RNA–Protein interactions for RNA: ENST00000642141.1

SCN1A-222, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

Gene SCN1A, Length 921 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-222ENST00000642141 NFATC1O95644 943 aa10.9□□□□□ -0.66
SCN1A-222ENST00000642141 TBX18O95935 607 aa10.9□□□□□ -0.66
SCN1A-222ENST00000642141 CYP17A1P05093 508 aa10.9□□□□□ -0.66
SCN1A-222ENST00000642141 DRD1P21728 446 aa10.9□□□□□ -0.66
SCN1A-222ENST00000642141 PPP3CCP48454 512 aa10.9□□□□□ -0.66
SCN1A-222ENST00000642141 SLC7A9P82251 487 aa10.9□□□□□ -0.66
SCN1A-222ENST00000642141 MESP2Q0VG99 397 aa10.9□□□□□ -0.66
SCN1A-222ENST00000642141 HECTD3Q5T447 861 aa10.9□□□□□ -0.66
SCN1A-222ENST00000642141 INTS8Q75QN2 995 aaKnown RBP10.9□□□□□ -0.66
SCN1A-222ENST00000642141 GPRIN1Q7Z2K8 1008 aa10.9□□□□□ -0.66
SCN1A-222ENST00000642141 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.9□□□□□ -0.66
SCN1A-222ENST00000642141 TTC30AQ86WT1 665 aa10.9□□□□□ -0.66
SCN1A-222ENST00000642141 ADGRG2Q8IZP9 1017 aa10.9□□□□□ -0.66
SCN1A-222ENST00000642141 CRYBG2Q8N1P7 616 aa10.9□□□□□ -0.66
SCN1A-222ENST00000642141 CCDC33Q8N5R6 958 aa10.9□□□□□ -0.66
SCN1A-222ENST00000642141 NAT16Q8N8M0 369 aa10.9□□□□□ -0.66
SCN1A-222ENST00000642141 ZMIZ2Q8NF64 920 aa10.9□□□□□ -0.66
SCN1A-222ENST00000642141 TAF4BQ92750 862 aa10.9□□□□□ -0.66
SCN1A-222ENST00000642141 CEP295NLQ96MC4 621 aa10.9□□□□□ -0.66
SCN1A-222ENST00000642141 IMPG2Q9BZV3 1241 aa10.9□□□□□ -0.66
SCN1A-222ENST00000642141 NACA2Q9H009 215 aa10.9□□□□□ -0.66
SCN1A-222ENST00000642141 ZDHHC4Q9NPG8 344 aa10.9□□□□□ -0.66
SCN1A-222ENST00000642141 GMEB2Q9UKD1 530 aa10.9□□□□□ -0.66
SCN1A-222ENST00000642141 NUDT5Q9UKK9 219 aa10.9□□□□□ -0.66
SCN1A-222ENST00000642141 FANCMQ8IYD8 2048 aa10.9□□□□□ -0.66
SCN1A-222ENST00000642141 GREB1Q4ZG55 1949 aa10.9□□□□□ -0.67
SCN1A-222ENST00000642141 OTOGLQ3ZCN5 2332 aa10.89□□□□□ -0.67
SCN1A-222ENST00000642141 DCLK1O15075 740 aa10.89□□□□□ -0.67
SCN1A-222ENST00000642141 MAPK13O15264 365 aa10.89□□□□□ -0.67
SCN1A-222ENST00000642141 CYP26A1O43174 497 aa10.89□□□□□ -0.67
SCN1A-222ENST00000642141 ATG13O75143 517 aa10.89□□□□□ -0.67
SCN1A-222ENST00000642141 FAM200BP0CF97 657 aa10.89□□□□□ -0.67
SCN1A-222ENST00000642141 TGM1P22735 817 aa10.89□□□□□ -0.67
SCN1A-222ENST00000642141 OPRD1P41143 372 aa10.89□□□□□ -0.67
SCN1A-222ENST00000642141 PMS1P54277 932 aaKnown RBP10.89□□□□□ -0.67
SCN1A-222ENST00000642141 KDSRQ06136 332 aa10.89□□□□□ -0.67
SCN1A-222ENST00000642141 DHCR24Q15392 516 aa10.89□□□□□ -0.67
SCN1A-222ENST00000642141 GAB4Q2WGN9 574 aa10.89□□□□□ -0.67
SCN1A-222ENST00000642141 ZCWPW2Q504Y3 356 aa10.89□□□□□ -0.67
SCN1A-222ENST00000642141 DCAF17Q5H9S7 520 aaPredicted RBP10.89□□□□□ -0.67
SCN1A-222ENST00000642141 EMC10Q5UCC4 262 aa10.89□□□□□ -0.67
SCN1A-222ENST00000642141 TCERG1LQ5VWI1 586 aa10.89□□□□□ -0.67
SCN1A-222ENST00000642141 ANKRD40Q6AI12 368 aa10.89□□□□□ -0.67
SCN1A-222ENST00000642141 LAIR1Q6GTX8 287 aa10.89□□□□□ -0.67
SCN1A-222ENST00000642141 RHBDF2Q6PJF5 856 aa10.89□□□□□ -0.67
SCN1A-222ENST00000642141 KBTBD6Q86V97 674 aa10.89□□□□□ -0.67
SCN1A-222ENST00000642141 WDR5BQ86VZ2 330 aa10.89□□□□□ -0.67
SCN1A-222ENST00000642141 FAM160A2Q8N612 972 aaPredicted RBP10.89□□□□□ -0.67
SCN1A-222ENST00000642141 CCDC150Q8NCX0 1101 aa10.89□□□□□ -0.67
SCN1A-222ENST00000642141 WHAMMQ8TF30 809 aa10.89□□□□□ -0.67
SCN1A-222ENST00000642141 TATDN2Q93075 761 aa10.89□□□□□ -0.67
SCN1A-222ENST00000642141 CYFIP2Q96F07 1278 aa10.89□□□□□ -0.67
SCN1A-222ENST00000642141 HEXIM2Q96MH2 286 aaKnown RBP10.89□□□□□ -0.67
SCN1A-222ENST00000642141 ARID3AQ99856 593 aa10.89□□□□□ -0.67
SCN1A-222ENST00000642141 NT5C1AQ9BXI3 368 aa10.89□□□□□ -0.67
SCN1A-222ENST00000642141 NIF3L1Q9GZT8 377 aa10.89□□□□□ -0.67
SCN1A-222ENST00000642141 TMEM8AQ9HCN3 771 aa10.89□□□□□ -0.67
SCN1A-222ENST00000642141 PCDHA5Q9Y5H7 936 aa10.89□□□□□ -0.67
SCN1A-222ENST00000642141 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.89□□□□□ -0.67
SCN1A-222ENST00000642141 ANAPC1Q9H1A4 1944 aa10.89□□□□□ -0.67
SCN1A-222ENST00000642141 PTPRDP23468 1912 aa10.88□□□□□ -0.67
SCN1A-222ENST00000642141 TRIM49BA6NDI0 452 aa10.88□□□□□ -0.67
SCN1A-222ENST00000642141 K7EQS6 105 aa10.88□□□□□ -0.67
SCN1A-222ENST00000642141 MDM4O15151 490 aa10.88□□□□□ -0.67
SCN1A-222ENST00000642141 CETN3O15182 167 aa10.88□□□□□ -0.67
SCN1A-222ENST00000642141 RPP40O75818 363 aaKnown RBP10.88□□□□□ -0.67
SCN1A-222ENST00000642141 PAPSS2O95340 614 aaPredicted RBP10.88□□□□□ -0.67
SCN1A-222ENST00000642141 OLFM2O95897 454 aa10.88□□□□□ -0.67
SCN1A-222ENST00000642141 CCDC192P0DO97 292 aa10.88□□□□□ -0.67
SCN1A-222ENST00000642141 EPB41P11171 864 aaKnown RBP10.88□□□□□ -0.67
SCN1A-222ENST00000642141 ACO1P21399 889 aaKnown RBP10.88□□□□□ -0.67
SCN1A-222ENST00000642141 DMC1Q14565 340 aa10.88□□□□□ -0.67
SCN1A-222ENST00000642141 NFIL3Q16649 462 aa10.88□□□□□ -0.67
SCN1A-222ENST00000642141 LY6G5CQ5SRR4 150 aa10.88□□□□□ -0.67
SCN1A-222ENST00000642141 KRT39Q6A163 491 aa10.88□□□□□ -0.67
SCN1A-222ENST00000642141 CLEC20AQ6ZU45 233 aa10.88□□□□□ -0.67
SCN1A-222ENST00000642141 DGLUCYQ7Z3D6 616 aa10.88□□□□□ -0.67
SCN1A-222ENST00000642141 UNC93AQ86WB7 457 aa10.88□□□□□ -0.67
SCN1A-222ENST00000642141 C12orf40Q86WS4 652 aa10.88□□□□□ -0.67
SCN1A-222ENST00000642141 BBS7Q8IWZ6 715 aa10.88□□□□□ -0.67
SCN1A-222ENST00000642141 PDZD8Q8NEN9 1154 aa10.88□□□□□ -0.67
SCN1A-222ENST00000642141 ENGASEQ8NFI3 743 aa10.88□□□□□ -0.67
SCN1A-222ENST00000642141 SMARCE1Q969G3 411 aa10.88□□□□□ -0.67
SCN1A-222ENST00000642141 EXOC4Q96A65 974 aa10.88□□□□□ -0.67
SCN1A-222ENST00000642141 ERLEC1Q96DZ1 483 aa10.88□□□□□ -0.67
SCN1A-222ENST00000642141 CCDC34Q96HJ3 373 aa10.88□□□□□ -0.67
SCN1A-222ENST00000642141 ZFRQ96KR1 1074 aaKnown RBP10.88□□□□□ -0.67
SCN1A-222ENST00000642141 HNRNPABQ99729 332 aaKnown RBP10.88□□□□□ -0.67
SCN1A-222ENST00000642141 RMND1Q9NWS8 449 aa10.88□□□□□ -0.67
SCN1A-222ENST00000642141 OSER1Q9NX31 292 aa10.88□□□□□ -0.67
SCN1A-222ENST00000642141 IL37Q9NZH6 218 aa10.88□□□□□ -0.67
SCN1A-222ENST00000642141 SH3BP1Q9Y3L3 701 aa10.88□□□□□ -0.67
SCN1A-222ENST00000642141 A0A1W2PQH9 124 aa10.87□□□□□ -0.67
SCN1A-222ENST00000642141 DCDC2BA2VCK2 349 aa10.87□□□□□ -0.67
SCN1A-222ENST00000642141 HHLA1C9JL84 531 aa10.87□□□□□ -0.67
SCN1A-222ENST00000642141 SLC9A3R1O14745 358 aaPredicted RBP10.87□□□□□ -0.67
SCN1A-222ENST00000642141 TLR5O60602 858 aa10.87□□□□□ -0.67
SCN1A-222ENST00000642141 SMC2O95347 1197 aa10.87□□□□□ -0.67
SCN1A-222ENST00000642141 RETP07949 1114 aa10.87□□□□□ -0.67
SCN1A-222ENST00000642141 ADH5P11766 374 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms