RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 TAS2R1Q9NYW7 299 aa17.25■□□□□ 0.35
HNRNPU-228ENST00000640306 E7ESA3 106 aa17.25■□□□□ 0.35
HNRNPU-228ENST00000640306 APOC4-APOC2K7ER74 178 aa17.25■□□□□ 0.35
HNRNPU-228ENST00000640306 CAPN9O14815 690 aa17.25■□□□□ 0.35
HNRNPU-228ENST00000640306 KCNN4O15554 427 aa17.25■□□□□ 0.35
HNRNPU-228ENST00000640306 APOC2P02655 101 aa17.25■□□□□ 0.35
HNRNPU-228ENST00000640306 ENO1P06733 434 aaKnown RBP17.25■□□□□ 0.35
HNRNPU-228ENST00000640306 ABCD1P33897 745 aa17.25■□□□□ 0.35
HNRNPU-228ENST00000640306 CDK16Q00536 496 aa17.25■□□□□ 0.35
HNRNPU-228ENST00000640306 PTCD3Q96EY7 689 aaKnown RBP17.25■□□□□ 0.35
HNRNPU-228ENST00000640306 APOPT1Q96IL0 206 aa17.25■□□□□ 0.35
HNRNPU-228ENST00000640306 SRPK1Q96SB4 655 aaKnown RBP17.25■□□□□ 0.35
HNRNPU-228ENST00000640306 ADPGKQ9BRR6 497 aa17.25■□□□□ 0.35
HNRNPU-228ENST00000640306 TMEM134Q9H6X4 195 aa17.25■□□□□ 0.35
HNRNPU-228ENST00000640306 NRBP2Q9NSY0 501 aa17.25■□□□□ 0.35
HNRNPU-228ENST00000640306 KCNG1Q9UIX4 513 aa17.25■□□□□ 0.35
HNRNPU-228ENST00000640306 PCDHGC3Q9UN70 934 aa17.25■□□□□ 0.35
HNRNPU-228ENST00000640306 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.25■□□□□ 0.35
HNRNPU-228ENST00000640306 SPDYE5A6NIY4 337 aa17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 FCHO1O14526 889 aa17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 TRAFD1O14545 582 aaPredicted RBP17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 COPEO14579 308 aa17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 MAP3K13O43283 966 aa17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 LUC7L3O95232 432 aaKnown RBP17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 TNNC2P02585 160 aa17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 APRTP07741 180 aa17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 DLDP09622 509 aaKnown RBP17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 ETV4P43268 484 aa17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.24■□□□□ 0.353e-8■■□□□ 12.3
HNRNPU-228ENST00000640306 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 NRG4Q8WWG1 115 aa17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 ACAP3Q96P50 834 aa17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 DCLRE1BQ9H816 532 aa17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 PPCSQ9HAB8 311 aa17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 SAR1AQ9NR31 198 aa17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 CPSF3Q9UKF6 684 aaKnown RBP17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 FARP2O94887 1054 aaPredicted RBP17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 NFICP08651 508 aa17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 ATP6V1C1P21283 382 aa17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 RGS7P49802 495 aa17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 PRKD1Q15139 912 aaPredicted RBP17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 ZNF667Q5HYK9 610 aa17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 SNX30Q5VWJ9 437 aa17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 ENDOVQ8N8Q3 282 aaKnown RBP17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 SLC44A1Q8WWI5 657 aa17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 CLPTM1LQ96KA5 538 aa17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 R3HDMLQ9H3Y0 253 aa17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.24■□□□□ 0.351e-6■□□□□ 10.5
HNRNPU-228ENST00000640306 LNPEPQ9UIQ6 1025 aa17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 NR2E3Q9Y5X4 410 aa17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 CCDC189A1A4V9 331 aa17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 SPDYE16A6NNV3 312 aaPredicted RBP17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 H3BRJ5 948 aa17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 MICAL2O94851 1124 aa17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 TRUB2O95900 331 aaKnown RBP17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 ITGB3P05106 788 aa17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 CDH5P33151 784 aaPredicted RBP17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 KDSRQ06136 332 aa17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 RASA2Q15283 850 aa17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 CCDC62Q6P9F0 684 aa17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 ZPBP2Q6X784 338 aa17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 ZCCHC23Q6ZST2 131 aa17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 ARID3BQ8IVW6 561 aaPredicted RBP17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 PDCD7Q8N8D1 485 aaKnown RBP17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 ANKRD36BP1Q96IX9 119 aa17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 NIFKQ9BYG3 293 aaKnown RBP17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 SSU72Q9NP77 194 aaKnown RBP17.24■□□□□ 0.35
HNRNPU-228ENST00000640306 NVLO15381 856 aaKnown RBP17.23■□□□□ 0.35
HNRNPU-228ENST00000640306 NEK3P51956 506 aa17.23■□□□□ 0.35
HNRNPU-228ENST00000640306 TMPRSS15P98073 1019 aa17.23■□□□□ 0.35
HNRNPU-228ENST00000640306 THOC5Q13769 683 aaKnown RBP17.23■□□□□ 0.35
HNRNPU-228ENST00000640306 TARBP2Q15633 366 aaKnown RBP17.23■□□□□ 0.35
HNRNPU-228ENST00000640306 TSNAXIP1Q2TAA8 658 aa17.23■□□□□ 0.35
HNRNPU-228ENST00000640306 ZC3H12AQ5D1E8 599 aaKnown RBP17.23■□□□□ 0.35
HNRNPU-228ENST00000640306 CES4AQ5XG92 561 aa17.23■□□□□ 0.35
HNRNPU-228ENST00000640306 OR6B2Q6IFH4 312 aa17.23■□□□□ 0.35
HNRNPU-228ENST00000640306 TRNP1Q6NT89 227 aa17.23■□□□□ 0.35
HNRNPU-228ENST00000640306 LMNTD2Q8IXW0 634 aa17.23■□□□□ 0.35
HNRNPU-228ENST00000640306 SKA1Q96BD8 255 aa17.23■□□□□ 0.35
HNRNPU-228ENST00000640306 ALKBH8Q96BT7 664 aaKnown RBP17.23■□□□□ 0.35
HNRNPU-228ENST00000640306 OXNAD1Q96HP4 312 aaPredicted RBP17.23■□□□□ 0.35
HNRNPU-228ENST00000640306 HEXIM2Q96MH2 286 aaKnown RBP17.23■□□□□ 0.35
HNRNPU-228ENST00000640306 SYT15Q9BQS2 421 aa17.23■□□□□ 0.35
HNRNPU-228ENST00000640306 ELOVL4Q9GZR5 314 aa17.23■□□□□ 0.35
HNRNPU-228ENST00000640306 PPARGC1AQ9UBK2 798 aaKnown RBP17.23■□□□□ 0.35
HNRNPU-228ENST00000640306 CORO1CQ9ULV4 474 aaPredicted RBP17.23■□□□□ 0.35
HNRNPU-228ENST00000640306 MAD1L1Q9Y6D9 718 aa17.23■□□□□ 0.35
HNRNPU-228ENST00000640306 TEX264Q9Y6I9 313 aa17.23■□□□□ 0.35
HNRNPU-228ENST00000640306 WASF2Q9Y6W5 498 aa17.23■□□□□ 0.35
HNRNPU-228ENST00000640306 TBX10O75333 385 aa17.23■□□□□ 0.35
HNRNPU-228ENST00000640306 AMPD1P23109 780 aa17.23■□□□□ 0.35
HNRNPU-228ENST00000640306 RBL1P28749 1068 aa17.23■□□□□ 0.35
HNRNPU-228ENST00000640306 DLK2Q6UY11 383 aa17.23■□□□□ 0.35
HNRNPU-228ENST00000640306 PAXIP1Q6ZW49 1069 aaPredicted RBP17.23■□□□□ 0.35
HNRNPU-228ENST00000640306 CCDC110Q8TBZ0 833 aa17.23■□□□□ 0.35
HNRNPU-228ENST00000640306 FAM161BQ96MY7 647 aa17.23■□□□□ 0.35
HNRNPU-228ENST00000640306 SIX4Q9UIU6 781 aa17.23■□□□□ 0.35
HNRNPU-228ENST00000640306 PDGFRAP16234 1089 aa17.22■□□□□ 0.35
HNRNPU-228ENST00000640306 CLCN3P51790 818 aa17.22■□□□□ 0.35
HNRNPU-228ENST00000640306 MROH9Q5TGP6 573 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms