RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 PAPSS1O43252 624 aaPredicted RBP12.95□□□□□ -0.34
LINC00339-213ENST00000642137 SART1O43290 800 aaKnown RBP12.95□□□□□ -0.34
LINC00339-213ENST00000642137 XYLBO75191 536 aa12.95□□□□□ -0.34
LINC00339-213ENST00000642137 RFPL2O75678 378 aa12.95□□□□□ -0.34
LINC00339-213ENST00000642137 GLP2RO95838 553 aa12.95□□□□□ -0.34
LINC00339-213ENST00000642137 ERBB2P04626 1255 aa12.95□□□□□ -0.34
LINC00339-213ENST00000642137 SCNN1AP37088 669 aa12.95□□□□□ -0.34
LINC00339-213ENST00000642137 PPP3CCP48454 512 aa12.95□□□□□ -0.34
LINC00339-213ENST00000642137 GALCP54803 685 aa12.95□□□□□ -0.34
LINC00339-213ENST00000642137 DAOAP59103 153 aa12.95□□□□□ -0.34
LINC00339-213ENST00000642137 USP46P62068 366 aa12.95□□□□□ -0.34
LINC00339-213ENST00000642137 GPC5P78333 572 aa12.95□□□□□ -0.34
LINC00339-213ENST00000642137 MRPS5P82675 430 aaKnown RBP12.95□□□□□ -0.34
LINC00339-213ENST00000642137 RBM10P98175 930 aaKnown RBP12.95□□□□□ -0.34
LINC00339-213ENST00000642137 SLC6A3Q01959 620 aa12.95□□□□□ -0.34
LINC00339-213ENST00000642137 ADIGQ0VDE8 80 aa12.95□□□□□ -0.34
LINC00339-213ENST00000642137 MTMR3Q13615 1198 aa12.95□□□□□ -0.34
LINC00339-213ENST00000642137 EFHC1Q5JVL4 640 aa12.95□□□□□ -0.34
LINC00339-213ENST00000642137 MMS22LQ6ZRQ5 1243 aa12.95□□□□□ -0.34
LINC00339-213ENST00000642137 MON1AQ86VX9 555 aa12.95□□□□□ -0.34
LINC00339-213ENST00000642137 XYLT1Q86Y38 959 aa12.95□□□□□ -0.34
LINC00339-213ENST00000642137 SIX6OS1Q8N1H7 587 aa12.95□□□□□ -0.34
LINC00339-213ENST00000642137 MYLIPQ8WY64 445 aa12.95□□□□□ -0.34
LINC00339-213ENST00000642137 OVCA2Q8WZ82 227 aa12.95□□□□□ -0.34
LINC00339-213ENST00000642137 MCRS1Q96EZ8 462 aa12.95□□□□□ -0.34
LINC00339-213ENST00000642137 GUCD1Q96NT3 240 aa12.95□□□□□ -0.34
LINC00339-213ENST00000642137 C11orf70Q9BRQ4 267 aa12.95□□□□□ -0.34
LINC00339-213ENST00000642137 LRRC3Q9BY71 257 aa12.95□□□□□ -0.34
LINC00339-213ENST00000642137 ULBP1Q9BZM6 244 aa12.95□□□□□ -0.34
LINC00339-213ENST00000642137 SFXN1Q9H9B4 322 aa12.95□□□□□ -0.34
LINC00339-213ENST00000642137 TJP2Q9UDY2 1190 aa12.95□□□□□ -0.34
LINC00339-213ENST00000642137 MAGED2Q9UNF1 606 aaPredicted RBP12.95□□□□□ -0.34
LINC00339-213ENST00000642137 NCANO14594 1321 aa12.94□□□□□ -0.34
LINC00339-213ENST00000642137 SPDYE4A6NLX3 237 aa12.94□□□□□ -0.34
LINC00339-213ENST00000642137 PIK3R2O00459 728 aa12.94□□□□□ -0.34
LINC00339-213ENST00000642137 CCL16O15467 120 aa12.94□□□□□ -0.34
LINC00339-213ENST00000642137 LINC01565O15544 149 aa12.94□□□□□ -0.34
LINC00339-213ENST00000642137 FGF19O95750 216 aa12.94□□□□□ -0.34
LINC00339-213ENST00000642137 GLI1P08151 1106 aa12.94□□□□□ -0.34
LINC00339-213ENST00000642137 USP17L7P0C7H9 530 aa12.94□□□□□ -0.34
LINC00339-213ENST00000642137 TMEM253P0C7T8 217 aa12.94□□□□□ -0.34
LINC00339-213ENST00000642137 TAF10Q12962 218 aa12.94□□□□□ -0.34
LINC00339-213ENST00000642137 PABPC1LQ4VXU2 614 aaKnown RBP12.94□□□□□ -0.34
LINC00339-213ENST00000642137 HS1BP3Q53T59 392 aa12.94□□□□□ -0.34
LINC00339-213ENST00000642137 CYP4A22Q5TCH4 519 aa12.94□□□□□ -0.34
LINC00339-213ENST00000642137 SNX30Q5VWJ9 437 aa12.94□□□□□ -0.34
LINC00339-213ENST00000642137 PLEKHA7Q6IQ23 1121 aa12.94□□□□□ -0.34
LINC00339-213ENST00000642137 FAM183BPQ6ZVS7 135 aa12.94□□□□□ -0.34
LINC00339-213ENST00000642137 DNAAF5Q86Y56 855 aa12.94□□□□□ -0.34
LINC00339-213ENST00000642137 ARHGAP18Q8N392 663 aa12.94□□□□□ -0.34
LINC00339-213ENST00000642137 TXLNBQ8N3L3 684 aa12.94□□□□□ -0.34
LINC00339-213ENST00000642137 ZNF276Q8N554 614 aa12.94□□□□□ -0.34
LINC00339-213ENST00000642137 LEMD2Q8NC56 503 aa12.94□□□□□ -0.34
LINC00339-213ENST00000642137 FBXO32Q969P5 355 aa12.94□□□□□ -0.34
LINC00339-213ENST00000642137 ZNF707Q96C28 371 aaPredicted RBP12.94□□□□□ -0.34
LINC00339-213ENST00000642137 PABPC5Q96DU9 382 aaKnown RBP12.94□□□□□ -0.34
LINC00339-213ENST00000642137 SLITRK1Q96PX8 696 aa12.94□□□□□ -0.34
LINC00339-213ENST00000642137 AVENQ9NQS1 362 aaPredicted RBP12.94□□□□□ -0.34
LINC00339-213ENST00000642137 ASNSD1Q9NWL6 643 aa12.94□□□□□ -0.34
LINC00339-213ENST00000642137 DNMT3BQ9UBC3 853 aaKnown RBP12.94□□□□□ -0.34
LINC00339-213ENST00000642137 CNOT8Q9UFF9 292 aaKnown RBP12.94□□□□□ -0.34
LINC00339-213ENST00000642137 CHORDC1Q9UHD1 332 aaPredicted RBP12.94□□□□□ -0.34
LINC00339-213ENST00000642137 ADGRG1Q9Y653 693 aa12.94□□□□□ -0.34
LINC00339-213ENST00000642137 CHD9Q3L8U1 2897 aa12.94□□□□□ -0.34
LINC00339-213ENST00000642137 TCRBV5S1A1TA0A578 114 aa12.93□□□□□ -0.34
LINC00339-213ENST00000642137 SIGLEC16A6NMB1 481 aa12.93□□□□□ -0.34
LINC00339-213ENST00000642137 F11P03951 625 aa12.93□□□□□ -0.34
LINC00339-213ENST00000642137 CYP1A2P05177 515 aa12.93□□□□□ -0.34
LINC00339-213ENST00000642137 ZDHHC11BP0C7U3 371 aa12.93□□□□□ -0.34
LINC00339-213ENST00000642137 RRM1P23921 792 aa12.93□□□□□ -0.34
LINC00339-213ENST00000642137 PSEN1P49768 467 aa12.93□□□□□ -0.34
LINC00339-213ENST00000642137 EPHA5P54756 1037 aa12.93□□□□□ -0.34
LINC00339-213ENST00000642137 ITIH3Q06033 890 aa12.93□□□□□ -0.34
LINC00339-213ENST00000642137 IFRD2Q12894 506 aaPredicted RBP12.93□□□□□ -0.34
LINC00339-213ENST00000642137 C2CD6Q53TS8 623 aa12.93□□□□□ -0.34
LINC00339-213ENST00000642137 SYCE2Q6PIF2 218 aa12.93□□□□□ -0.34
LINC00339-213ENST00000642137 OLFML1Q6UWY5 402 aa12.93□□□□□ -0.34
LINC00339-213ENST00000642137 TOGARAM2Q6ZUX3 1019 aa12.93□□□□□ -0.34
LINC00339-213ENST00000642137 BEND5Q7L4P6 421 aa12.93□□□□□ -0.34
LINC00339-213ENST00000642137 ARCQ7LC44 396 aa12.93□□□□□ -0.34
LINC00339-213ENST00000642137 GPR149Q86SP6 731 aa12.93□□□□□ -0.34
LINC00339-213ENST00000642137 C12orf76Q8N812 135 aaPredicted RBP12.93□□□□□ -0.34
LINC00339-213ENST00000642137 C3orf20Q8ND61 904 aa12.93□□□□□ -0.34
LINC00339-213ENST00000642137 STKLD1Q8NE28 680 aa12.93□□□□□ -0.34
LINC00339-213ENST00000642137 ACRBPQ8NEB7 543 aa12.93□□□□□ -0.34
LINC00339-213ENST00000642137 PDZD8Q8NEN9 1154 aa12.93□□□□□ -0.34
LINC00339-213ENST00000642137 CLEC4CQ8WTT0 213 aa12.93□□□□□ -0.34
LINC00339-213ENST00000642137 CTNNBL1Q8WYA6 563 aaPredicted RBP12.93□□□□□ -0.34
LINC00339-213ENST00000642137 KHSRPQ92945 711 aaKnown RBP eCLIP12.93□□□□□ -0.34
LINC00339-213ENST00000642137 ZNF653Q96CK0 615 aa12.93□□□□□ -0.34
LINC00339-213ENST00000642137 PACSIN1Q9BY11 444 aa12.93□□□□□ -0.34
LINC00339-213ENST00000642137 THAP2Q9H0W7 228 aa12.93□□□□□ -0.34
LINC00339-213ENST00000642137 S1PR5Q9H228 398 aa12.93□□□□□ -0.34
LINC00339-213ENST00000642137 PIDD1Q9HB75 910 aa12.93□□□□□ -0.34
LINC00339-213ENST00000642137 MRPL47Q9HD33 250 aaKnown RBP12.93□□□□□ -0.34
LINC00339-213ENST00000642137 TLR8Q9NR97 1041 aaKnown RBP12.93□□□□□ -0.34
LINC00339-213ENST00000642137 PARVAQ9NVD7 372 aa12.93□□□□□ -0.34
LINC00339-213ENST00000642137 CLDND1Q9NY35 253 aa12.93□□□□□ -0.34
LINC00339-213ENST00000642137 TRPM5Q9NZQ8 1165 aa12.93□□□□□ -0.34
LINC00339-213ENST00000642137 CLEC1BQ9P126 229 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms