RNA–Protein interactions for RNA: YDR108W

TRS85, Transcript of Component of transport protein particle (TRAPP) complex III, yeastyeast

Gene TRS85, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS85YDR108W YER084WP40057 128 aa3.02□□□□□ -1.93
TRS85YDR108W POR2P40478 281 aa3.02□□□□□ -1.93
TRS85YDR108W WWM1P43582 211 aaKnown RBP3.02□□□□□ -1.93
TRS85YDR108W SIP18P50263 79 aa3.02□□□□□ -1.93
TRS85YDR108W YOL014WQ08110 124 aa3.02□□□□□ -1.93
TRS85YDR108W HUB1Q6Q546 73 aa3.02□□□□□ -1.93
TRS85YDR108W SEC16P48415 2195 aaKnown RBP3.01□□□□□ -1.93
TRS85YDR108W ACC1Q00955 2233 aaKnown RBP3.01□□□□□ -1.93
TRS85YDR108W BPH1P25356 2167 aa3.01□□□□□ -1.93
TRS85YDR108W YPR013CQ12145 317 aa3.01□□□□□ -1.93
TRS85YDR108W YDR010CQ12426 110 aa3.01□□□□□ -1.93
TRS85YDR108W YNL042W-BQ3E7Z2 85 aa3.01□□□□□ -1.93
TRS85YDR108W FAS1P07149 2051 aaKnown RBP3.01□□□□□ -1.93
TRS85YDR108W YPR010C-AA5Z2X5 72 aa3□□□□□ -1.93
TRS85YDR108W SOM1Q05676 74 aa3□□□□□ -1.93
TRS85YDR108W FYV12Q08559 129 aa3□□□□□ -1.93
TRS85YDR108W YMR122W-AQ3E842 84 aa2.99□□□□□ -1.93
TRS85YDR108W YMR105W-AQ8TGS8 64 aa2.99□□□□□ -1.93
TRS85YDR108W MRX7P53869 86 aa2.99□□□□□ -1.93
TRS85YDR108W POL2P21951 2222 aaKnown RBP2.98□□□□□ -1.93
TRS85YDR108W YCR041WP37265 110 aa2.98□□□□□ -1.93
TRS85YDR108W YLR157W-DP0CE99 70 aa2.97□□□□□ -1.93
TRS85YDR108W FPR1P20081 114 aaKnown RBP2.97□□□□□ -1.93
TRS85YDR108W YBR219CP38317 127 aa2.97□□□□□ -1.93
TRS85YDR108W YIL086CP40503 102 aa2.97□□□□□ -1.93
TRS85YDR108W MRPS8Q03799 155 aa2.97□□□□□ -1.93
TRS85YDR108W YMR001C-AQ8TGS9 76 aa2.97□□□□□ -1.93
TRS85YDR108W COX23P38824 151 aa2.97□□□□□ -1.93
TRS85YDR108W YGL149WP53116 101 aa2.97□□□□□ -1.93
TRS85YDR108W VAM10Q08474 114 aa2.97□□□□□ -1.93
TRS85YDR108W SEN1Q00416 2231 aaKnown RBP2.96□□□□□ -1.93
TRS85YDR108W RPL39P04650 51 aa2.96□□□□□ -1.94
TRS85YDR108W AQY2P0CD90 149 aa2.96□□□□□ -1.94
TRS85YDR108W BSC4P53841 131 aa2.96□□□□□ -1.94
TRS85YDR108W SNA2P56508 79 aa2.96□□□□□ -1.94
TRS85YDR108W CCW12Q12127 133 aa2.96□□□□□ -1.94
TRS85YDR108W YDR524C-BQ3E6R4 66 aa2.96□□□□□ -1.94
TRS85YDR108W SDH6Q3E785 79 aa2.96□□□□□ -1.94
TRS85YDR108W YAR023CD6VPM8 179 aa2.96□□□□□ -1.94
TRS85YDR108W YOL013W-AP0C272 63 aaPredicted RBP2.96□□□□□ -1.94
TRS85YDR108W YCR001WP25347 104 aa2.96□□□□□ -1.94
TRS85YDR108W EDC2P40023 145 aaPredicted RBP2.96□□□□□ -1.94
TRS85YDR108W YIL046W-AQ3E7Z4 54 aa2.95□□□□□ -1.94
TRS85YDR108W ATP17Q06405 101 aa2.94□□□□□ -1.94
TRS85YDR108W TMC1Q08422 150 aaPredicted RBP2.94□□□□□ -1.94
TRS85YDR108W YHR213W-BQ8TGK1 99 aa2.94□□□□□ -1.94
TRS85YDR108W BRR2P32639 2163 aaKnown RBP2.93□□□□□ -1.94
TRS85YDR108W YJL197C-AP0C5P0 93 aa2.92□□□□□ -1.94
TRS85YDR108W PMP3P87284 55 aa2.92□□□□□ -1.94
TRS85YDR108W YBR027CP38220 110 aa2.92□□□□□ -1.94
TRS85YDR108W YHR125WP38831 101 aa2.92□□□□□ -1.94
TRS85YDR108W YPL278CQ08990 100 aa2.92□□□□□ -1.94
TRS85YDR108W YJL133C-AQ3E7A3 74 aa2.92□□□□□ -1.94
TRS85YDR108W YBL008W-AQ3E821 79 aa2.92□□□□□ -1.94
TRS85YDR108W FAB1P34756 2278 aa2.92□□□□□ -1.94
TRS85YDR108W RPL29P05747 59 aaPredicted RBP2.91□□□□□ -1.94
TRS85YDR108W LCL2Q08045 131 aa2.91□□□□□ -1.94
TRS85YDR108W YOR011W-AQ3E807 68 aa2.91□□□□□ -1.94
TRS85YDR108W RTC6O14464 93 aa2.91□□□□□ -1.94
TRS85YDR108W YNL122CP53921 115 aaPredicted RBP2.9□□□□□ -1.95
TRS85YDR108W ECM19Q06011 112 aa2.89□□□□□ -1.95
TRS85YDR108W YDL241WQ07738 123 aa2.89□□□□□ -1.95
TRS85YDR108W YNL146C-AQ3E7Z1 64 aa2.89□□□□□ -1.95
TRS85YDR108W YNL162W-AQ3E7A8 72 aa2.89□□□□□ -1.95
TRS85YDR108W MVB12P42939 101 aa2.88□□□□□ -1.95
TRS85YDR108W AUA1P32450 94 aa2.87□□□□□ -1.95
TRS85YDR108W IGD1P43598 195 aa2.86□□□□□ -1.95
TRS85YDR108W YJL127C-BQ3E828 52 aa2.86□□□□□ -1.95
TRS85YDR108W YBR230W-AQ3E762 66 aa2.86□□□□□ -1.95
TRS85YDR108W Q0032Q9ZZX7 96 aa2.86□□□□□ -1.95
TRS85YDR108W YGL014C-AP0C5N1 53 aa2.85□□□□□ -1.95
TRS85YDR108W SGF11Q03067 99 aa2.85□□□□□ -1.95
TRS85YDR108W YAR064WP39563 99 aa2.84□□□□□ -1.95
TRS85YDR108W YCL048W-AQ2V2Q2 79 aa2.83□□□□□ -1.96
TRS85YDR108W YBL039W-BP0C268 59 aa2.82□□□□□ -1.96
TRS85YDR108W YLR307C-AQ3E825 87 aa2.82□□□□□ -1.96
TRS85YDR108W IRA2P19158 3079 aa2.8□□□□□ -1.96
TRS85YDR108W DDR2P89113 61 aa2.8□□□□□ -1.96
TRS85YDR108W YDL012CQ12489 107 aa2.78□□□□□ -1.96
TRS85YDR108W HOR7Q05827 59 aa2.78□□□□□ -1.96
TRS85YDR108W TOM1Q03280 3268 aa2.77□□□□□ -1.97
TRS85YDR108W RPC10P40422 70 aa2.77□□□□□ -1.97
TRS85YDR108W YER078W-AQ3E7A2 54 aa2.77□□□□□ -1.97
TRS85YDR108W YHR007C-AQ07074 71 aa2.77□□□□□ -1.97
TRS85YDR108W YDR210WQ03482 75 aa2.76□□□□□ -1.97
TRS85YDR108W YPR117WQ06116 2489 aa2.75□□□□□ -1.97
TRS85YDR108W YJR085CP47131 105 aaKnown RBP2.75□□□□□ -1.97
TRS85YDR108W YOR072WQ08486 104 aa2.75□□□□□ -1.97
TRS85YDR108W CMC4Q3E7A9 73 aa2.75□□□□□ -1.97
TRS85YDR108W TAR1Q8TGM6 124 aa2.74□□□□□ -1.97
TRS85YDR108W COX8P04039 78 aa2.73□□□□□ -1.97
TRS85YDR108W YBR201C-AQ2V2Q3 67 aa2.73□□□□□ -1.97
TRS85YDR108W YOL097W-AQ3E7Y9 61 aa2.73□□□□□ -1.97
TRS85YDR108W RDS3Q06835 107 aaPredicted RBP2.72□□□□□ -1.97
TRS85YDR108W YGR240C-AQ3E786 66 aa2.72□□□□□ -1.97
TRS85YDR108W YEL014CP39999 101 aa2.72□□□□□ -1.97
TRS85YDR108W VPS13Q07878 3144 aa2.72□□□□□ -1.97
TRS85YDR108W YCL042WP25572 119 aa2.71□□□□□ -1.98
TRS85YDR108W GIS2P53849 153 aaKnown RBP RIP-Chip data2.7□□□□□ -1.98not detected
TRS85YDR108W URA2P07259 2214 aaKnown RBP2.7□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms