RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 CA14Q9ULX7 337 aa28.17■■■□□ 2.1
VEGFA-231ENST00000640499 FHOD1Q9Y613 1164 aa28.17■■■□□ 2.1
VEGFA-231ENST00000640499 SHISA7A6NL88 538 aa28.16■■■□□ 2.1
VEGFA-231ENST00000640499 FOXN3O00409 490 aaPredicted RBP28.16■■■□□ 2.1
VEGFA-231ENST00000640499 CYP26A1O43174 497 aa28.16■■■□□ 2.1
VEGFA-231ENST00000640499 PNMA6AP0CW24 399 aaPredicted RBP28.16■■■□□ 2.1
VEGFA-231ENST00000640499 GDI1P31150 447 aa28.16■■■□□ 2.1
VEGFA-231ENST00000640499 NFKBIBQ15653 356 aa28.16■■■□□ 2.1
VEGFA-231ENST00000640499 SCD5Q86SK9 330 aa28.16■■■□□ 2.1
VEGFA-231ENST00000640499 BPIFB1Q8TDL5 484 aa28.16■■■□□ 2.1
VEGFA-231ENST00000640499 SLC35F5Q8WV83 523 aa28.16■■■□□ 2.1
VEGFA-231ENST00000640499 ZFYVE19Q96K21 471 aa28.16■■■□□ 2.1
VEGFA-231ENST00000640499 FAM81BQ96LP2 452 aa28.16■■■□□ 2.1
VEGFA-231ENST00000640499 LSM14BQ9BX40 385 aaKnown RBP28.16■■■□□ 2.1
VEGFA-231ENST00000640499 FBXO44Q9H4M3 255 aa28.16■■■□□ 2.1
VEGFA-231ENST00000640499 SIK3Q9Y2K2 1263 aa28.16■■■□□ 2.1
VEGFA-231ENST00000640499 MYO16Q9Y6X6 1858 aa28.16■■■□□ 2.1
VEGFA-231ENST00000640499 LGALS16A8MUM7 142 aa28.15■■■□□ 2.1
VEGFA-231ENST00000640499 XPO1O14980 1071 aaKnown RBP28.15■■■□□ 2.1
VEGFA-231ENST00000640499 ABL1P00519 1130 aa28.15■■■□□ 2.1
VEGFA-231ENST00000640499 USP17L7P0C7H9 530 aa28.15■■■□□ 2.1
VEGFA-231ENST00000640499 BCAT1P54687 386 aa28.15■■■□□ 2.1
VEGFA-231ENST00000640499 BST2Q10589 180 aaKnown RBP28.15■■■□□ 2.1
VEGFA-231ENST00000640499 SIX5Q8N196 739 aa28.15■■■□□ 2.1
VEGFA-231ENST00000640499 PDZD8Q8NEN9 1154 aa28.15■■■□□ 2.1
VEGFA-231ENST00000640499 PBXIP1Q96AQ6 731 aa28.15■■■□□ 2.1
VEGFA-231ENST00000640499 GANQ9H2C0 597 aa28.15■■■□□ 2.1
VEGFA-231ENST00000640499 CCSER2Q9H7U1 834 aa28.15■■■□□ 2.1
VEGFA-231ENST00000640499 HELZP42694 1942 aaKnown RBP28.14■■■□□ 2.1
VEGFA-231ENST00000640499 EPHB6O15197 1021 aa28.14■■■□□ 2.1
VEGFA-231ENST00000640499 CKMP06732 381 aa28.14■■■□□ 2.1
VEGFA-231ENST00000640499 PFKLP17858 780 aa28.14■■■□□ 2.1
VEGFA-231ENST00000640499 SLC7A9P82251 487 aa28.14■■■□□ 2.1
VEGFA-231ENST00000640499 SLC44A4Q53GD3 710 aa28.14■■■□□ 2.1
VEGFA-231ENST00000640499 BHLHA9Q7RTU4 235 aa28.14■■■□□ 2.1
VEGFA-231ENST00000640499 ZNF606Q8WXB4 792 aa28.14■■■□□ 2.1
VEGFA-231ENST00000640499 CBX8Q9HC52 389 aa28.14■■■□□ 2.1
VEGFA-231ENST00000640499 PLCB1Q9NQ66 1216 aa28.14■■■□□ 2.1
VEGFA-231ENST00000640499 FBXL21Q9UKT6 434 aa28.14■■■□□ 2.1
VEGFA-231ENST00000640499 ARHGAP26Q9UNA1 814 aa28.14■■■□□ 2.1
VEGFA-231ENST00000640499 DPYSL4O14531 572 aa28.13■■■□□ 2.09
VEGFA-231ENST00000640499 COCHO43405 550 aa28.13■■■□□ 2.09
VEGFA-231ENST00000640499 UCHL3P15374 230 aa28.13■■■□□ 2.09
VEGFA-231ENST00000640499 CDK11BP21127 795 aaKnown RBP28.13■■■□□ 2.09
VEGFA-231ENST00000640499 CLCN1P35523 988 aa28.13■■■□□ 2.09
VEGFA-231ENST00000640499 PLA2G4AP47712 749 aa28.13■■■□□ 2.09
VEGFA-231ENST00000640499 ZNF77Q15935 545 aa28.13■■■□□ 2.09
VEGFA-231ENST00000640499 PMF1Q6P1K2 205 aa28.13■■■□□ 2.09
VEGFA-231ENST00000640499 CCDC186Q7Z3E2 898 aa28.13■■■□□ 2.09
VEGFA-231ENST00000640499 NDRG1Q92597 394 aaKnown RBP28.13■■■□□ 2.09
VEGFA-231ENST00000640499 SECISBP2LQ93073 1101 aaKnown RBP28.13■■■□□ 2.09
VEGFA-231ENST00000640499 BRD9Q9H8M2 597 aa28.13■■■□□ 2.09
VEGFA-231ENST00000640499 TRPV5Q9NQA5 729 aa28.13■■■□□ 2.09
VEGFA-231ENST00000640499 ARHGEF3Q9NR81 526 aa28.13■■■□□ 2.09
VEGFA-231ENST00000640499 HESX1Q9UBX0 185 aa28.13■■■□□ 2.09
VEGFA-231ENST00000640499 TICRRQ7Z2Z1 1910 aa28.13■■■□□ 2.09
VEGFA-231ENST00000640499 A0A1W2PQH9 124 aa28.12■■■□□ 2.09
VEGFA-231ENST00000640499 SMTNL1A8MU46 457 aa28.12■■■□□ 2.09
VEGFA-231ENST00000640499 ZNF263O14978 683 aa28.12■■■□□ 2.09
VEGFA-231ENST00000640499 CHADO15335 359 aa28.12■■■□□ 2.09
VEGFA-231ENST00000640499 USP8P40818 1118 aa28.12■■■□□ 2.09
VEGFA-231ENST00000640499 USP4Q13107 963 aa28.12■■■□□ 2.09
VEGFA-231ENST00000640499 DRAP1Q14919 205 aaPredicted RBP28.12■■■□□ 2.09
VEGFA-231ENST00000640499 CWF19L1Q69YN2 538 aaKnown RBP28.12■■■□□ 2.09
VEGFA-231ENST00000640499 DENND1BQ6P3S1 775 aa28.12■■■□□ 2.09
VEGFA-231ENST00000640499 FAM71AQ8IYT1 594 aa28.12■■■□□ 2.09
VEGFA-231ENST00000640499 KCTD13Q8WZ19 329 aa28.12■■■□□ 2.09
VEGFA-231ENST00000640499 ZFRQ96KR1 1074 aaKnown RBP28.12■■■□□ 2.09
VEGFA-231ENST00000640499 FAM83CQ9BQN1 747 aa28.12■■■□□ 2.09
VEGFA-231ENST00000640499 M0QYV0 167 aa28.11■■■□□ 2.09
VEGFA-231ENST00000640499 TBX18O95935 607 aa28.11■■■□□ 2.09
VEGFA-231ENST00000640499 TCF3P15923 654 aa28.11■■■□□ 2.09
VEGFA-231ENST00000640499 GPD2P43304 727 aa28.11■■■□□ 2.09
VEGFA-231ENST00000640499 TUBP50607 506 aa28.11■■■□□ 2.09
VEGFA-231ENST00000640499 TKTL1P51854 596 aa28.11■■■□□ 2.09
VEGFA-231ENST00000640499 PFKPQ01813 784 aa28.11■■■□□ 2.09
VEGFA-231ENST00000640499 STILQ15468 1287 aa28.11■■■□□ 2.09
VEGFA-231ENST00000640499 HECTD3Q5T447 861 aa28.11■■■□□ 2.09
VEGFA-231ENST00000640499 SMYD5Q6GMV2 418 aa28.11■■■□□ 2.09
VEGFA-231ENST00000640499 PM20D1Q6GTS8 502 aa28.11■■■□□ 2.09
VEGFA-231ENST00000640499 LUZP1Q86V48 1076 aa28.11■■■□□ 2.09
VEGFA-231ENST00000640499 SH3RF2Q8TEC5 729 aa28.11■■■□□ 2.09
VEGFA-231ENST00000640499 DNASE1L2Q92874 299 aa28.11■■■□□ 2.09
VEGFA-231ENST00000640499 IRF7Q92985 503 aa28.11■■■□□ 2.09
VEGFA-231ENST00000640499 KIF9Q9HAQ2 790 aa28.11■■■□□ 2.09
VEGFA-231ENST00000640499 TLR8Q9NR97 1041 aaKnown RBP28.11■■■□□ 2.09
VEGFA-231ENST00000640499 HEBP1Q9NRV9 189 aa28.11■■■□□ 2.09
VEGFA-231ENST00000640499 GKN1Q9NS71 199 aa28.11■■■□□ 2.09
VEGFA-231ENST00000640499 SETSIPP0DME0 302 aa28.1■■■□□ 2.09
VEGFA-231ENST00000640499 GNA15P30679 374 aa28.1■■■□□ 2.09
VEGFA-231ENST00000640499 TNK2Q07912 1038 aa28.1■■■□□ 2.09
VEGFA-231ENST00000640499 SYCP1Q15431 976 aa28.1■■■□□ 2.09
VEGFA-231ENST00000640499 MLF2Q15773 248 aaPredicted RBP28.1■■■□□ 2.09
VEGFA-231ENST00000640499 ARHGAP29Q52LW3 1261 aa28.1■■■□□ 2.09
VEGFA-231ENST00000640499 FKBP15Q5T1M5 1219 aa28.1■■■□□ 2.09
VEGFA-231ENST00000640499 YAF2Q8IY57 180 aa28.1■■■□□ 2.09
VEGFA-231ENST00000640499 FBXL6Q8N531 539 aa28.1■■■□□ 2.09
VEGFA-231ENST00000640499 DDX23Q9BUQ8 820 aaKnown RBP28.1■■■□□ 2.09
VEGFA-231ENST00000640499 ULBP1Q9BZM6 244 aa28.1■■■□□ 2.09
VEGFA-231ENST00000640499 CYLDQ9NQC7 956 aa28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms