RNA–Protein interactions for RNA: YDR243C

PRP28, Transcript of RNA helicase in the DEAD-box family, yeastyeast

Gene PRP28, Length 1,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP28YDR243C MRX7P53869 86 aa3.22□□□□□ -1.89
PRP28YDR243C YDR010CQ12426 110 aa3.22□□□□□ -1.89
PRP28YDR243C YNL042W-BQ3E7Z2 85 aa3.22□□□□□ -1.89
PRP28YDR243C YAR023CD6VPM8 179 aa3.21□□□□□ -1.9
PRP28YDR243C YGL149WP53116 101 aa3.21□□□□□ -1.9
PRP28YDR243C MRPS8Q03799 155 aa3.21□□□□□ -1.9
PRP28YDR243C BEM2P39960 2167 aaKnown RBP3.21□□□□□ -1.9
PRP28YDR243C YEL008WP40001 126 aa3.2□□□□□ -1.9
PRP28YDR243C POR2P40478 281 aa3.2□□□□□ -1.9
PRP28YDR243C YJL197C-AP0C5P0 93 aa3.2□□□□□ -1.9
PRP28YDR243C COX23P38824 151 aa3.2□□□□□ -1.9
PRP28YDR243C YPR010C-AA5Z2X5 72 aa3.18□□□□□ -1.9
PRP28YDR243C YCR001WP25347 104 aa3.18□□□□□ -1.9
PRP28YDR243C BSC4P53841 131 aa3.18□□□□□ -1.9
PRP28YDR243C YBR200W-AQ3E755 54 aa3.18□□□□□ -1.9
PRP28YDR243C ACC1Q00955 2233 aaKnown RBP3.18□□□□□ -1.9
PRP28YDR243C YBR219CP38317 127 aa3.17□□□□□ -1.9
PRP28YDR243C YDR114CQ04597 100 aa3.17□□□□□ -1.9
PRP28YDR243C RPS27AP35997 82 aaKnown RBP3.17□□□□□ -1.9
PRP28YDR243C RPS27BP38711 82 aa3.17□□□□□ -1.9
PRP28YDR243C COX14P39103 70 aa3.17□□□□□ -1.9
PRP28YDR243C YIL102CP40488 101 aa3.17□□□□□ -1.9
PRP28YDR243C SNA2P56508 79 aa3.17□□□□□ -1.9
PRP28YDR243C SEC16P48415 2195 aaKnown RBP3.16□□□□□ -1.9
PRP28YDR243C RTC6O14464 93 aa3.16□□□□□ -1.9
PRP28YDR243C YPR013CQ12145 317 aa3.16□□□□□ -1.9
PRP28YDR243C AQY2P0CD90 149 aa3.15□□□□□ -1.9
PRP28YDR243C ATP17Q06405 101 aa3.15□□□□□ -1.9
PRP28YDR243C YLL006W-AQ3E814 58 aa3.15□□□□□ -1.9
PRP28YDR243C YMR001C-AQ8TGS9 76 aa3.15□□□□□ -1.9
PRP28YDR243C YLR157W-DP0CE99 70 aa3.15□□□□□ -1.91
PRP28YDR243C YDL241WQ07738 123 aa3.15□□□□□ -1.91
PRP28YDR243C YMR122W-AQ3E842 84 aa3.15□□□□□ -1.91
PRP28YDR243C YER175W-AQ8TGU4 54 aa3.15□□□□□ -1.91
PRP28YDR243C YOL013W-AP0C272 63 aaPredicted RBP3.14□□□□□ -1.91
PRP28YDR243C SIP18P50263 79 aa3.14□□□□□ -1.91
PRP28YDR243C YPL278CQ08990 100 aa3.14□□□□□ -1.91
PRP28YDR243C SDH6Q3E785 79 aa3.14□□□□□ -1.91
PRP28YDR243C POL2P21951 2222 aaKnown RBP3.13□□□□□ -1.91
PRP28YDR243C CCW12Q12127 133 aa3.13□□□□□ -1.91
PRP28YDR243C YOL085CQ99345 113 aa3.13□□□□□ -1.91
PRP28YDR243C FAB1P34756 2278 aa3.13□□□□□ -1.91
PRP28YDR243C YGR025WP53216 100 aa3.12□□□□□ -1.91
PRP28YDR243C YBR027CP38220 110 aa3.1□□□□□ -1.91
PRP28YDR243C YHR125WP38831 101 aa3.1□□□□□ -1.91
PRP28YDR243C IGD1P43598 195 aa3.1□□□□□ -1.91
PRP28YDR243C YNL122CP53921 115 aaPredicted RBP3.1□□□□□ -1.91
PRP28YDR243C LCL2Q08045 131 aa3.1□□□□□ -1.91
PRP28YDR243C VAM10Q08474 114 aa3.1□□□□□ -1.91
PRP28YDR243C YHR213W-BQ8TGK1 99 aa3.1□□□□□ -1.91
PRP28YDR243C YER084WP40057 128 aa3.09□□□□□ -1.91
PRP28YDR243C YCL048W-AQ2V2Q2 79 aa3.08□□□□□ -1.92
PRP28YDR243C YNL162W-AQ3E7A8 72 aa3.08□□□□□ -1.92
PRP28YDR243C YMR105W-AQ8TGS8 64 aa3.08□□□□□ -1.92
PRP28YDR243C RPL29P05747 59 aaPredicted RBP3.07□□□□□ -1.92
PRP28YDR243C YCR041WP37265 110 aa3.07□□□□□ -1.92
PRP28YDR243C ECM19Q06011 112 aa3.07□□□□□ -1.92
PRP28YDR243C FPR1P20081 114 aaKnown RBP3.06□□□□□ -1.92
PRP28YDR243C YGL014C-AP0C5N1 53 aa3.05□□□□□ -1.92
PRP28YDR243C YJL133C-AQ3E7A3 74 aa3.05□□□□□ -1.92
PRP28YDR243C AUA1P32450 94 aa3.04□□□□□ -1.92
PRP28YDR243C YIL086CP40503 102 aa3.02□□□□□ -1.93
PRP28YDR243C PMP3P87284 55 aa3.02□□□□□ -1.93
PRP28YDR243C SGF11Q03067 99 aa3.02□□□□□ -1.93
PRP28YDR243C YER078W-AQ3E7A2 54 aa3.02□□□□□ -1.93
PRP28YDR243C Q0032Q9ZZX7 96 aa3.02□□□□□ -1.93
PRP28YDR243C RPL39P04650 51 aa3.01□□□□□ -1.93
PRP28YDR243C YNL146C-AQ3E7Z1 64 aa3.01□□□□□ -1.93
PRP28YDR243C YIL046W-AQ3E7Z4 54 aa3.01□□□□□ -1.93
PRP28YDR243C YLR307C-AQ3E825 87 aa3.01□□□□□ -1.93
PRP28YDR243C MVB12P42939 101 aa3□□□□□ -1.93
PRP28YDR243C YDR210WQ03482 75 aa3□□□□□ -1.93
PRP28YDR243C YDL012CQ12489 107 aa2.99□□□□□ -1.93
PRP28YDR243C YBR230W-AQ3E762 66 aa2.99□□□□□ -1.93
PRP28YDR243C YJL127C-BQ3E828 52 aa2.99□□□□□ -1.93
PRP28YDR243C YAR064WP39563 99 aa2.98□□□□□ -1.93
PRP28YDR243C CMC4Q3E7A9 73 aa2.98□□□□□ -1.93
PRP28YDR243C YOR011W-AQ3E807 68 aa2.98□□□□□ -1.93
PRP28YDR243C YBL039W-BP0C268 59 aa2.97□□□□□ -1.93
PRP28YDR243C YEL014CP39999 101 aa2.96□□□□□ -1.94
PRP28YDR243C YOL097W-AQ3E7Y9 61 aa2.95□□□□□ -1.94
PRP28YDR243C YDR524C-BQ3E6R4 66 aa2.95□□□□□ -1.94
PRP28YDR243C COX8P04039 78 aa2.94□□□□□ -1.94
PRP28YDR243C DDR2P89113 61 aa2.94□□□□□ -1.94
PRP28YDR243C URA2P07259 2214 aaKnown RBP2.93□□□□□ -1.94
PRP28YDR243C YBR201C-AQ2V2Q3 67 aa2.92□□□□□ -1.94
PRP28YDR243C YCL042WP25572 119 aa2.9□□□□□ -1.94
PRP28YDR243C YDR115WQ04598 105 aa2.9□□□□□ -1.94
PRP28YDR243C HOR7Q05827 59 aa2.9□□□□□ -1.94
PRP28YDR243C RPC10P40422 70 aa2.89□□□□□ -1.95
PRP28YDR243C YPR195CQ06594 109 aa2.89□□□□□ -1.95
PRP28YDR243C YHR032W-AP0C5N6 59 aa2.89□□□□□ -1.95
PRP28YDR243C IRA2P19158 3079 aa2.88□□□□□ -1.95
PRP28YDR243C YGL041C-BQ3E750 60 aa2.87□□□□□ -1.95
PRP28YDR243C YHR007C-AQ07074 71 aa2.87□□□□□ -1.95
PRP28YDR243C RDS3Q06835 107 aaPredicted RBP2.86□□□□□ -1.95
PRP28YDR243C YOR072WQ08486 104 aa2.86□□□□□ -1.95
PRP28YDR243C YLR255CO13574 117 aa2.84□□□□□ -1.96
PRP28YDR243C YGR146C-AQ8TGT9 53 aa2.83□□□□□ -1.96
PRP28YDR243C RPL43AP0CX25 92 aaKnown RBP2.82□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms