RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W YIL086CP40503 102 aa0.67□□□□□ -2.3
MSN5YDR335W YBL071CP38185 102 aa0.67□□□□□ -2.3
MSN5YDR335W MPC2P38857 129 aa0.67□□□□□ -2.3
MSN5YDR335W YIL046W-AQ3E7Z4 54 aa0.67□□□□□ -2.3
MSN5YDR335W MRPL31P14063 131 aaPredicted RBP0.66□□□□□ -2.3
MSN5YDR335W HUA1P40325 198 aa0.66□□□□□ -2.3
MSN5YDR335W NHP2P32495 156 aaPredicted RBP0.66□□□□□ -2.3
MSN5YDR335W PDX3P38075 228 aaKnown RBP0.66□□□□□ -2.3
MSN5YDR335W YCR001WP25347 104 aa0.65□□□□□ -2.31
MSN5YDR335W QCR9P22289 66 aa0.65□□□□□ -2.31
MSN5YDR335W RPS22BQ3E7Y3 130 aaKnown RBP0.65□□□□□ -2.31
MSN5YDR335W YOL131WQ08270 108 aa0.65□□□□□ -2.31
MSN5YDR335W YPR145C-AQ2V2P0 78 aa0.65□□□□□ -2.31
MSN5YDR335W YKL023C-AQ2V2P3 75 aa0.65□□□□□ -2.31
MSN5YDR335W VMA9Q3E7B6 73 aa0.65□□□□□ -2.31
MSN5YDR335W HMRA2P0CY13 119 aa0.64□□□□□ -2.31
MSN5YDR335W YIL102CP40488 101 aa0.64□□□□□ -2.31
MSN5YDR335W SNA2P56508 79 aa0.64□□□□□ -2.31
MSN5YDR335W YIL156W-BQ2V2P4 73 aa0.64□□□□□ -2.31
MSN5YDR335W YDR182W-AQ3E796 67 aa0.64□□□□□ -2.31
MSN5YDR335W PAU6P0CE90 120 aa0.64□□□□□ -2.31
MSN5YDR335W PAU18P0CE91 120 aa0.64□□□□□ -2.31
MSN5YDR335W YHR173CP38864 112 aa0.64□□□□□ -2.31
MSN5YDR335W LCL1Q02786 101 aa0.64□□□□□ -2.31
MSN5YDR335W YNR034W-AQ3E841 98 aa0.64□□□□□ -2.31
MSN5YDR335W SPC1P46965 94 aa0.63□□□□□ -2.31
MSN5YDR335W YOR105WQ08504 108 aa0.63□□□□□ -2.31
MSN5YDR335W MHF2Q3E829 80 aa0.63□□□□□ -2.31
MSN5YDR335W ATX1P38636 73 aa0.63□□□□□ -2.31
MSN5YDR335W YIL102C-AQ2V2P5 75 aa0.63□□□□□ -2.31
MSN5YDR335W NOP10Q6Q547 58 aaPredicted RBP0.63□□□□□ -2.31
MSN5YDR335W YDL022C-AP0C5L6 82 aa0.63□□□□□ -2.31
MSN5YDR335W SSS1P35179 80 aa0.62□□□□□ -2.31
MSN5YDR335W LSM2P38203 95 aaKnown RBP0.62□□□□□ -2.31
MSN5YDR335W YMR122W-AQ3E842 84 aa0.62□□□□□ -2.31
MSN5YDR335W PAU8P0CE92 120 aa0.62□□□□□ -2.31
MSN5YDR335W PAU11P0CE93 120 aa0.62□□□□□ -2.31
MSN5YDR335W PAU13P38725 120 aa0.62□□□□□ -2.31
MSN5YDR335W YJR128WP47162 119 aa0.62□□□□□ -2.31
MSN5YDR335W PAU4P53427 120 aa0.62□□□□□ -2.31
MSN5YDR335W ERI1P62651 68 aaKnown RBP0.62□□□□□ -2.31
MSN5YDR335W PAU10Q03050 120 aa0.62□□□□□ -2.31
MSN5YDR335W PAU9Q3E770 120 aa0.62□□□□□ -2.31
MSN5YDR335W YNL042W-BQ3E7Z2 85 aa0.62□□□□□ -2.31
MSN5YDR335W SHU1P38751 150 aa0.61□□□□□ -2.31
MSN5YDR335W TOM1Q03280 3268 aa0.61□□□□□ -2.31
MSN5YDR335W AQY2P0CD90 149 aa0.61□□□□□ -2.31
MSN5YDR335W ATP17Q06405 101 aa0.61□□□□□ -2.31
MSN5YDR335W YDR010CQ12426 110 aa0.61□□□□□ -2.31
MSN5YDR335W CDC39P25655 2108 aaKnown RBP0.61□□□□□ -2.31
MSN5YDR335W YOL097W-AQ3E7Y9 61 aa0.6□□□□□ -2.31
MSN5YDR335W HUG1Q6Q5K6 68 aa0.6□□□□□ -2.31
MSN5YDR335W YOL166W-AQ8TGJ1 51 aa0.6□□□□□ -2.31
MSN5YDR335W YOL013W-AP0C272 63 aaPredicted RBP0.6□□□□□ -2.31
MSN5YDR335W TIM12P32830 109 aa0.6□□□□□ -2.31
MSN5YDR335W PAU1P0CE88 120 aa0.6□□□□□ -2.31
MSN5YDR335W PAU14P0CE89 120 aa0.6□□□□□ -2.31
MSN5YDR335W SEC16P48415 2195 aaKnown RBP0.59□□□□□ -2.31
MSN5YDR335W YMR007WQ03675 126 aa0.59□□□□□ -2.32
MSN5YDR335W YSY6P38374 65 aa0.58□□□□□ -2.32
MSN5YDR335W YIL134C-AQ45U18 67 aa0.58□□□□□ -2.32
MSN5YDR335W EDC1P53080 175 aaPredicted RBP0.58□□□□□ -2.32
MSN5YDR335W COX7P10174 60 aa0.58□□□□□ -2.32
MSN5YDR335W RPL37AP49166 88 aaKnown RBP0.58□□□□□ -2.32
MSN5YDR335W ACC1Q00955 2233 aaKnown RBP0.57□□□□□ -2.32
MSN5YDR335W GCN1P33892 2672 aaKnown RBP0.57□□□□□ -2.32
MSN5YDR335W IRA1P18963 3092 aa0.57□□□□□ -2.32
MSN5YDR335W PAU7P39545 55 aa0.57□□□□□ -2.32
MSN5YDR335W YOR034C-AQ3E735 80 aa0.57□□□□□ -2.32
MSN5YDR335W YHR213W-BQ8TGK1 99 aa0.57□□□□□ -2.32
MSN5YDR335W PAU20Q08322 120 aa0.56□□□□□ -2.32
MSN5YDR335W YBR072C-AQ3E794 53 aa0.56□□□□□ -2.32
MSN5YDR335W TRA1P38811 3744 aa0.56□□□□□ -2.32
MSN5YDR335W YNL190WP53872 204 aa0.56□□□□□ -2.32
MSN5YDR335W ATP18P81450 59 aa0.56□□□□□ -2.32
MSN5YDR335W HHY1P39982 102 aa0.56□□□□□ -2.32
MSN5YDR335W YMR141CP40211 102 aa0.56□□□□□ -2.32
MSN5YDR335W FPR2P32472 135 aa0.55□□□□□ -2.32
MSN5YDR335W YOR011W-AQ3E807 68 aa0.55□□□□□ -2.32
MSN5YDR335W YOR032W-AQ8TGS1 66 aa0.54□□□□□ -2.32
MSN5YDR335W YBR032WP38223 100 aa0.54□□□□□ -2.32
MSN5YDR335W YBR201C-AQ2V2Q3 67 aa0.54□□□□□ -2.32
MSN5YDR335W Q0032Q9ZZX7 96 aa0.54□□□□□ -2.32
MSN5YDR335W RPL37BP51402 88 aaKnown RBP0.53□□□□□ -2.32
MSN5YDR335W HUB1Q6Q546 73 aa0.53□□□□□ -2.32
MSN5YDR335W BRR2P32639 2163 aaKnown RBP0.53□□□□□ -2.32
MSN5YDR335W MVB12P42939 101 aa0.52□□□□□ -2.33
MSN5YDR335W RPS30AP0CX33 63 aaKnown RBP0.52□□□□□ -2.33
MSN5YDR335W RPS30BP0CX34 63 aaKnown RBP0.52□□□□□ -2.33
MSN5YDR335W RPL38P49167 78 aaKnown RBP0.52□□□□□ -2.33
MSN5YDR335W YGR025WP53216 100 aa0.52□□□□□ -2.33
MSN5YDR335W YBR200W-AQ3E755 54 aa0.52□□□□□ -2.33
MSN5YDR335W AUA1P32450 94 aa0.52□□□□□ -2.33
MSN5YDR335W RPS27AP35997 82 aaKnown RBP0.52□□□□□ -2.33
MSN5YDR335W POL2P21951 2222 aaKnown RBP0.51□□□□□ -2.33
MSN5YDR335W YBR016WP38216 128 aa0.51□□□□□ -2.33
MSN5YDR335W BLM10P43583 2143 aa0.51□□□□□ -2.33
MSN5YDR335W FMP27Q06179 2628 aa0.5□□□□□ -2.33
MSN5YDR335W YJR107C-AP0CT86 78 aa0.5□□□□□ -2.33
MSN5YDR335W SDH6Q3E785 79 aa0.5□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms