RNA–Protein interactions for RNA: YER049W

TPA1, Transcript of Poly(rA)-binding protein, yeastyeast

Gene TPA1, Length 1,935 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPA1YER049W SMD1Q02260 146 aaPredicted RBP2.89□□□□□ -1.95
TPA1YER049W STF1P01098 86 aa2.88□□□□□ -1.95
TPA1YER049W RPL26AP05743 127 aaKnown RBP2.88□□□□□ -1.95
TPA1YER049W AQY2P0CD90 149 aa2.88□□□□□ -1.95
TPA1YER049W RPL26BP53221 127 aaKnown RBP2.88□□□□□ -1.95
TPA1YER049W YKL183C-AQ3E765 70 aa2.88□□□□□ -1.95
TPA1YER049W RPL43AP0CX25 92 aaKnown RBP2.87□□□□□ -1.95
TPA1YER049W RPL43BP0CX26 92 aa2.87□□□□□ -1.95
TPA1YER049W FYV5P25585 152 aa2.87□□□□□ -1.95
TPA1YER049W SFT1P43682 97 aa2.87□□□□□ -1.95
TPA1YER049W ATP20Q12233 115 aa2.87□□□□□ -1.95
TPA1YER049W AIM4P38305 123 aaPredicted RBP2.87□□□□□ -1.95
TPA1YER049W YAL064WP39711 94 aa2.87□□□□□ -1.95
TPA1YER049W RSM18P40033 138 aa2.87□□□□□ -1.95
TPA1YER049W TDA2P40045 126 aa2.87□□□□□ -1.95
TPA1YER049W RPL38P49167 78 aaKnown RBP2.87□□□□□ -1.95
TPA1YER049W SGF11Q03067 99 aa2.87□□□□□ -1.95
TPA1YER049W YDR115WQ04598 105 aa2.87□□□□□ -1.95
TPA1YER049W YBR230W-AQ3E762 66 aa2.87□□□□□ -1.95
TPA1YER049W YLR307C-AQ3E825 87 aa2.87□□□□□ -1.95
TPA1YER049W MEC1P38111 2368 aa2.87□□□□□ -1.95
TPA1YER049W IGD1P43598 195 aa2.86□□□□□ -1.95
TPA1YER049W SBH1P52870 82 aa2.86□□□□□ -1.95
TPA1YER049W YRA2P36036 203 aaKnown RBP RIP-Chip data2.85□□□□□ -1.95not detected
TPA1YER049W COX23P38824 151 aa2.85□□□□□ -1.95
TPA1YER049W ICS3P47034 131 aa2.85□□□□□ -1.95
TPA1YER049W YLL066W-BQ8TGJ7 56 aa2.85□□□□□ -1.95
TPA1YER049W SPC1P46965 94 aa2.85□□□□□ -1.95
TPA1YER049W YOR314WQ12506 109 aa2.85□□□□□ -1.95
TPA1YER049W YJL127C-BQ3E828 52 aa2.85□□□□□ -1.95
TPA1YER049W YGR035W-AQ45U48 73 aa2.85□□□□□ -1.95
TPA1YER049W YOL014WQ08110 124 aa2.84□□□□□ -1.95
TPA1YER049W YDR182W-AQ3E796 67 aa2.84□□□□□ -1.95
TPA1YER049W YMR230W-AQ3E7B5 62 aa2.84□□□□□ -1.95
TPA1YER049W NOP10Q6Q547 58 aaPredicted RBP2.84□□□□□ -1.95
TPA1YER049W EDC2P40023 145 aaPredicted RBP2.83□□□□□ -1.96
TPA1YER049W YNL042W-BQ3E7Z2 85 aa2.83□□□□□ -1.96
TPA1YER049W BET1P22804 142 aa2.82□□□□□ -1.96
TPA1YER049W KTI11Q3E840 82 aa2.82□□□□□ -1.96
TPA1YER049W YOL166W-AQ8TGJ1 51 aa2.82□□□□□ -1.96
TPA1YER049W YHR213W-BQ8TGK1 99 aa2.82□□□□□ -1.96
TPA1YER049W RPL36BO14455 100 aaKnown RBP2.81□□□□□ -1.96
TPA1YER049W RPL36AP05745 100 aaPredicted RBP2.81□□□□□ -1.96
TPA1YER049W YER078W-AQ3E7A2 54 aa2.81□□□□□ -1.96
TPA1YER049W RTC6O14464 93 aa2.81□□□□□ -1.96
TPA1YER049W TDA8Q6B2U8 126 aa2.81□□□□□ -1.96
TPA1YER049W RPS28BP0C0X0 67 aaKnown RBP2.8□□□□□ -1.96
TPA1YER049W YGR164WP53291 111 aa2.8□□□□□ -1.96
TPA1YER049W YJL133C-AQ3E7A3 74 aa2.8□□□□□ -1.96
TPA1YER049W RPS28AQ3E7X9 67 aaPredicted RBP2.8□□□□□ -1.96
TPA1YER049W SPT4P32914 102 aaPredicted RBP2.8□□□□□ -1.96
TPA1YER049W RRT15Q3E811 62 aa2.8□□□□□ -1.96
TPA1YER049W KSH1Q8TGJ3 72 aa2.8□□□□□ -1.96
TPA1YER049W YBR121C-AP0C5L4 52 aa2.79□□□□□ -1.96
TPA1YER049W ECM19Q06011 112 aa2.79□□□□□ -1.96
TPA1YER049W YLR412C-AQ3E742 68 aa2.79□□□□□ -1.96
TPA1YER049W Q0032Q9ZZX7 96 aa2.79□□□□□ -1.96
TPA1YER049W YEL045CP32616 141 aa2.78□□□□□ -1.96
TPA1YER049W YFL067WP43537 175 aa2.78□□□□□ -1.96
TPA1YER049W YLR162WQ06235 118 aa2.78□□□□□ -1.96
TPA1YER049W YGL041C-BQ3E750 60 aa2.78□□□□□ -1.97
TPA1YER049W YAR023CD6VPM8 179 aa2.77□□□□□ -1.97
TPA1YER049W YGL193CP53097 103 aa2.77□□□□□ -1.97
TPA1YER049W YHL005CP38752 130 aa2.76□□□□□ -1.97
TPA1YER049W GIS2P53849 153 aaKnown RBP RIP-Chip data2.76□□□□□ -1.97not detected
TPA1YER049W SNA2P56508 79 aa2.76□□□□□ -1.97
TPA1YER049W YGR121W-AQ3E816 71 aa2.76□□□□□ -1.97
TPA1YER049W YOR072WQ08486 104 aa2.76□□□□□ -1.97
TPA1YER049W MIC10Q96VH5 97 aa2.76□□□□□ -1.97
TPA1YER049W UTP20P35194 2493 aaKnown RBP2.75□□□□□ -1.97
TPA1YER049W BSC4P53841 131 aa2.75□□□□□ -1.97
TPA1YER049W DDR2P89113 61 aa2.75□□□□□ -1.97
TPA1YER049W LIP1Q03579 150 aa2.75□□□□□ -1.97
TPA1YER049W YHR007C-AQ07074 71 aa2.75□□□□□ -1.97
TPA1YER049W YOL013W-AP0C272 63 aaPredicted RBP2.74□□□□□ -1.97
TPA1YER049W YJL197C-AP0C5P0 93 aa2.74□□□□□ -1.97
TPA1YER049W RPS30AP0CX33 63 aaKnown RBP2.74□□□□□ -1.97
TPA1YER049W RPS30BP0CX34 63 aaKnown RBP2.74□□□□□ -1.97
TPA1YER049W TOR1P35169 2470 aa2.74□□□□□ -1.97
TPA1YER049W AUA1P32450 94 aa2.74□□□□□ -1.97
TPA1YER049W PEX22P39718 180 aa2.74□□□□□ -1.97
TPA1YER049W YCL042WP25572 119 aa2.72□□□□□ -1.97
TPA1YER049W YIL102CP40488 101 aa2.72□□□□□ -1.97
TPA1YER049W YJR085CP47131 105 aaKnown RBP2.72□□□□□ -1.97
TPA1YER049W YKL065W-AQ2V2P2 73 aa2.72□□□□□ -1.97
TPA1YER049W HHF1P02309 103 aaKnown RBP2.72□□□□□ -1.97
TPA1YER049W YAR064WP39563 99 aa2.71□□□□□ -1.98
TPA1YER049W YOR268CQ08734 132 aa2.7□□□□□ -1.98
TPA1YER049W YOR381W-AQ3E804 55 aa2.7□□□□□ -1.98
TPA1YER049W YMR122CQ03879 124 aa2.69□□□□□ -1.98
TPA1YER049W YHR125WP38831 101 aa2.68□□□□□ -1.98
TPA1YER049W NUM1Q00402 2748 aa2.67□□□□□ -1.98
TPA1YER049W YNL277W-AQ3E7Z0 62 aa2.67□□□□□ -1.98
TPA1YER049W YER188C-AP0C0V2 99 aa2.66□□□□□ -1.98
TPA1YER049W SPG1P50088 95 aa2.66□□□□□ -1.98
TPA1YER049W YPR153WQ06537 140 aa2.66□□□□□ -1.98
TPA1YER049W SDH6Q3E785 79 aa2.66□□□□□ -1.98
TPA1YER049W HUB1Q6Q546 73 aa2.66□□□□□ -1.98
TPA1YER049W YDR034C-AP0C289 58 aa2.65□□□□□ -1.99
TPA1YER049W CUP1-1P0CX80 61 aa2.65□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms