RNA–Protein interactions for RNA: YDL220C

CDC13, Transcript of Single stranded DNA-binding protein found at TG1-3 telomere G-tails, yeastyeast

Gene CDC13, Length 2,775 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC13YDL220C YBR200W-AQ3E755 54 aa5.17□□□□□ -1.58
CDC13YDL220C YKR073CP36153 106 aa5.16□□□□□ -1.58
CDC13YDL220C YOL014WQ08110 124 aa5.16□□□□□ -1.58
CDC13YDL220C YFR032C-BQ8TGU2 87 aa5.16□□□□□ -1.58
CDC13YDL220C LEE1Q02799 301 aaKnown RBP5.16□□□□□ -1.58
CDC13YDL220C YCR095W-AQ3E787 52 aa5.16□□□□□ -1.58
CDC13YDL220C QCR10P37299 77 aa5.15□□□□□ -1.58
CDC13YDL220C MRPL38P35996 138 aaPredicted RBP5.15□□□□□ -1.59
CDC13YDL220C TOR1P35169 2470 aa5.14□□□□□ -1.59
CDC13YDL220C YER084WP40057 128 aa5.14□□□□□ -1.59
CDC13YDL220C SIP18P50263 79 aa5.14□□□□□ -1.59
CDC13YDL220C FYV12Q08559 129 aa5.13□□□□□ -1.59
CDC13YDL220C YLL006W-AQ3E814 58 aa5.13□□□□□ -1.59
CDC13YDL220C RPS11AP0CX47 156 aaKnown RBP5.12□□□□□ -1.59
CDC13YDL220C RPS11BP0CX48 156 aaKnown RBP5.12□□□□□ -1.59
CDC13YDL220C YMR105W-AQ8TGS8 64 aa5.12□□□□□ -1.59
CDC13YDL220C YKL097CP34245 136 aa5.11□□□□□ -1.59
CDC13YDL220C YNL042W-BQ3E7Z2 85 aa5.11□□□□□ -1.59
CDC13YDL220C NUM1Q00402 2748 aa5.11□□□□□ -1.59
CDC13YDL220C YIL086CP40503 102 aa5.1□□□□□ -1.59
CDC13YDL220C YPR010C-AA5Z2X5 72 aa5.1□□□□□ -1.59
CDC13YDL220C COX14P39103 70 aa5.09□□□□□ -1.59
CDC13YDL220C YMR122W-AQ3E842 84 aa5.09□□□□□ -1.59
CDC13YDL220C RPL39P04650 51 aa5.09□□□□□ -1.6
CDC13YDL220C CCW12Q12127 133 aa5.09□□□□□ -1.6
CDC13YDL220C YIL046W-AQ3E7Z4 54 aa5.08□□□□□ -1.6
CDC13YDL220C WWM1P43582 211 aaKnown RBP5.07□□□□□ -1.6
CDC13YDL220C SOM1Q05676 74 aa5.07□□□□□ -1.6
CDC13YDL220C YDR034W-BQ6Q5X2 51 aa5.07□□□□□ -1.6
CDC13YDL220C YBR219CP38317 127 aa5.06□□□□□ -1.6
CDC13YDL220C MRPL39P36533 70 aa5.06□□□□□ -1.6
CDC13YDL220C MRPS8Q03799 155 aa5.05□□□□□ -1.6
CDC13YDL220C COX23P38824 151 aa5.05□□□□□ -1.6
CDC13YDL220C TOR2P32600 2474 aaKnown RBP5.04□□□□□ -1.6
CDC13YDL220C YLR157W-DP0CE99 70 aa5.04□□□□□ -1.6
CDC13YDL220C YBR182C-AQ8TGU6 64 aa5.04□□□□□ -1.6
CDC13YDL220C AQY2P0CD90 149 aa5.03□□□□□ -1.6
CDC13YDL220C YCR043CP25361 127 aa5.03□□□□□ -1.6
CDC13YDL220C YPL278CQ08990 100 aa5.03□□□□□ -1.6
CDC13YDL220C VAM10Q08474 114 aa5.03□□□□□ -1.6
CDC13YDL220C HUB1Q6Q546 73 aa5.03□□□□□ -1.6
CDC13YDL220C URA2P07259 2214 aaKnown RBP5.02□□□□□ -1.61
CDC13YDL220C ECM19Q06011 112 aa5.02□□□□□ -1.61
CDC13YDL220C MRX7P53869 86 aa5.02□□□□□ -1.61
CDC13YDL220C YMR001C-AQ8TGS9 76 aa5.02□□□□□ -1.61
CDC13YDL220C YOL013W-AP0C272 63 aaPredicted RBP5.01□□□□□ -1.61
CDC13YDL220C YAR023CD6VPM8 179 aa5□□□□□ -1.61
CDC13YDL220C YOR011W-AQ3E807 68 aa5□□□□□ -1.61
CDC13YDL220C YHR213W-BQ8TGK1 99 aa5□□□□□ -1.61
CDC13YDL220C SNA2P56508 79 aa4.99□□□□□ -1.61
CDC13YDL220C LCL2Q08045 131 aa4.99□□□□□ -1.61
CDC13YDL220C YGL149WP53116 101 aa4.98□□□□□ -1.61
CDC13YDL220C SDH6Q3E785 79 aa4.98□□□□□ -1.61
CDC13YDL220C BSC4P53841 131 aa4.98□□□□□ -1.61
CDC13YDL220C EDC2P40023 145 aaPredicted RBP4.97□□□□□ -1.61
CDC13YDL220C YCR001WP25347 104 aa4.95□□□□□ -1.62
CDC13YDL220C YJL133C-AQ3E7A3 74 aa4.95□□□□□ -1.62
CDC13YDL220C YDL241WQ07738 123 aa4.94□□□□□ -1.62
CDC13YDL220C YHR125WP38831 101 aa4.93□□□□□ -1.62
CDC13YDL220C ATP17Q06405 101 aa4.93□□□□□ -1.62
CDC13YDL220C RTC6O14464 93 aa4.92□□□□□ -1.62
CDC13YDL220C PMP3P87284 55 aa4.92□□□□□ -1.62
CDC13YDL220C YBR027CP38220 110 aa4.91□□□□□ -1.62
CDC13YDL220C YNL122CP53921 115 aaPredicted RBP4.91□□□□□ -1.62
CDC13YDL220C CUP1-1P0CX80 61 aa4.91□□□□□ -1.62
CDC13YDL220C CUP1-2P0CX81 61 aa4.91□□□□□ -1.62
CDC13YDL220C HFA1P32874 2273 aa4.9□□□□□ -1.62
CDC13YDL220C YNL162W-AQ3E7A8 72 aa4.89□□□□□ -1.63
CDC13YDL220C YJL197C-AP0C5P0 93 aa4.88□□□□□ -1.63
CDC13YDL220C Q0032Q9ZZX7 96 aa4.88□□□□□ -1.63
CDC13YDL220C TEL1P38110 2787 aa4.88□□□□□ -1.63
CDC13YDL220C AUA1P32450 94 aa4.87□□□□□ -1.63
CDC13YDL220C MVB12P42939 101 aa4.87□□□□□ -1.63
CDC13YDL220C YBL008W-AQ3E821 79 aa4.87□□□□□ -1.63
CDC13YDL220C YNL146C-AQ3E7Z1 64 aa4.87□□□□□ -1.63
CDC13YDL220C RPL29P05747 59 aaPredicted RBP4.87□□□□□ -1.63
CDC13YDL220C IGD1P43598 195 aa4.87□□□□□ -1.63
CDC13YDL220C IRA1P18963 3092 aa4.86□□□□□ -1.63
CDC13YDL220C YCL048W-AQ2V2Q2 79 aa4.86□□□□□ -1.63
CDC13YDL220C YJL127C-BQ3E828 52 aa4.85□□□□□ -1.63
CDC13YDL220C MRP10O75012 95 aa4.84□□□□□ -1.63
CDC13YDL220C SGF11Q03067 99 aa4.84□□□□□ -1.63
CDC13YDL220C YBR230W-AQ3E762 66 aa4.83□□□□□ -1.64
CDC13YDL220C TMC1Q08422 150 aaPredicted RBP4.82□□□□□ -1.64
CDC13YDL220C CSF1Q12150 2958 aa4.82□□□□□ -1.64
CDC13YDL220C YGL014C-AP0C5N1 53 aa4.82□□□□□ -1.64
CDC13YDL220C YAR064WP39563 99 aa4.81□□□□□ -1.64
CDC13YDL220C GCN1P33892 2672 aaKnown RBP4.75□□□□□ -1.65
CDC13YDL220C YER078W-AQ3E7A2 54 aa4.73□□□□□ -1.65
CDC13YDL220C YBL039W-BP0C268 59 aa4.73□□□□□ -1.65
CDC13YDL220C YHR007C-AQ07074 71 aa4.72□□□□□ -1.65
CDC13YDL220C CMC4Q3E7A9 73 aa4.71□□□□□ -1.66
CDC13YDL220C YDL012CQ12489 107 aa4.7□□□□□ -1.66
CDC13YDL220C TAR1Q8TGM6 124 aa4.7□□□□□ -1.66
CDC13YDL220C FMP27Q06179 2628 aa4.69□□□□□ -1.66
CDC13YDL220C TRA1P38811 3744 aa4.69□□□□□ -1.66
CDC13YDL220C YDR210WQ03482 75 aa4.68□□□□□ -1.66
CDC13YDL220C YER175W-AQ8TGU4 54 aa4.68□□□□□ -1.66
CDC13YDL220C DDR2P89113 61 aa4.67□□□□□ -1.66
CDC13YDL220C YLR307C-AQ3E825 87 aa4.67□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms