RNA–Protein interactions for RNA: YDL116W

NUP84, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP84, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP84YDL116W RPL43BP0CX26 92 aa4.89□□□□□ -1.63
NUP84YDL116W YGR240C-AQ3E786 66 aa4.89□□□□□ -1.63
NUP84YDL116W ICS3P47034 131 aa4.89□□□□□ -1.63
NUP84YDL116W YMR175W-AQ3E766 64 aa4.88□□□□□ -1.63
NUP84YDL116W TSC3Q3E790 80 aa4.88□□□□□ -1.63
NUP84YDL116W BET1P22804 142 aa4.88□□□□□ -1.63
NUP84YDL116W GAT4P40569 121 aa4.88□□□□□ -1.63
NUP84YDL116W RDS3Q06835 107 aaPredicted RBP4.88□□□□□ -1.63
NUP84YDL116W YKL183C-AQ3E765 70 aa4.88□□□□□ -1.63
NUP84YDL116W YFL019CP43576 117 aa4.87□□□□□ -1.63
NUP84YDL116W YBR230W-AQ3E762 66 aa4.87□□□□□ -1.63
NUP84YDL116W YJL127C-BQ3E828 52 aa4.87□□□□□ -1.63
NUP84YDL116W RPC10P40422 70 aa4.86□□□□□ -1.63
NUP84YDL116W YBR121C-AP0C5L4 52 aa4.85□□□□□ -1.63
NUP84YDL116W YDR115WQ04598 105 aa4.85□□□□□ -1.63
NUP84YDL116W TOR1P35169 2470 aa4.85□□□□□ -1.63
NUP84YDL116W RPL29P05747 59 aaPredicted RBP4.85□□□□□ -1.63
NUP84YDL116W YBL039W-BP0C268 59 aa4.85□□□□□ -1.63
NUP84YDL116W RPL33AP05744 107 aaKnown RBP4.84□□□□□ -1.63
NUP84YDL116W RPL33BP41056 107 aaKnown RBP4.84□□□□□ -1.63
NUP84YDL116W YHR213W-BQ8TGK1 99 aa4.84□□□□□ -1.63
NUP84YDL116W FYV5P25585 152 aa4.84□□□□□ -1.64
NUP84YDL116W YIL102CP40488 101 aa4.84□□□□□ -1.64
NUP84YDL116W YOR268CQ08734 132 aa4.84□□□□□ -1.64
NUP84YDL116W YAR023CD6VPM8 179 aa4.83□□□□□ -1.64
NUP84YDL116W SGF11Q03067 99 aa4.83□□□□□ -1.64
NUP84YDL116W TDA8Q6B2U8 126 aa4.83□□□□□ -1.64
NUP84YDL116W UBC4P15731 148 aa4.82□□□□□ -1.64
NUP84YDL116W HOT13P36078 116 aa4.82□□□□□ -1.64
NUP84YDL116W SNA2P56508 79 aa4.82□□□□□ -1.64
NUP84YDL116W RSM19P53733 91 aaPredicted RBP4.82□□□□□ -1.64
NUP84YDL116W Q0032Q9ZZX7 96 aa4.82□□□□□ -1.64
NUP84YDL116W NUM1Q00402 2748 aa4.81□□□□□ -1.64
NUP84YDL116W YHR007C-AQ07074 71 aa4.81□□□□□ -1.64
NUP84YDL116W YJL133C-AQ3E7A3 74 aa4.81□□□□□ -1.64
NUP84YDL116W YGR035W-AQ45U48 73 aa4.81□□□□□ -1.64
NUP84YDL116W YLL066W-BQ8TGJ7 56 aa4.81□□□□□ -1.64
NUP84YDL116W RPL26AP05743 127 aaKnown RBP4.8□□□□□ -1.64
NUP84YDL116W SPC1P46965 94 aa4.8□□□□□ -1.64
NUP84YDL116W RPL26BP53221 127 aaKnown RBP4.8□□□□□ -1.64
NUP84YDL116W YDL241WQ07738 123 aa4.8□□□□□ -1.64
NUP84YDL116W YMR230W-AQ3E7B5 62 aa4.8□□□□□ -1.64
NUP84YDL116W SBH1P52870 82 aa4.79□□□□□ -1.64
NUP84YDL116W BSC4P53841 131 aa4.79□□□□□ -1.64
NUP84YDL116W YOR314WQ12506 109 aa4.79□□□□□ -1.64
NUP84YDL116W KSH1Q8TGJ3 72 aa4.78□□□□□ -1.64
NUP84YDL116W YOL166W-AQ8TGJ1 51 aa4.77□□□□□ -1.65
NUP84YDL116W SPT4P32914 102 aaPredicted RBP4.77□□□□□ -1.65
NUP84YDL116W COX23P38824 151 aa4.77□□□□□ -1.65
NUP84YDL116W EDC2P40023 145 aaPredicted RBP4.77□□□□□ -1.65
NUP84YDL116W YLR307C-AQ3E825 87 aa4.77□□□□□ -1.65
NUP84YDL116W YPR010C-AA5Z2X5 72 aa4.76□□□□□ -1.65
NUP84YDL116W RPS30AP0CX33 63 aaKnown RBP4.75□□□□□ -1.65
NUP84YDL116W RPS30BP0CX34 63 aaKnown RBP4.75□□□□□ -1.65
NUP84YDL116W YHL005CP38752 130 aa4.75□□□□□ -1.65
NUP84YDL116W YLR162WQ06235 118 aa4.75□□□□□ -1.65
NUP84YDL116W LIP1Q03579 150 aa4.74□□□□□ -1.65
NUP84YDL116W YDR010CQ12426 110 aa4.74□□□□□ -1.65
NUP84YDL116W YGL193CP53097 103 aa4.74□□□□□ -1.65
NUP84YDL116W YNL042W-BQ3E7Z2 85 aa4.74□□□□□ -1.65
NUP84YDL116W YCL042WP25572 119 aa4.73□□□□□ -1.65
NUP84YDL116W GIS2P53849 153 aaKnown RBP RIP-Chip data4.73□□□□□ -1.65not detected
NUP84YDL116W RPL36BO14455 100 aaKnown RBP4.72□□□□□ -1.65
NUP84YDL116W PEX22P39718 180 aa4.72□□□□□ -1.65
NUP84YDL116W YOR381W-AQ3E804 55 aa4.72□□□□□ -1.65
NUP84YDL116W DDR2P89113 61 aa4.71□□□□□ -1.65
NUP84YDL116W ECM19Q06011 112 aa4.71□□□□□ -1.65
NUP84YDL116W RTC6O14464 93 aa4.71□□□□□ -1.66
NUP84YDL116W YGR121W-AQ3E816 71 aa4.71□□□□□ -1.66
NUP84YDL116W RPL36AP05745 100 aaPredicted RBP4.7□□□□□ -1.66
NUP84YDL116W SFT1P43682 97 aa4.7□□□□□ -1.66
NUP84YDL116W YEL045CP32616 141 aa4.69□□□□□ -1.66
NUP84YDL116W YOR072WQ08486 104 aa4.69□□□□□ -1.66
NUP84YDL116W MIC10Q96VH5 97 aa4.69□□□□□ -1.66
NUP84YDL116W YPR195CQ06594 109 aa4.67□□□□□ -1.66
NUP84YDL116W AUA1P32450 94 aa4.65□□□□□ -1.67
NUP84YDL116W YCR043CP25361 127 aa4.64□□□□□ -1.67
NUP84YDL116W YOL013W-AP0C272 63 aaPredicted RBP4.63□□□□□ -1.67
NUP84YDL116W MMS2P53152 137 aa4.63□□□□□ -1.67
NUP84YDL116W YDR182W-AQ3E796 67 aa4.63□□□□□ -1.67
NUP84YDL116W CUP1-1P0CX80 61 aa4.62□□□□□ -1.67
NUP84YDL116W CUP1-2P0CX81 61 aa4.62□□□□□ -1.67
NUP84YDL116W YAR064WP39563 99 aa4.61□□□□□ -1.67
NUP84YDL116W YBR027CP38220 110 aa4.61□□□□□ -1.67
NUP84YDL116W YMR122CQ03879 124 aa4.61□□□□□ -1.67
NUP84YDL116W KTI11Q3E840 82 aa4.6□□□□□ -1.67
NUP84YDL116W YJR085CP47131 105 aaKnown RBP4.58□□□□□ -1.68
NUP84YDL116W YGL041C-BQ3E750 60 aa4.58□□□□□ -1.68
NUP84YDL116W RPS28BP0C0X0 67 aaKnown RBP4.58□□□□□ -1.68
NUP84YDL116W RPS28AQ3E7X9 67 aaPredicted RBP4.58□□□□□ -1.68
NUP84YDL116W YPR153WQ06537 140 aa4.57□□□□□ -1.68
NUP84YDL116W YDR034C-AP0C289 58 aa4.56□□□□□ -1.68
NUP84YDL116W YJL197C-AP0C5P0 93 aa4.56□□□□□ -1.68
NUP84YDL116W DYN1P36022 4092 aa4.56□□□□□ -1.68
NUP84YDL116W YLR157W-DP0CE99 70 aa4.55□□□□□ -1.68
NUP84YDL116W LCL2Q08045 131 aa4.55□□□□□ -1.68
NUP84YDL116W HHF1P02309 103 aaKnown RBP4.54□□□□□ -1.68
NUP84YDL116W YFL067WP43537 175 aa4.54□□□□□ -1.68
NUP84YDL116W YGL034CP53186 121 aa4.54□□□□□ -1.68
NUP84YDL116W YER188C-AP0C0V2 99 aa4.53□□□□□ -1.68
Retrieved 100 of 5,963 RNA–protein pairs in 55.7 ms