RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W FYV5P25585 152 aa2.3□□□□□ -2.04
NUP60YAR002W YDR029WQ12111 104 aa2.3□□□□□ -2.04
NUP60YAR002W YGL041C-BQ3E750 60 aa2.3□□□□□ -2.04
NUP60YAR002W YBR230W-AQ3E762 66 aa2.3□□□□□ -2.04
NUP60YAR002W YJL127C-BQ3E828 52 aa2.3□□□□□ -2.04
NUP60YAR002W YHR139C-AO13536 103 aa2.29□□□□□ -2.04
NUP60YAR002W TSC3Q3E790 80 aa2.29□□□□□ -2.04
NUP60YAR002W YNL042W-BQ3E7Z2 85 aa2.29□□□□□ -2.04
NUP60YAR002W ECM12O13529 151 aa2.28□□□□□ -2.04
NUP60YAR002W RAD6P06104 172 aa2.28□□□□□ -2.04
NUP60YAR002W YFR009W-AP0C5M9 85 aa2.28□□□□□ -2.04
NUP60YAR002W PEX22P39718 180 aa2.28□□□□□ -2.04
NUP60YAR002W GAT4P40569 121 aa2.28□□□□□ -2.04
NUP60YAR002W SFT1P43682 97 aa2.28□□□□□ -2.04
NUP60YAR002W YPR195CQ06594 109 aa2.28□□□□□ -2.04
NUP60YAR002W EMC6Q12431 108 aa2.28□□□□□ -2.04
NUP60YAR002W RSM19P53733 91 aaPredicted RBP2.28□□□□□ -2.05
NUP60YAR002W YDR034C-AP0C289 58 aa2.27□□□□□ -2.05
NUP60YAR002W YLR156WP0CE96 114 aa2.27□□□□□ -2.05
NUP60YAR002W YLR159WP0CE97 114 aa2.27□□□□□ -2.05
NUP60YAR002W YLR161WP0CE98 114 aa2.27□□□□□ -2.05
NUP60YAR002W BET1P22804 142 aa2.27□□□□□ -2.05
NUP60YAR002W YAR1P46683 200 aa2.27□□□□□ -2.05
NUP60YAR002W EDC1P53080 175 aaPredicted RBP2.27□□□□□ -2.05
NUP60YAR002W YGL193CP53097 103 aa2.27□□□□□ -2.05
NUP60YAR002W SPT4P32914 102 aaPredicted RBP2.26□□□□□ -2.05
NUP60YAR002W YHL042WP38729 150 aa2.26□□□□□ -2.05
NUP60YAR002W YNL184CP53876 108 aa2.26□□□□□ -2.05
NUP60YAR002W YER039C-AP0CD97 72 aa2.25□□□□□ -2.05
NUP60YAR002W GIS2P53849 153 aaKnown RBP RIP-Chip data2.25□□□□□ -2.05not detected
NUP60YAR002W DDR2P89113 61 aa2.25□□□□□ -2.05
NUP60YAR002W SHH4Q06236 168 aa2.25□□□□□ -2.05
NUP60YAR002W YSY6P38374 65 aa2.24□□□□□ -2.05
NUP60YAR002W ICS3P47034 131 aa2.24□□□□□ -2.05
NUP60YAR002W RPL38P49167 78 aaKnown RBP2.24□□□□□ -2.05
NUP60YAR002W YGR039WP53225 103 aa2.24□□□□□ -2.05
NUP60YAR002W COF1Q03048 143 aaKnown RBP2.24□□□□□ -2.05
NUP60YAR002W YDR119W-AQ2V2P9 66 aa2.24□□□□□ -2.05
NUP60YAR002W YLR285C-AQ3E771 56 aa2.24□□□□□ -2.05
NUP60YAR002W RPL36BO14455 100 aaKnown RBP2.24□□□□□ -2.05
NUP60YAR002W TDA2P40045 126 aa2.24□□□□□ -2.05
NUP60YAR002W BSC4P53841 131 aa2.24□□□□□ -2.05
NUP60YAR002W YHR007C-AQ07074 71 aa2.24□□□□□ -2.05
NUP60YAR002W YOR072WQ08486 104 aa2.24□□□□□ -2.05
NUP60YAR002W YHR213W-BQ8TGK1 99 aa2.24□□□□□ -2.05
NUP60YAR002W COX23P38824 151 aa2.23□□□□□ -2.05
NUP60YAR002W EDC2P40023 145 aaPredicted RBP2.23□□□□□ -2.05
NUP60YAR002W YEL045CP32616 141 aa2.22□□□□□ -2.05
NUP60YAR002W YHL018WP38744 120 aaPredicted RBP2.22□□□□□ -2.05
NUP60YAR002W RSM18P40033 138 aa2.22□□□□□ -2.05
NUP60YAR002W YOL014WQ08110 124 aa2.22□□□□□ -2.05
NUP60YAR002W YJL133C-AQ3E7A3 74 aa2.22□□□□□ -2.05
NUP60YAR002W YPL038W-AQ3E7B4 63 aa2.22□□□□□ -2.05
NUP60YAR002W TDA8Q6B2U8 126 aa2.22□□□□□ -2.05
NUP60YAR002W LCL2Q08045 131 aa2.21□□□□□ -2.06
NUP60YAR002W ATP20Q12233 115 aa2.21□□□□□ -2.06
NUP60YAR002W YBL112CQ3E7Y4 105 aa2.21□□□□□ -2.06
NUP60YAR002W ECM19Q06011 112 aa2.2□□□□□ -2.06
NUP60YAR002W YKL183C-AQ3E765 70 aa2.2□□□□□ -2.06
NUP60YAR002W YGR121W-AQ3E816 71 aa2.2□□□□□ -2.06
NUP60YAR002W YCR050CP25630 102 aa2.19□□□□□ -2.06
NUP60YAR002W YJR085CP47131 105 aaKnown RBP2.19□□□□□ -2.06
NUP60YAR002W SPG1P50088 95 aa2.19□□□□□ -2.06
NUP60YAR002W LCL1Q02786 101 aa2.19□□□□□ -2.06
NUP60YAR002W YLR162WQ06235 118 aa2.19□□□□□ -2.06
NUP60YAR002W YJL197C-AP0C5P0 93 aa2.18□□□□□ -2.06
NUP60YAR002W MIC10Q96VH5 97 aa2.18□□□□□ -2.06
NUP60YAR002W YOR304C-AO14468 76 aa2.17□□□□□ -2.06
NUP60YAR002W TOM6P33448 61 aa2.17□□□□□ -2.06
NUP60YAR002W YBR027CP38220 110 aa2.17□□□□□ -2.06
NUP60YAR002W MMS2P53152 137 aa2.17□□□□□ -2.06
NUP60YAR002W YOR314WQ12506 109 aa2.17□□□□□ -2.06
NUP60YAR002W YDR246W-AQ3E763 66 aa2.17□□□□□ -2.06
NUP60YAR002W YER187WP40102 141 aa2.16□□□□□ -2.06
NUP60YAR002W NOP10Q6Q547 58 aaPredicted RBP2.15□□□□□ -2.07
NUP60YAR002W YOR268CQ08734 132 aa2.14□□□□□ -2.07
NUP60YAR002W YLR157W-DP0CE99 70 aa2.13□□□□□ -2.07
NUP60YAR002W AIM4P38305 123 aaPredicted RBP2.13□□□□□ -2.07
NUP60YAR002W YAR064WP39563 99 aa2.13□□□□□ -2.07
NUP60YAR002W YPL080CQ02826 108 aa2.13□□□□□ -2.07
NUP60YAR002W YOL097W-AQ3E7Y9 61 aa2.13□□□□□ -2.07
NUP60YAR002W YIR021W-AQ3E739 70 aa2.13□□□□□ -2.07
NUP60YAR002W RPL36AP05745 100 aaPredicted RBP2.12□□□□□ -2.07
NUP60YAR002W YIL102CP40488 101 aa2.12□□□□□ -2.07
NUP60YAR002W YGL149WP53116 101 aa2.12□□□□□ -2.07
NUP60YAR002W LIP1Q03579 150 aa2.12□□□□□ -2.07
NUP60YAR002W YDR182W-AQ3E796 67 aa2.12□□□□□ -2.07
NUP60YAR002W YOL166W-AQ8TGJ1 51 aa2.12□□□□□ -2.07
NUP60YAR002W DDR48P18899 430 aaKnown RBP2.11□□□□□ -2.07
NUP60YAR002W YOL013W-AP0C272 63 aaPredicted RBP2.1□□□□□ -2.07
NUP60YAR002W YPR153WQ06537 140 aa2.09□□□□□ -2.07
NUP60YAR002W YDL012CQ12489 107 aa2.09□□□□□ -2.08
NUP60YAR002W YHL005CP38752 130 aa2.07□□□□□ -2.08
NUP60YAR002W KSH1Q8TGJ3 72 aa2.07□□□□□ -2.08
NUP60YAR002W YHR073W-AP0C5N7 58 aa2.06□□□□□ -2.08
NUP60YAR002W RPS30AP0CX33 63 aaKnown RBP2.06□□□□□ -2.08
NUP60YAR002W RPS30BP0CX34 63 aaKnown RBP2.06□□□□□ -2.08
NUP60YAR002W YHR125WP38831 101 aa2.06□□□□□ -2.08
NUP60YAR002W KTI11Q3E840 82 aa2.06□□□□□ -2.08
NUP60YAR002W YLR361C-AQ3E795 98 aa2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms