25
NIC96YFR002W MRP17P28778 131 aa1.01□□□□□ -2.25
NIC96YFR002W PAU6P0CE90 120 aa1□□□□□ -2.25
NIC96YFR002W PAU18P0CE91 120 aa1□□□□□ -2.25
NIC96YFR002W MRPL38P35996 138 aaPredicted RBP1□□□□□ -2.25
NIC96YFR002W RSM18P40033 138 aa1□□□□□ -2.25
NIC96YFR002W MGR2Q02889 113 aa1□□□□□ -2.25
NIC96YFR002W PAI3P01094 68 aa1□□□□□ -2.25
NIC96YFR002W TIM12P32830 109 aa1□□□□□ -2.25
NIC96YFR002W SSS1P35179 80 aa1□□□□□ -2.25
NIC96YFR002W PDX3P38075 228 aaKnown RBP1□□□□□ -2.25
NIC96YFR002W YDR119W-AQ2V2P9 66 aa1□□□□□ -2.25
NIC96YFR002W HUG1Q6Q5K6 68 aa1□□□□□ -2.25
NIC96YFR002W YPR010C-AA5Z2X5 72 aa0.99□□□□□ -2.25
NIC96YFR002W PAU8P0CE92 120 aa0.99□□□□□ -2.25
NIC96YFR002W PAU11P0CE93 120 aa0.99□□□□□ -2.25
NIC96YFR002W PAU13P38725 120 aa0.99□□□□□ -2.25
NIC96YFR002W HUA1P40325 198 aa0.99□□□□□ -2.25
NIC96YFR002W MVB12P42939 101 aa0.99□□□□□ -2.25
NIC96YFR002W PAU4P53427 120 aa0.99□□□□□ -2.25
NIC96YFR002W PAU10Q03050 120 aa0.99□□□□□ -2.25
NIC96YFR002W YOL118CQ08259 102 aa0.99□□□□□ -2.25
NIC96YFR002W YOL131WQ08270 108 aa0.99□□□□□ -2.25
NIC96YFR002W YOR072WQ08486 104 aa0.99□□□□□ -2.25
NIC96YFR002W PAU9Q3E770 120 aa0.99□□□□□ -2.25
NIC96YFR002W YCR095W-AQ3E787 52 aa0.99□□□□□ -2.25
NIC96YFR002W YIL102CP40488 101 aa0.99□□□□□ -2.25
NIC96YFR002W MRPL31P14063 131 aaPredicted RBP0.98□□□□□ -2.25
NIC96YFR002W HHY1P39982 102 aa0.98□□□□□ -2.25
NIC96YFR002W RPS29BP41058 56 aaKnown RBP0.98□□□□□ -2.25
NIC96YFR002W YLR255CO13574 117 aa0.98□□□□□ -2.25
NIC96YFR002W YBR292CP38357 123 aa0.98□□□□□ -2.25
NIC96YFR002W YHL005CP38752 130 aa0.97□□□□□ -2.25
NIC96YFR002W YDR210WQ03482 75 aa0.97□□□□□ -2.25
NIC96YFR002W PAU20Q08322 120 aa0.97□□□□□ -2.25
NIC96YFR002W YIL134C-AQ45U18 67 aa0.97□□□□□ -2.25
NIC96YFR002W PAU1P0CE88 120 aa0.97□□□□□ -2.25
NIC96YFR002W PAU14P0CE89 120 aa0.97□□□□□ -2.25
NIC96YFR002W RPS11AP0CX47 156 aaKnown RBP0.97□□□□□ -2.25
NIC96YFR002W RPS11BP0CX48 156 aaKnown RBP0.97□□□□□ -2.25
NIC96YFR002W TOM6P33448 61 aa0.97□□□□□ -2.25
NIC96YFR002W YBL071CP38185 102 aa0.97□□□□□ -2.25
NIC96YFR002W ATX1P38636 73 aa0.97□□□□□ -2.25
NIC96YFR002W YHR173CP38864 112 aa0.97□□□□□ -2.25
NIC96YFR002W YNL198CP40166 100 aa0.96□□□□□ -2.26
NIC96YFR002W SNA2P56508 79 aa0.96□□□□□ -2.26
NIC96YFR002W YIL156W-BQ2V2P4 73 aa0.96□□□□□ -2.26
NIC96YFR002W YDR381C-AQ3E6R5 114 aa0.96□□□□□ -2.26
NIC96YFR002W YNR034W-AQ3E841 98 aa0.96□□□□□ -2.26
NIC96YFR002W YMR007WQ03675 126 aa0.96□□□□□ -2.26
NIC96YFR002W PAU23Q07987 124 aa0.95□□□□□ -2.26
NIC96YFR002W PAU17Q12370 124 aa0.95□□□□□ -2.26
NIC96YFR002W YPL038W-AQ3E7B4 63 aa0.95□□□□□ -2.26
NIC96YFR002W SWM2P40342 146 aa0.94□□□□□ -2.26
NIC96YFR002W YDR010CQ12426 110 aa0.94□□□□□ -2.26
NIC96YFR002W YLR307C-AQ3E825 87 aa0.94□□□□□ -2.26
NIC96YFR002W YER188C-AP0C0V2 99 aa0.94□□□□□ -2.26
NIC96YFR002W YOR105WQ08504 108 aa0.93□□□□□ -2.26
NIC96YFR002W YDR034C-AP0C289 58 aa0.93□□□□□ -2.26
NIC96YFR002W YMR141CP40211 102 aa0.93□□□□□ -2.26
NIC96YFR002W YJR128WP47162 119 aa0.93□□□□□ -2.26
NIC96YFR002W ERI1P62651 68 aaKnown RBP0.93□□□□□ -2.26
NIC96YFR002W YHR213W-BQ8TGK1 99 aa0.93□□□□□ -2.26
NIC96YFR002W FPR2P32472 135 aa0.92□□□□□ -2.26
NIC96YFR002W MRX7P53869 86 aa0.92□□□□□ -2.26
NIC96YFR002W COX19Q3E731 98 aa0.92□□□□□ -2.26
NIC96YFR002W YKL018C-AQ3E7A7 99 aa0.92□□□□□ -2.26
NIC96YFR002W YGR121W-AQ3E816 71 aa0.92□□□□□ -2.26
NIC96YFR002W NOP10Q6Q547 58 aaPredicted RBP0.92□□□□□ -2.26
NIC96YFR002W YFL041W-AQ3E817 63 aa0.92□□□□□ -2.26
NIC96YFR002W YDL022C-AP0C5L6 82 aa0.91□□□□□ -2.26
NIC96YFR002W RPL37AP49166 88 aaKnown RBP0.91□□□□□ -2.26
NIC96YFR002W SHU1P38751 150 aa0.91□□□□□ -2.26
NIC96YFR002W YOR034C-AQ3E735 80 aa0.91□□□□□ -2.26
NIC96YFR002W YAL065CO13511 128 aa0.9□□□□□ -2.26
NIC96YFR002W BSC4P53841 131 aa0.9□□□□□ -2.26
NIC96YFR002W YOR314WQ12506 109 aa0.9□□□□□ -2.26
NIC96YFR002W VMA9Q3E7B6 73 aa0.9□□□□□ -2.26
NIC96YFR002W YNL190WP53872 204 aa0.9□□□□□ -2.27
NIC96YFR002W QCR9P22289 66 aa0.89□□□□□ -2.27
NIC96YFR002W AIM19P40502 157 aa0.89□□□□□ -2.27
NIC96YFR002W YOR192C-CQ3E736 78 aa0.88□□□□□ -2.27
NIC96YFR002W YDR246W-AQ3E763 66 aa0.88□□□□□ -2.27
NIC96YFR002W RPL37BP51402 88 aaKnown RBP0.88□□□□□ -2.27
NIC96YFR002W EDC1P53080 175 aaPredicted RBP0.88□□□□□ -2.27
NIC96YFR002W YIL102C-AQ2V2P5 75 aa0.88□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms