RNA–Protein interactions for RNA: YBR103W

SIF2, Transcript of WD40 repeat-containing subunit of Set3C histone deacetylase complex, yeastyeast

Gene SIF2, Length 1,608 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIF2YBR103W YGR035W-AQ45U48 73 aa3.68□□□□□ -1.82
SIF2YBR103W HHF1P02309 103 aaKnown RBP3.67□□□□□ -1.82
SIF2YBR103W QCR8P08525 94 aa3.67□□□□□ -1.82
SIF2YBR103W YJR107C-AP0CT86 78 aa3.67□□□□□ -1.82
SIF2YBR103W YFL067WP43537 175 aa3.67□□□□□ -1.82
SIF2YBR103W MRPS12P53732 153 aa3.67□□□□□ -1.82
SIF2YBR103W YNL162W-AQ3E7A8 72 aa3.67□□□□□ -1.82
SIF2YBR103W YAL064WP39711 94 aa3.66□□□□□ -1.82
SIF2YBR103W RPR2P40571 144 aa3.66□□□□□ -1.82
SIF2YBR103W YEL045CP32616 141 aa3.66□□□□□ -1.82
SIF2YBR103W YMR122CQ03879 124 aa3.66□□□□□ -1.82
SIF2YBR103W ARC15P40518 154 aaRIP-Chip data3.65□□□□□ -1.83not detected
SIF2YBR103W EDC1P53080 175 aaPredicted RBP3.65□□□□□ -1.83
SIF2YBR103W YER188C-AP0C0V2 99 aa3.64□□□□□ -1.83
SIF2YBR103W DDR48P18899 430 aaKnown RBP3.64□□□□□ -1.83
SIF2YBR103W RRT1P38192 103 aa3.64□□□□□ -1.83
SIF2YBR103W RGM1Q00453 211 aa3.64□□□□□ -1.83
SIF2YBR103W HOR7Q05827 59 aa3.64□□□□□ -1.83
SIF2YBR103W YOL160WQ08321 113 aa3.64□□□□□ -1.83
SIF2YBR103W NOP10Q6Q547 58 aaPredicted RBP3.64□□□□□ -1.83
SIF2YBR103W YER135CP40082 130 aa3.63□□□□□ -1.83
SIF2YBR103W KRE9P39005 276 aa3.62□□□□□ -1.83
SIF2YBR103W RPL38P49167 78 aaKnown RBP3.62□□□□□ -1.83
SIF2YBR103W YOR020W-AQ3E824 90 aa3.62□□□□□ -1.83
SIF2YBR103W YCR043CP25361 127 aa3.62□□□□□ -1.83
SIF2YBR103W RPS30AP0CX33 63 aaKnown RBP3.61□□□□□ -1.83
SIF2YBR103W RPS30BP0CX34 63 aaKnown RBP3.61□□□□□ -1.83
SIF2YBR103W ATP18P81450 59 aa3.61□□□□□ -1.83
SIF2YBR103W YPR153WQ06537 140 aa3.61□□□□□ -1.83
SIF2YBR103W YLR236CA0A023PZG4 107 aa3.6□□□□□ -1.83
SIF2YBR103W YHR212W-AP0CX91 67 aa3.6□□□□□ -1.83
SIF2YBR103W FYV5P25585 152 aa3.6□□□□□ -1.83
SIF2YBR103W MRPL38P35996 138 aaPredicted RBP3.6□□□□□ -1.83
SIF2YBR103W YJR146WP47174 117 aa3.6□□□□□ -1.83
SIF2YBR103W YOR034C-AQ3E735 80 aa3.6□□□□□ -1.83
SIF2YBR103W YMR244WQ04018 355 aa3.59□□□□□ -1.84
SIF2YBR103W YOL166W-AQ8TGJ1 51 aa3.59□□□□□ -1.84
SIF2YBR103W YJR085CP47131 105 aaKnown RBP3.58□□□□□ -1.84
SIF2YBR103W YPS5P53057 165 aa3.57□□□□□ -1.84
SIF2YBR103W HUB1Q6Q546 73 aa3.57□□□□□ -1.84
SIF2YBR103W YCR095W-AQ3E787 52 aa3.56□□□□□ -1.84
SIF2YBR103W YJL027CP47063 138 aaPredicted RBP3.55□□□□□ -1.84
SIF2YBR103W QCR10P37299 77 aa3.55□□□□□ -1.84
SIF2YBR103W POR2P40478 281 aa3.55□□□□□ -1.84
SIF2YBR103W YIL102CP40488 101 aa3.54□□□□□ -1.84
SIF2YBR103W YFR009W-AP0C5M9 85 aa3.53□□□□□ -1.84
SIF2YBR103W YEL008WP40001 126 aa3.53□□□□□ -1.84
SIF2YBR103W YPR013CQ12145 317 aa3.52□□□□□ -1.85
SIF2YBR103W YBR200W-AQ3E755 54 aa3.52□□□□□ -1.85
SIF2YBR103W LIP1Q03579 150 aa3.52□□□□□ -1.85
SIF2YBR103W YER078W-AQ3E7A2 54 aa3.52□□□□□ -1.85
SIF2YBR103W TAR1Q8TGM6 124 aa3.52□□□□□ -1.85
SIF2YBR103W SPC1P46965 94 aa3.51□□□□□ -1.85
SIF2YBR103W YLL006W-AQ3E814 58 aa3.51□□□□□ -1.85
SIF2YBR103W AUA1P32450 94 aa3.5□□□□□ -1.85
SIF2YBR103W SNA2P56508 79 aa3.5□□□□□ -1.85
SIF2YBR103W YDR010CQ12426 110 aa3.49□□□□□ -1.85
SIF2YBR103W YFR032C-BQ8TGU2 87 aa3.49□□□□□ -1.85
SIF2YBR103W YPR010C-AA5Z2X5 72 aa3.48□□□□□ -1.85
SIF2YBR103W SOM1Q05676 74 aa3.48□□□□□ -1.85
SIF2YBR103W YIL156W-BQ2V2P4 73 aa3.48□□□□□ -1.85
SIF2YBR103W RPS11AP0CX47 156 aaKnown RBP3.48□□□□□ -1.85
SIF2YBR103W RPS11BP0CX48 156 aaKnown RBP3.48□□□□□ -1.85
SIF2YBR103W YBR219CP38317 127 aa3.48□□□□□ -1.85
SIF2YBR103W YOL014WQ08110 124 aa3.48□□□□□ -1.85
SIF2YBR103W SDH6Q3E785 79 aa3.48□□□□□ -1.85
SIF2YBR103W YNL146C-AQ3E7Z1 64 aa3.48□□□□□ -1.85
SIF2YBR103W COX23P38824 151 aa3.47□□□□□ -1.85
SIF2YBR103W YLR157W-DP0CE99 70 aa3.46□□□□□ -1.86
SIF2YBR103W YGL149WP53116 101 aa3.46□□□□□ -1.86
SIF2YBR103W BSC4P53841 131 aa3.46□□□□□ -1.86
SIF2YBR103W MRX7P53869 86 aa3.46□□□□□ -1.86
SIF2YBR103W YNL042W-BQ3E7Z2 85 aa3.46□□□□□ -1.86
SIF2YBR103W YOL085CQ99345 113 aa3.46□□□□□ -1.86
SIF2YBR103W YCR001WP25347 104 aa3.45□□□□□ -1.86
SIF2YBR103W EDC2P40023 145 aaPredicted RBP3.45□□□□□ -1.86
SIF2YBR103W PMP3P87284 55 aa3.45□□□□□ -1.86
SIF2YBR103W VAM10Q08474 114 aa3.45□□□□□ -1.86
SIF2YBR103W CCW12Q12127 133 aa3.45□□□□□ -1.86
SIF2YBR103W YMR122W-AQ3E842 84 aa3.45□□□□□ -1.86
SIF2YBR103W YMR001C-AQ8TGS9 76 aa3.45□□□□□ -1.86
SIF2YBR103W YAR023CD6VPM8 179 aa3.44□□□□□ -1.86
SIF2YBR103W MRPS8Q03799 155 aa3.44□□□□□ -1.86
SIF2YBR103W YDR115WQ04598 105 aa3.44□□□□□ -1.86
SIF2YBR103W ATP17Q06405 101 aa3.44□□□□□ -1.86
SIF2YBR103W YOR011W-AQ3E807 68 aa3.44□□□□□ -1.86
SIF2YBR103W MDN1Q12019 4910 aaKnown RBP3.44□□□□□ -1.86
SIF2YBR103W YGR025WP53216 100 aa3.44□□□□□ -1.86
SIF2YBR103W AQY2P0CD90 149 aa3.42□□□□□ -1.86
SIF2YBR103W YHR213W-BQ8TGK1 99 aa3.42□□□□□ -1.86
SIF2YBR103W RPL29P05747 59 aaPredicted RBP3.41□□□□□ -1.86
SIF2YBR103W YOL013W-AP0C272 63 aaPredicted RBP3.41□□□□□ -1.86
SIF2YBR103W IGD1P43598 195 aa3.41□□□□□ -1.86
SIF2YBR103W YBL008W-AQ3E821 79 aa3.41□□□□□ -1.86
SIF2YBR103W RDS3Q06835 107 aaPredicted RBP3.41□□□□□ -1.86
SIF2YBR103W YBR027CP38220 110 aa3.4□□□□□ -1.87
SIF2YBR103W FYV12Q08559 129 aa3.4□□□□□ -1.87
SIF2YBR103W YJL133C-AQ3E7A3 74 aa3.4□□□□□ -1.87
SIF2YBR103W YJL197C-AP0C5P0 93 aa3.39□□□□□ -1.87
SIF2YBR103W YNL122CP53921 115 aaPredicted RBP3.39□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms