RNA–Protein interactions for RNA: YDL190C

UFD2, Transcript of Ubiquitin chain assembly factor (E4), yeastyeast

Gene UFD2, Length 2,886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD2YDL190C MHF2Q3E829 80 aa0.64□□□□□ -2.31
UFD2YDL190C MRPL38P35996 138 aaPredicted RBP0.63□□□□□ -2.31
UFD2YDL190C YBL071CP38185 102 aa0.63□□□□□ -2.31
UFD2YDL190C POC4Q12245 148 aaPredicted RBP0.63□□□□□ -2.31
UFD2YDL190C YPL038W-AQ3E7B4 63 aa0.63□□□□□ -2.31
UFD2YDL190C YCR085WP25650 117 aa0.63□□□□□ -2.31
UFD2YDL190C CWP2P43497 92 aa0.63□□□□□ -2.31
UFD2YDL190C RPL37AP49166 88 aaKnown RBP0.63□□□□□ -2.31
UFD2YDL190C MRX7P53869 86 aa0.63□□□□□ -2.31
UFD2YDL190C COX12Q01519 83 aa0.63□□□□□ -2.31
UFD2YDL190C CSF1Q12150 2958 aa0.63□□□□□ -2.31
UFD2YDL190C PAU6P0CE90 120 aa0.63□□□□□ -2.31
UFD2YDL190C PAU18P0CE91 120 aa0.63□□□□□ -2.31
UFD2YDL190C MRP17P28778 131 aa0.63□□□□□ -2.31
UFD2YDL190C HUG1Q6Q5K6 68 aa0.63□□□□□ -2.31
UFD2YDL190C AIM19P40502 157 aa0.62□□□□□ -2.31
UFD2YDL190C SPC1P46965 94 aa0.62□□□□□ -2.31
UFD2YDL190C NHP2P32495 156 aaPredicted RBP0.62□□□□□ -2.31
UFD2YDL190C TOM6P33448 61 aa0.62□□□□□ -2.31
UFD2YDL190C MVB12P42939 101 aa0.62□□□□□ -2.31
UFD2YDL190C YOR343CQ12484 108 aa0.62□□□□□ -2.31
UFD2YDL190C RPS29AP41057 56 aaKnown RBP0.61□□□□□ -2.31
UFD2YDL190C LCL1Q02786 101 aa0.61□□□□□ -2.31
UFD2YDL190C YNR034W-AQ3E841 98 aa0.61□□□□□ -2.31
UFD2YDL190C YLR255CO13574 117 aa0.61□□□□□ -2.31
UFD2YDL190C RPS11AP0CX47 156 aaKnown RBP0.61□□□□□ -2.31
UFD2YDL190C RPS11BP0CX48 156 aaKnown RBP0.61□□□□□ -2.31
UFD2YDL190C YHR214C-DP0CX93 97 aa0.61□□□□□ -2.31
UFD2YDL190C BSC4P53841 131 aa0.61□□□□□ -2.31
UFD2YDL190C COX19Q3E731 98 aa0.61□□□□□ -2.31
UFD2YDL190C PAU1P0CE88 120 aa0.6□□□□□ -2.31
UFD2YDL190C PAU14P0CE89 120 aa0.6□□□□□ -2.31
UFD2YDL190C PAU8P0CE92 120 aa0.6□□□□□ -2.31
UFD2YDL190C PAU11P0CE93 120 aa0.6□□□□□ -2.31
UFD2YDL190C YBR292CP38357 123 aa0.6□□□□□ -2.31
UFD2YDL190C PAU13P38725 120 aa0.6□□□□□ -2.31
UFD2YDL190C PAU10Q03050 120 aa0.6□□□□□ -2.31
UFD2YDL190C PAU9Q3E770 120 aa0.6□□□□□ -2.31
UFD2YDL190C YHR213W-AQ8TGT4 77 aa0.6□□□□□ -2.31
UFD2YDL190C SHU1P38751 150 aa0.6□□□□□ -2.31
UFD2YDL190C HHY1P39982 102 aa0.6□□□□□ -2.31
UFD2YDL190C YJR128WP47162 119 aa0.6□□□□□ -2.31
UFD2YDL190C PAU4P53427 120 aa0.6□□□□□ -2.31
UFD2YDL190C YDR381C-AQ3E6R5 114 aa0.6□□□□□ -2.31
UFD2YDL190C YHR213W-BQ8TGK1 99 aa0.6□□□□□ -2.31
UFD2YDL190C YFR010W-AP0C5N0 62 aa0.59□□□□□ -2.31
UFD2YDL190C MPC2P38857 129 aa0.59□□□□□ -2.31
UFD2YDL190C PAU20Q08322 120 aa0.59□□□□□ -2.31
UFD2YDL190C TRA1P38811 3744 aa0.59□□□□□ -2.31
UFD2YDL190C YMR141CP40211 102 aa0.59□□□□□ -2.32
UFD2YDL190C YDR119W-AQ2V2P9 66 aa0.59□□□□□ -2.32
UFD2YDL190C LSM2P38203 95 aaKnown RBP0.58□□□□□ -2.32
UFD2YDL190C RPL37BP51402 88 aaKnown RBP0.58□□□□□ -2.32
UFD2YDL190C YOR314WQ12506 109 aa0.58□□□□□ -2.32
UFD2YDL190C YPR145C-AQ2V2P0 78 aa0.58□□□□□ -2.32
UFD2YDL190C YKL065W-AQ2V2P2 73 aa0.58□□□□□ -2.32
UFD2YDL190C YDR010CQ12426 110 aa0.58□□□□□ -2.32
UFD2YDL190C PAI3P01094 68 aa0.57□□□□□ -2.32
UFD2YDL190C YER188C-AP0C0V2 99 aa0.57□□□□□ -2.32
UFD2YDL190C RPS27AP35997 82 aaKnown RBP0.57□□□□□ -2.32
UFD2YDL190C PDX3P38075 228 aaKnown RBP0.57□□□□□ -2.32
UFD2YDL190C RPS27BP38711 82 aa0.57□□□□□ -2.32
UFD2YDL190C YOR105WQ08504 108 aa0.57□□□□□ -2.32
UFD2YDL190C YOR034C-AQ3E735 80 aa0.57□□□□□ -2.32
UFD2YDL190C YNL042W-BQ3E7Z2 85 aa0.57□□□□□ -2.32
UFD2YDL190C FPR2P32472 135 aa0.56□□□□□ -2.32
UFD2YDL190C SWM2P40342 146 aa0.56□□□□□ -2.32
UFD2YDL190C PAU23Q07987 124 aa0.56□□□□□ -2.32
UFD2YDL190C PAU17Q12370 124 aa0.56□□□□□ -2.32
UFD2YDL190C YGR121W-AQ3E816 71 aa0.56□□□□□ -2.32
UFD2YDL190C NOP10Q6Q547 58 aaPredicted RBP0.56□□□□□ -2.32
UFD2YDL190C YAL065CO13511 128 aa0.56□□□□□ -2.32
UFD2YDL190C YIL156W-BQ2V2P4 73 aa0.56□□□□□ -2.32
UFD2YDL190C RPS29BP41058 56 aaKnown RBP0.55□□□□□ -2.32
UFD2YDL190C YBR072C-AQ3E794 53 aa0.55□□□□□ -2.32
UFD2YDL190C QCR9P22289 66 aa0.55□□□□□ -2.32
UFD2YDL190C YHR173CP38864 112 aa0.55□□□□□ -2.32
UFD2YDL190C YMR122W-AQ3E842 84 aa0.55□□□□□ -2.32
UFD2YDL190C Q0032Q9ZZX7 96 aa0.55□□□□□ -2.32
UFD2YDL190C COX7P10174 60 aa0.55□□□□□ -2.32
UFD2YDL190C ATX1P38636 73 aa0.54□□□□□ -2.32
UFD2YDL190C YBR201C-AQ2V2Q3 67 aa0.54□□□□□ -2.32
UFD2YDL190C YFL041W-AQ3E817 63 aa0.54□□□□□ -2.32
UFD2YDL190C ATP18P81450 59 aa0.53□□□□□ -2.32
UFD2YDL190C SIP18P50263 79 aa0.53□□□□□ -2.32
UFD2YDL190C YDL022C-AP0C5L6 82 aa0.52□□□□□ -2.33
UFD2YDL190C TIM12P32830 109 aa0.52□□□□□ -2.33
UFD2YDL190C RPL38P49167 78 aaKnown RBP0.52□□□□□ -2.33
UFD2YDL190C YOL097W-AQ3E7Y9 61 aa0.52□□□□□ -2.33
UFD2YDL190C SGF11Q03067 99 aa0.52□□□□□ -2.33
UFD2YDL190C YLR157W-EP0CF00 54 aa0.51□□□□□ -2.33
UFD2YDL190C SSS1P35179 80 aa0.51□□□□□ -2.33
UFD2YDL190C SPI1P40092 148 aa0.51□□□□□ -2.33
UFD2YDL190C YLR307C-AQ3E825 87 aa0.51□□□□□ -2.33
UFD2YDL190C YNL198CP40166 100 aa0.51□□□□□ -2.33
UFD2YDL190C RPC10P40422 70 aa0.51□□□□□ -2.33
UFD2YDL190C HOR7Q05827 59 aa0.51□□□□□ -2.33
UFD2YDL190C ATP17Q06405 101 aa0.51□□□□□ -2.33
UFD2YDL190C SDH6Q3E785 79 aa0.51□□□□□ -2.33
UFD2YDL190C PAU7P39545 55 aa0.5□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 29.3 ms