RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeastyeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRP1YDR007W RPS30BP0CX34 63 aaKnown RBP3.96□□□□□ -1.78
TRP1YDR007W YAL064WP39711 94 aa3.96□□□□□ -1.78
TRP1YDR007W YOR034C-AQ3E735 80 aa3.96□□□□□ -1.78
TRP1YDR007W FAB1P34756 2278 aa3.95□□□□□ -1.78
TRP1YDR007W YHR032W-AP0C5N6 59 aa3.95□□□□□ -1.78
TRP1YDR007W YPR153WQ06537 140 aa3.95□□□□□ -1.78
TRP1YDR007W YOL160WQ08321 113 aa3.95□□□□□ -1.78
TRP1YDR007W HUB1Q6Q546 73 aa3.95□□□□□ -1.78
TRP1YDR007W FYV5P25585 152 aa3.94□□□□□ -1.78
TRP1YDR007W YEL008WP40001 126 aa3.94□□□□□ -1.78
TRP1YDR007W YBR200W-AQ3E755 54 aa3.94□□□□□ -1.78
TRP1YDR007W BEM2P39960 2167 aaKnown RBP3.94□□□□□ -1.78
TRP1YDR007W BLM10P43583 2143 aa3.94□□□□□ -1.78
TRP1YDR007W DDR48P18899 430 aaKnown RBP3.93□□□□□ -1.78
TRP1YDR007W YER135CP40082 130 aa3.93□□□□□ -1.78
TRP1YDR007W POR2P40478 281 aa3.93□□□□□ -1.78
TRP1YDR007W YIL086CP40503 102 aa3.92□□□□□ -1.78
TRP1YDR007W YPR117WQ06116 2489 aa3.92□□□□□ -1.78
TRP1YDR007W YFR009W-AP0C5M9 85 aa3.91□□□□□ -1.78
TRP1YDR007W YLL006W-AQ3E814 58 aa3.91□□□□□ -1.78
TRP1YDR007W YOR032W-AQ8TGS1 66 aa3.91□□□□□ -1.78
TRP1YDR007W FAS1P07149 2051 aaKnown RBP3.91□□□□□ -1.78
TRP1YDR007W MRPL38P35996 138 aaPredicted RBP3.9□□□□□ -1.79
TRP1YDR007W CCW12Q12127 133 aa3.9□□□□□ -1.79
TRP1YDR007W YCR095W-AQ3E787 52 aa3.9□□□□□ -1.79
TRP1YDR007W YJL144WP47009 104 aa3.89□□□□□ -1.79
TRP1YDR007W SIP18P50263 79 aa3.89□□□□□ -1.79
TRP1YDR007W YDR034W-BQ6Q5X2 51 aa3.89□□□□□ -1.79
TRP1YDR007W YIL102CP40488 101 aa3.88□□□□□ -1.79
TRP1YDR007W QCR10P37299 77 aa3.87□□□□□ -1.79
TRP1YDR007W SPC1P46965 94 aa3.87□□□□□ -1.79
TRP1YDR007W LIP1Q03579 150 aa3.87□□□□□ -1.79
TRP1YDR007W RDS3Q06835 107 aaPredicted RBP3.87□□□□□ -1.79
TRP1YDR007W YFR032C-BQ8TGU2 87 aa3.87□□□□□ -1.79
TRP1YDR007W SEC16P48415 2195 aaKnown RBP3.86□□□□□ -1.79
TRP1YDR007W COX23P38824 151 aa3.86□□□□□ -1.79
TRP1YDR007W VAM10Q08474 114 aa3.86□□□□□ -1.79
TRP1YDR007W YMR105W-AQ8TGS8 64 aa3.86□□□□□ -1.79
TRP1YDR007W POL2P21951 2222 aaKnown RBP3.86□□□□□ -1.79
TRP1YDR007W YPR010C-AA5Z2X5 72 aa3.85□□□□□ -1.79
TRP1YDR007W PMP3P87284 55 aa3.85□□□□□ -1.79
TRP1YDR007W ACC1Q00955 2233 aaKnown RBP3.85□□□□□ -1.79
TRP1YDR007W RPL29P05747 59 aaPredicted RBP3.84□□□□□ -1.79
TRP1YDR007W SDH6Q3E785 79 aa3.84□□□□□ -1.79
TRP1YDR007W YMR122W-AQ3E842 84 aa3.83□□□□□ -1.8
TRP1YDR007W RPS11AP0CX47 156 aaKnown RBP3.82□□□□□ -1.8
TRP1YDR007W RPS11BP0CX48 156 aaKnown RBP3.82□□□□□ -1.8
TRP1YDR007W YNL146C-AQ3E7Z1 64 aa3.82□□□□□ -1.8
TRP1YDR007W RPL39P04650 51 aa3.81□□□□□ -1.8
TRP1YDR007W YLR157W-DP0CE99 70 aa3.81□□□□□ -1.8
TRP1YDR007W YCR001WP25347 104 aa3.81□□□□□ -1.8
TRP1YDR007W YBR219CP38317 127 aa3.81□□□□□ -1.8
TRP1YDR007W YGL149WP53116 101 aa3.81□□□□□ -1.8
TRP1YDR007W SNA2P56508 79 aa3.81□□□□□ -1.8
TRP1YDR007W YMR001C-AQ8TGS9 76 aa3.81□□□□□ -1.8
TRP1YDR007W BSC4P53841 131 aa3.8□□□□□ -1.8
TRP1YDR007W MRX7P53869 86 aa3.8□□□□□ -1.8
TRP1YDR007W MRPS8Q03799 155 aa3.8□□□□□ -1.8
TRP1YDR007W ATP17Q06405 101 aa3.8□□□□□ -1.8
TRP1YDR007W YDR010CQ12426 110 aa3.8□□□□□ -1.8
TRP1YDR007W YNL042W-BQ3E7Z2 85 aa3.8□□□□□ -1.8
TRP1YDR007W YIL046W-AQ3E7Z4 54 aa3.8□□□□□ -1.8
TRP1YDR007W SOM1Q05676 74 aa3.79□□□□□ -1.8
TRP1YDR007W YOL014WQ08110 124 aa3.79□□□□□ -1.8
TRP1YDR007W YIL156W-BQ2V2P4 73 aa3.79□□□□□ -1.8
TRP1YDR007W YHR213W-BQ8TGK1 99 aa3.79□□□□□ -1.8
TRP1YDR007W BRR2P32639 2163 aaKnown RBP3.79□□□□□ -1.8
TRP1YDR007W SEN1Q00416 2231 aaKnown RBP3.78□□□□□ -1.8
TRP1YDR007W YOL013W-AP0C272 63 aaPredicted RBP3.78□□□□□ -1.8
TRP1YDR007W YDL241WQ07738 123 aa3.78□□□□□ -1.8
TRP1YDR007W YPR013CQ12145 317 aa3.78□□□□□ -1.8
TRP1YDR007W YAR023CD6VPM8 179 aa3.77□□□□□ -1.81
TRP1YDR007W YGR025WP53216 100 aa3.77□□□□□ -1.81
TRP1YDR007W AQY2P0CD90 149 aa3.76□□□□□ -1.81
TRP1YDR007W YJL133C-AQ3E7A3 74 aa3.76□□□□□ -1.81
TRP1YDR007W YBR027CP38220 110 aa3.75□□□□□ -1.81
TRP1YDR007W MVB12P42939 101 aa3.75□□□□□ -1.81
TRP1YDR007W YOR011W-AQ3E807 68 aa3.75□□□□□ -1.81
TRP1YDR007W YLR307C-AQ3E825 87 aa3.74□□□□□ -1.81
TRP1YDR007W YJL197C-AP0C5P0 93 aa3.73□□□□□ -1.81
TRP1YDR007W YBL039W-BP0C268 59 aa3.72□□□□□ -1.81
TRP1YDR007W YNL122CP53921 115 aaPredicted RBP3.72□□□□□ -1.81
TRP1YDR007W HOR7Q05827 59 aa3.72□□□□□ -1.81
TRP1YDR007W YBR230W-AQ3E762 66 aa3.72□□□□□ -1.81
TRP1YDR007W YJL127C-BQ3E828 52 aa3.72□□□□□ -1.81
TRP1YDR007W CSF1Q12150 2958 aa3.72□□□□□ -1.81
TRP1YDR007W RPL33BP41056 107 aaKnown RBP3.71□□□□□ -1.82
TRP1YDR007W TOR2P32600 2474 aaKnown RBP3.7□□□□□ -1.82
TRP1YDR007W YCL048W-AQ2V2Q2 79 aa3.69□□□□□ -1.82
TRP1YDR007W BPH1P25356 2167 aa3.68□□□□□ -1.82
TRP1YDR007W FYV12Q08559 129 aa3.68□□□□□ -1.82
TRP1YDR007W FMP27Q06179 2628 aa3.67□□□□□ -1.82
TRP1YDR007W DDR2P89113 61 aa3.67□□□□□ -1.82
TRP1YDR007W AUA1P32450 94 aa3.66□□□□□ -1.82
TRP1YDR007W YAR064WP39563 99 aa3.66□□□□□ -1.82
TRP1YDR007W RTC6O14464 93 aa3.65□□□□□ -1.83
TRP1YDR007W RPC10P40422 70 aa3.65□□□□□ -1.83
TRP1YDR007W SGF11Q03067 99 aa3.65□□□□□ -1.83
TRP1YDR007W LCL2Q08045 131 aa3.65□□□□□ -1.83
TRP1YDR007W YGR240C-AQ3E786 66 aa3.64□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms