RNA–Protein interactions for RNA: YDR407C

TRS120, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TRS120, Length 3,870 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS120YDR407C YGR121W-AQ3E816 71 aa2.38□□□□□ -2.03
TRS120YDR407C YGR035W-AQ45U48 73 aa2.38□□□□□ -2.03
TRS120YDR407C YLR281CQ05863 155 aa2.38□□□□□ -2.03
TRS120YDR407C YLR156WP0CE96 114 aa2.37□□□□□ -2.03
TRS120YDR407C YLR159WP0CE97 114 aa2.37□□□□□ -2.03
TRS120YDR407C YLR161WP0CE98 114 aa2.37□□□□□ -2.03
TRS120YDR407C SPC1P46965 94 aa2.37□□□□□ -2.03
TRS120YDR407C YER039C-AP0CD97 72 aa2.36□□□□□ -2.03
TRS120YDR407C YCR001WP25347 104 aa2.36□□□□□ -2.03
TRS120YDR407C EDC2P40023 145 aaPredicted RBP2.36□□□□□ -2.03
TRS120YDR407C PBA1Q05778 276 aa2.36□□□□□ -2.03
TRS120YDR407C AQY2P0CD90 149 aa2.36□□□□□ -2.03
TRS120YDR407C RTC6O14464 93 aa2.36□□□□□ -2.03
TRS120YDR407C ICS3P47034 131 aa2.35□□□□□ -2.03
TRS120YDR407C SPT4P32914 102 aaPredicted RBP2.35□□□□□ -2.03
TRS120YDR407C YAL064WP39711 94 aa2.35□□□□□ -2.03
TRS120YDR407C EMC6Q12431 108 aa2.35□□□□□ -2.03
TRS120YDR407C YER187WP40102 141 aa2.34□□□□□ -2.03
TRS120YDR407C YLR361C-AQ3E795 98 aa2.34□□□□□ -2.03
TRS120YDR407C YLR415CO13578 112 aa2.34□□□□□ -2.03
TRS120YDR407C RPL36BO14455 100 aaKnown RBP2.34□□□□□ -2.03
TRS120YDR407C RPL36AP05745 100 aaPredicted RBP2.34□□□□□ -2.03
TRS120YDR407C YLR412C-AQ3E742 68 aa2.34□□□□□ -2.03
TRS120YDR407C YCR050CP25630 102 aa2.34□□□□□ -2.04
TRS120YDR407C SAP30P38429 201 aa2.34□□□□□ -2.04
TRS120YDR407C YJL127C-BQ3E828 52 aa2.34□□□□□ -2.04
TRS120YDR407C RSM18P40033 138 aa2.33□□□□□ -2.04
TRS120YDR407C ATP20Q12233 115 aa2.33□□□□□ -2.04
TRS120YDR407C YBL112CQ3E7Y4 105 aa2.33□□□□□ -2.04
TRS120YDR407C DIF1O13577 133 aa2.33□□□□□ -2.04
TRS120YDR407C YOR304C-AO14468 76 aa2.33□□□□□ -2.04
TRS120YDR407C YAR1P46683 200 aa2.32□□□□□ -2.04
TRS120YDR407C NOP10Q6Q547 58 aaPredicted RBP2.32□□□□□ -2.04
TRS120YDR407C YHR213W-BQ8TGK1 99 aa2.32□□□□□ -2.04
TRS120YDR407C MIC10Q96VH5 97 aa2.32□□□□□ -2.04
TRS120YDR407C RPL26AP05743 127 aaKnown RBP2.32□□□□□ -2.04
TRS120YDR407C RPL26BP53221 127 aaKnown RBP2.32□□□□□ -2.04
TRS120YDR407C RPS28BP0C0X0 67 aaKnown RBP2.31□□□□□ -2.04
TRS120YDR407C RPS28AQ3E7X9 67 aaPredicted RBP2.31□□□□□ -2.04
TRS120YDR407C YRA2P36036 203 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
TRS120YDR407C COF1Q03048 143 aaKnown RBP2.3□□□□□ -2.04
TRS120YDR407C YKL183C-AQ3E765 70 aa2.3□□□□□ -2.04
TRS120YDR407C YDL012CQ12489 107 aa2.3□□□□□ -2.04
TRS120YDR407C YLR285C-AQ3E771 56 aa2.3□□□□□ -2.04
TRS120YDR407C DDR2P89113 61 aa2.3□□□□□ -2.04
TRS120YDR407C YJR085CP47131 105 aaKnown RBP2.29□□□□□ -2.04
TRS120YDR407C YJL133C-AQ3E7A3 74 aa2.29□□□□□ -2.04
TRS120YDR407C PEX22P39718 180 aa2.29□□□□□ -2.04
TRS120YDR407C SBH1P52870 82 aa2.28□□□□□ -2.04
TRS120YDR407C YOR314WQ12506 109 aa2.28□□□□□ -2.04
TRS120YDR407C AIM4P38305 123 aaPredicted RBP2.28□□□□□ -2.04
TRS120YDR407C TOR2P32600 2474 aaKnown RBP2.28□□□□□ -2.04
TRS120YDR407C SMD1Q02260 146 aaPredicted RBP2.28□□□□□ -2.04
TRS120YDR407C YDR029WQ12111 104 aa2.28□□□□□ -2.04
TRS120YDR407C RRT15Q3E811 62 aa2.28□□□□□ -2.04
TRS120YDR407C YOL013W-AP0C272 63 aaPredicted RBP2.27□□□□□ -2.05
TRS120YDR407C SPG1P50088 95 aa2.27□□□□□ -2.05
TRS120YDR407C YGR039WP53225 103 aa2.27□□□□□ -2.05
TRS120YDR407C KSH1Q8TGJ3 72 aa2.27□□□□□ -2.05
TRS120YDR407C MMS2P53152 137 aa2.27□□□□□ -2.05
TRS120YDR407C BSC4P53841 131 aa2.26□□□□□ -2.05
TRS120YDR407C RPL11AP0C0W9 174 aaKnown RBP2.26□□□□□ -2.05
TRS120YDR407C YHR073W-AP0C5N7 58 aa2.26□□□□□ -2.05
TRS120YDR407C YOR072WQ08486 104 aa2.26□□□□□ -2.05
TRS120YDR407C RPL11BQ3E757 174 aaPredicted RBP2.26□□□□□ -2.05
TRS120YDR407C YGL041C-BQ3E750 60 aa2.26□□□□□ -2.05
TRS120YDR407C TSC3Q3E790 80 aa2.25□□□□□ -2.05
TRS120YDR407C BET1P22804 142 aa2.24□□□□□ -2.05
TRS120YDR407C YLR255CO13574 117 aa2.24□□□□□ -2.05
TRS120YDR407C TDA2P40045 126 aa2.24□□□□□ -2.05
TRS120YDR407C YOL097W-AQ3E7Y9 61 aa2.23□□□□□ -2.05
TRS120YDR407C YKL065W-AQ2V2P2 73 aa2.23□□□□□ -2.05
TRS120YDR407C KTI11Q3E840 82 aa2.23□□□□□ -2.05
TRS120YDR407C YBR182C-AQ8TGU6 64 aa2.22□□□□□ -2.05
TRS120YDR407C YHR125WP38831 101 aa2.22□□□□□ -2.05
TRS120YDR407C PRP8P33334 2413 aaKnown RBP2.22□□□□□ -2.05
TRS120YDR407C LIP1Q03579 150 aa2.21□□□□□ -2.06
TRS120YDR407C YHR007C-AQ07074 71 aa2.21□□□□□ -2.06
TRS120YDR407C YAR064WP39563 99 aa2.2□□□□□ -2.06
TRS120YDR407C YMR230W-AQ3E7B5 62 aa2.2□□□□□ -2.06
TRS120YDR407C YAR023CD6VPM8 179 aa2.2□□□□□ -2.06
TRS120YDR407C YHL005CP38752 130 aa2.2□□□□□ -2.06
TRS120YDR407C MRP10O75012 95 aa2.19□□□□□ -2.06
TRS120YDR407C YCL042WP25572 119 aa2.19□□□□□ -2.06
TRS120YDR407C Q0032Q9ZZX7 96 aa2.19□□□□□ -2.06
TRS120YDR407C YBR121C-AP0C5L4 52 aa2.19□□□□□ -2.06
TRS120YDR407C YLR122CQ12312 125 aa2.19□□□□□ -2.06
TRS120YDR407C RPS30AP0CX33 63 aaKnown RBP2.18□□□□□ -2.06
TRS120YDR407C RPS30BP0CX34 63 aaKnown RBP2.18□□□□□ -2.06
TRS120YDR407C YPR153WQ06537 140 aa2.18□□□□□ -2.06
TRS120YDR407C YBR027CP38220 110 aa2.17□□□□□ -2.06
TRS120YDR407C SNA2P56508 79 aa2.17□□□□□ -2.06
TRS120YDR407C RPL38P49167 78 aaKnown RBP2.16□□□□□ -2.06
TRS120YDR407C YPR195CQ06594 109 aa2.16□□□□□ -2.06
TRS120YDR407C YER188C-AP0C0V2 99 aa2.15□□□□□ -2.06
TRS120YDR407C YBL008W-AQ3E821 79 aa2.14□□□□□ -2.07
TRS120YDR407C YDR034C-AP0C289 58 aa2.14□□□□□ -2.07
TRS120YDR407C YMR122CQ03879 124 aa2.14□□□□□ -2.07
TRS120YDR407C LCL2Q08045 131 aa2.14□□□□□ -2.07
TRS120YDR407C YBR016WP38216 128 aa2.13□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms