RNA–Protein interactions for RNA: YDR077W

SED1, Transcript of Major stress-induced structural GPI-cell wall glycoprotein, yeastyeast

Gene SED1, Length 1,017 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED1YDR077W YLR161WP0CE98 114 aa6.32□□□□□ -1.4
SED1YDR077W GAT4P40569 121 aa6.32□□□□□ -1.4
SED1YDR077W LCL1Q02786 101 aa6.31□□□□□ -1.4
SED1YDR077W YDR381C-AQ3E6R5 114 aa6.31□□□□□ -1.4
SED1YDR077W SKI6P46948 246 aaPredicted RBP6.3□□□□□ -1.4
SED1YDR077W YAR1P46683 200 aa6.29□□□□□ -1.4
SED1YDR077W YFR009W-AP0C5M9 85 aa6.28□□□□□ -1.4
SED1YDR077W BSC4P53841 131 aa6.28□□□□□ -1.4
SED1YDR077W KRE1P17260 313 aa6.26□□□□□ -1.41
SED1YDR077W YOR072WQ08486 104 aa6.26□□□□□ -1.41
SED1YDR077W RPL36BO14455 100 aaKnown RBP6.25□□□□□ -1.41
SED1YDR077W MMS2P53152 137 aa6.25□□□□□ -1.41
SED1YDR077W RSM19P53733 91 aaPredicted RBP6.25□□□□□ -1.41
SED1YDR077W YHR007C-AQ07074 71 aa6.25□□□□□ -1.41
SED1YDR077W YHR139C-AO13536 103 aa6.24□□□□□ -1.41
SED1YDR077W GIS2P53849 153 aaKnown RBP RIP-Chip data6.24□□□□□ -1.41not detected
SED1YDR077W YAL063C-AQ3E791 96 aa6.23□□□□□ -1.41
SED1YDR077W ISD11Q6Q560 94 aa6.23□□□□□ -1.41
SED1YDR077W YLR415CO13578 112 aa6.22□□□□□ -1.41
SED1YDR077W YGR121W-AQ3E816 71 aa6.22□□□□□ -1.41
SED1YDR077W EDC2P40023 145 aaPredicted RBP6.21□□□□□ -1.42
SED1YDR077W RAD6P06104 172 aa6.2□□□□□ -1.42
SED1YDR077W SPG1P50088 95 aa6.2□□□□□ -1.42
SED1YDR077W EMC6Q12431 108 aa6.2□□□□□ -1.42
SED1YDR077W TDA2P40045 126 aa6.19□□□□□ -1.42
SED1YDR077W YFL065CP43539 102 aa6.19□□□□□ -1.42
SED1YDR077W YPR203WQ08994 102 aa6.19□□□□□ -1.42
SED1YDR077W YBL112CQ3E7Y4 105 aa6.19□□□□□ -1.42
SED1YDR077W YFL041W-AQ3E817 63 aa6.19□□□□□ -1.42
SED1YDR077W ICS3P47034 131 aa6.18□□□□□ -1.42
SED1YDR077W RPL38P49167 78 aaKnown RBP6.18□□□□□ -1.42
SED1YDR077W YHR213W-BQ8TGK1 99 aa6.18□□□□□ -1.42
SED1YDR077W EDC1P53080 175 aaPredicted RBP6.17□□□□□ -1.42
SED1YDR077W YJR085CP47131 105 aaKnown RBP6.16□□□□□ -1.42
SED1YDR077W YJL133C-AQ3E7A3 74 aa6.16□□□□□ -1.42
SED1YDR077W TDA8Q6B2U8 126 aa6.16□□□□□ -1.42
SED1YDR077W COX23P38824 151 aa6.15□□□□□ -1.42
SED1YDR077W RPP2AP05319 106 aaKnown RBP6.14□□□□□ -1.43
SED1YDR077W SHH4Q06236 168 aa6.14□□□□□ -1.43
SED1YDR077W YHL042WP38729 150 aa6.13□□□□□ -1.43
SED1YDR077W RSM18P40033 138 aa6.13□□□□□ -1.43
SED1YDR077W YNL184CP53876 108 aa6.13□□□□□ -1.43
SED1YDR077W YMR230W-AQ3E7B5 62 aa6.13□□□□□ -1.43
SED1YDR077W ECM19Q06011 112 aa6.11□□□□□ -1.43
SED1YDR077W YOR268CQ08734 132 aa6.11□□□□□ -1.43
SED1YDR077W YSY6P38374 65 aa6.1□□□□□ -1.43
SED1YDR077W YLR285C-AQ3E771 56 aa6.09□□□□□ -1.43
SED1YDR077W YIL002W-AQ3E7Z5 69 aa6.09□□□□□ -1.43
SED1YDR077W MDN1Q12019 4910 aaKnown RBP6.09□□□□□ -1.44
SED1YDR077W YGL149WP53116 101 aa6.08□□□□□ -1.44
SED1YDR077W YLR162WQ06235 118 aa6.08□□□□□ -1.44
SED1YDR077W ATP20Q12233 115 aa6.08□□□□□ -1.44
SED1YDR077W DDR48P18899 430 aaKnown RBP6.07□□□□□ -1.44
SED1YDR077W YBR027CP38220 110 aa6.07□□□□□ -1.44
SED1YDR077W COF1Q03048 143 aaKnown RBP6.07□□□□□ -1.44
SED1YDR077W YOL014WQ08110 124 aa6.07□□□□□ -1.44
SED1YDR077W MIC10Q96VH5 97 aa6.06□□□□□ -1.44
SED1YDR077W YJL197C-AP0C5P0 93 aa6.05□□□□□ -1.44
SED1YDR077W YBR182C-AQ8TGU6 64 aa6.05□□□□□ -1.44
SED1YDR077W YEL045CP32616 141 aa6.03□□□□□ -1.44
SED1YDR077W YLR157W-DP0CE99 70 aa6.02□□□□□ -1.45
SED1YDR077W YCR050CP25630 102 aa6.01□□□□□ -1.45
SED1YDR077W YOR304C-AO14468 76 aa6□□□□□ -1.45
SED1YDR077W YGR039WP53225 103 aa6□□□□□ -1.45
SED1YDR077W YKL183C-AQ3E765 70 aa5.99□□□□□ -1.45
SED1YDR077W YOL097W-AQ3E7Y9 61 aa5.98□□□□□ -1.45
SED1YDR077W YHL018WP38744 120 aaPredicted RBP5.96□□□□□ -1.46
SED1YDR077W YFL067WP43537 175 aa5.96□□□□□ -1.46
SED1YDR077W YDR119W-AQ2V2P9 66 aa5.96□□□□□ -1.46
SED1YDR077W HOT13P36078 116 aa5.93□□□□□ -1.46
SED1YDR077W YPL038W-AQ3E7B4 63 aa5.93□□□□□ -1.46
SED1YDR077W YCR043CP25361 127 aa5.92□□□□□ -1.46
SED1YDR077W KSH1Q8TGJ3 72 aa5.92□□□□□ -1.46
SED1YDR077W YOR314WQ12506 109 aa5.91□□□□□ -1.46
SED1YDR077W KTI11Q3E840 82 aa5.91□□□□□ -1.46
SED1YDR077W YAR064WP39563 99 aa5.9□□□□□ -1.46
SED1YDR077W YDR010CQ12426 110 aa5.89□□□□□ -1.47
SED1YDR077W RPL36AP05745 100 aaPredicted RBP5.86□□□□□ -1.47
SED1YDR077W YHL005CP38752 130 aa5.84□□□□□ -1.47
SED1YDR077W YIL102CP40488 101 aa5.81□□□□□ -1.48
SED1YDR077W YPL080CQ02826 108 aa5.81□□□□□ -1.48
SED1YDR077W NOP10Q6Q547 58 aaPredicted RBP5.81□□□□□ -1.48
SED1YDR077W TOM6P33448 61 aa5.79□□□□□ -1.48
SED1YDR077W YDL012CQ12489 107 aa5.79□□□□□ -1.48
SED1YDR077W YPR153WQ06537 140 aa5.78□□□□□ -1.48
SED1YDR077W YDR246W-AQ3E763 66 aa5.78□□□□□ -1.48
SED1YDR077W AIM4P38305 123 aaPredicted RBP5.77□□□□□ -1.49
SED1YDR077W LIP1Q03579 150 aa5.77□□□□□ -1.49
SED1YDR077W YHR073W-AP0C5N7 58 aa5.76□□□□□ -1.49
SED1YDR077W YKL069WP36088 180 aa5.76□□□□□ -1.49
SED1YDR077W YER187WP40102 141 aa5.76□□□□□ -1.49
SED1YDR077W COX7P10174 60 aa5.75□□□□□ -1.49
SED1YDR077W YOL013W-AP0C272 63 aaPredicted RBP5.72□□□□□ -1.49
SED1YDR077W YLR361C-AQ3E795 98 aa5.72□□□□□ -1.49
SED1YDR077W YDR182W-AQ3E796 67 aa5.7□□□□□ -1.5
SED1YDR077W YOL166W-AQ8TGJ1 51 aa5.7□□□□□ -1.5
SED1YDR077W HHF1P02309 103 aaKnown RBP5.66□□□□□ -1.5
SED1YDR077W YNL122CP53921 115 aaPredicted RBP5.63□□□□□ -1.51
SED1YDR077W YOR316C-AQ3E806 69 aa5.63□□□□□ -1.51
SED1YDR077W YHR125WP38831 101 aa5.59□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms