RNA–Protein interactions for RNA: ENST00000639324.1

SCARB2-217, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-217ENST00000639324 HOXB13Q92826 284 aaPredicted RBP6.47□□□□□ -1.37
SCARB2-217ENST00000639324 TIFAQ96CG3 184 aa6.47□□□□□ -1.37
SCARB2-217ENST00000639324 CDK5RAP3Q96JB5 506 aa6.47□□□□□ -1.37
SCARB2-217ENST00000639324 CGRRF1Q99675 332 aa6.47□□□□□ -1.37
SCARB2-217ENST00000639324 ZNF768Q9H5H4 540 aaKnown RBP6.47□□□□□ -1.37
SCARB2-217ENST00000639324 DDX20Q9UHI6 824 aaKnown RBP6.47□□□□□ -1.37
SCARB2-217ENST00000639324 RUVBL1Q9Y265 456 aaKnown RBP6.47□□□□□ -1.37
SCARB2-217ENST00000639324 PCDHB1Q9Y5F3 818 aa6.47□□□□□ -1.37
SCARB2-217ENST00000639324 MKI67P46013 3256 aaKnown RBP6.47□□□□□ -1.37
SCARB2-217ENST00000639324 UTYO14607 1347 aa6.47□□□□□ -1.37
SCARB2-217ENST00000639324 CEP290O15078 2479 aa6.47□□□□□ -1.37
SCARB2-217ENST00000639324 CCDC194A0A1B0GVG4 234 aa6.46□□□□□ -1.38
SCARB2-217ENST00000639324 TCP10L2B9ZVM9 353 aa6.46□□□□□ -1.38
SCARB2-217ENST00000639324 FAM227AF5H4B4 570 aa6.46□□□□□ -1.38
SCARB2-217ENST00000639324 H3BUI4 141 aa6.46□□□□□ -1.38
SCARB2-217ENST00000639324 CCER2I3L3R5 266 aa6.46□□□□□ -1.38
SCARB2-217ENST00000639324 EYA2O00167 538 aa6.46□□□□□ -1.38
SCARB2-217ENST00000639324 IPO8O15397 1037 aaKnown RBP6.46□□□□□ -1.38
SCARB2-217ENST00000639324 IPO13O94829 963 aaKnown RBP6.46□□□□□ -1.38
SCARB2-217ENST00000639324 UBXN7O94888 489 aa6.46□□□□□ -1.38
SCARB2-217ENST00000639324 ITGB1P05556 798 aa6.46□□□□□ -1.38
SCARB2-217ENST00000639324 GNAI3P08754 354 aa6.46□□□□□ -1.38
SCARB2-217ENST00000639324 HK1P19367 917 aa6.46□□□□□ -1.38
SCARB2-217ENST00000639324 DDCP20711 480 aa6.46□□□□□ -1.38
SCARB2-217ENST00000639324 HTR1BP28222 390 aa6.46□□□□□ -1.38
SCARB2-217ENST00000639324 SLC6A9P48067 706 aa6.46□□□□□ -1.38
SCARB2-217ENST00000639324 HNRNPA0Q13151 305 aaKnown RBP6.46□□□□□ -1.38
SCARB2-217ENST00000639324 GBX1Q14549 363 aa6.46□□□□□ -1.38
SCARB2-217ENST00000639324 LLGL1Q15334 1064 aa6.46□□□□□ -1.38
SCARB2-217ENST00000639324 RABL6Q3YEC7 729 aaPredicted RBP6.46□□□□□ -1.38
SCARB2-217ENST00000639324 KHDC1Q4VXA5 237 aaKnown RBP6.46□□□□□ -1.38
SCARB2-217ENST00000639324 LRRC24Q50LG9 513 aa6.46□□□□□ -1.38
SCARB2-217ENST00000639324 DCAF17Q5H9S7 520 aaPredicted RBP6.46□□□□□ -1.38
SCARB2-217ENST00000639324 LRRC55Q6ZSA7 311 aa6.46□□□□□ -1.38
SCARB2-217ENST00000639324 APBB1IPQ7Z5R6 666 aaPredicted RBP6.46□□□□□ -1.38
SCARB2-217ENST00000639324 PROKR1Q8TCW9 393 aa6.46□□□□□ -1.38
SCARB2-217ENST00000639324 NSUN6Q8TEA1 469 aaKnown RBP6.46□□□□□ -1.38
SCARB2-217ENST00000639324 VOPP1Q96AW1 172 aa6.46□□□□□ -1.38
SCARB2-217ENST00000639324 ERO1AQ96HE7 468 aa6.46□□□□□ -1.38
SCARB2-217ENST00000639324 CPEB1Q9BZB8 566 aaKnown RBP6.46□□□□□ -1.38
SCARB2-217ENST00000639324 PUS3Q9BZE2 481 aaKnown RBP6.46□□□□□ -1.38
SCARB2-217ENST00000639324 SIL1Q9H173 461 aa6.46□□□□□ -1.38
SCARB2-217ENST00000639324 TDRD3Q9H7E2 651 aaKnown RBP6.46□□□□□ -1.38
SCARB2-217ENST00000639324 LMBRD1Q9NUN5 540 aa6.46□□□□□ -1.38
SCARB2-217ENST00000639324 ZNF70Q9UC06 446 aaPredicted RBP6.46□□□□□ -1.38
SCARB2-217ENST00000639324 FEZ2Q9UHY8 353 aaPredicted RBP6.46□□□□□ -1.38
SCARB2-217ENST00000639324 SIK3Q9Y2K2 1263 aa6.46□□□□□ -1.38
SCARB2-217ENST00000639324 NR2E3Q9Y5X4 410 aa6.46□□□□□ -1.38
SCARB2-217ENST00000639324 FAM205AQ6ZU69 1335 aa6.46□□□□□ -1.38
SCARB2-217ENST00000639324 COL4A3Q01955 1670 aa6.45□□□□□ -1.38
SCARB2-217ENST00000639324 KIAA0100Q14667 2235 aaKnown RBP6.45□□□□□ -1.38
SCARB2-217ENST00000639324 PAPPA2Q9BXP8 1791 aa6.45□□□□□ -1.38
SCARB2-217ENST00000639324 LMNAP02545 664 aaKnown RBP6.45□□□□□ -1.38
SCARB2-217ENST00000639324 ALDH2P05091 517 aa6.45□□□□□ -1.38
SCARB2-217ENST00000639324 MAP2K6P52564 334 aa6.45□□□□□ -1.38
SCARB2-217ENST00000639324 TARDBPQ13148 414 aaKnown RBP eCLIP6.45□□□□□ -1.38
SCARB2-217ENST00000639324 SP140Q13342 867 aa6.45□□□□□ -1.38
SCARB2-217ENST00000639324 ARHGEF6Q15052 776 aa6.45□□□□□ -1.38
SCARB2-217ENST00000639324 SLC4A8Q2Y0W8 1093 aa6.45□□□□□ -1.38
SCARB2-217ENST00000639324 SRGAP1Q7Z6B7 1085 aa6.45□□□□□ -1.38
SCARB2-217ENST00000639324 ZGPATQ8N5A5 531 aaKnown RBP6.45□□□□□ -1.38
SCARB2-217ENST00000639324 SH2D3CQ8N5H7 860 aa6.45□□□□□ -1.38
SCARB2-217ENST00000639324 ANKRD44Q8N8A2 993 aa6.45□□□□□ -1.38
SCARB2-217ENST00000639324 KLHDC4Q8TBB5 520 aa6.45□□□□□ -1.38
SCARB2-217ENST00000639324 NTN5Q8WTR8 489 aaPredicted RBP6.45□□□□□ -1.38
SCARB2-217ENST00000639324 FRAT1Q92837 279 aaPredicted RBP6.45□□□□□ -1.38
SCARB2-217ENST00000639324 ZBED3Q96IU2 234 aaPredicted RBP6.45□□□□□ -1.38
SCARB2-217ENST00000639324 FAM84BQ96KN1 310 aaPredicted RBP6.45□□□□□ -1.38
SCARB2-217ENST00000639324 PRMT6Q96LA8 375 aaPredicted RBP6.45□□□□□ -1.38
SCARB2-217ENST00000639324 VRK1Q99986 396 aaPredicted RBP6.45□□□□□ -1.38
SCARB2-217ENST00000639324 USP44Q9H0E7 712 aa6.45□□□□□ -1.38
SCARB2-217ENST00000639324 PRO3102Q9H379 93 aa6.45□□□□□ -1.38
SCARB2-217ENST00000639324 ARMT1Q9H993 441 aa6.45□□□□□ -1.38
SCARB2-217ENST00000639324 SORCS3Q9UPU3 1222 aa6.45□□□□□ -1.38
SCARB2-217ENST00000639324 FAM50BQ9Y247 325 aa6.45□□□□□ -1.38
SCARB2-217ENST00000639324 RIPOR2Q9Y4F9 1068 aa6.45□□□□□ -1.38
SCARB2-217ENST00000639324 PCDHA3Q9Y5H8 950 aa6.45□□□□□ -1.38
SCARB2-217ENST00000639324 ACTL7AQ9Y615 435 aa6.45□□□□□ -1.38
SCARB2-217ENST00000639324 RBBP6Q7Z6E9 1792 aaKnown RBP6.44□□□□□ -1.38
SCARB2-217ENST00000639324 COL6A3P12111 3177 aa6.44□□□□□ -1.38
SCARB2-217ENST00000639324 LRRC14BA6NHZ5 514 aa6.44□□□□□ -1.38
SCARB2-217ENST00000639324 AHRRA9YTQ3 701 aa6.44□□□□□ -1.38
SCARB2-217ENST00000639324 HOXA3O43365 443 aaPredicted RBP6.44□□□□□ -1.38
SCARB2-217ENST00000639324 B3GALT2O43825 422 aa6.44□□□□□ -1.38
SCARB2-217ENST00000639324 CIAO1O76071 339 aa6.44□□□□□ -1.38
SCARB2-217ENST00000639324 GNAT2P19087 354 aa6.44□□□□□ -1.38
SCARB2-217ENST00000639324 PLA2G5P39877 138 aa6.44□□□□□ -1.38
SCARB2-217ENST00000639324 IL15P40933 162 aaPredicted RBP6.44□□□□□ -1.38
SCARB2-217ENST00000639324 FLT3LGP49771 235 aa6.44□□□□□ -1.38
SCARB2-217ENST00000639324 DSC2Q02487 901 aa6.44□□□□□ -1.38
SCARB2-217ENST00000639324 HDAC1Q13547 482 aaPredicted RBP6.44□□□□□ -1.38
SCARB2-217ENST00000639324 KIAA0753Q2KHM9 967 aa6.44□□□□□ -1.38
SCARB2-217ENST00000639324 GORABQ5T7V8 394 aa6.44□□□□□ -1.38
SCARB2-217ENST00000639324 HEATR3Q7Z4Q2 680 aa6.44□□□□□ -1.38
SCARB2-217ENST00000639324 DZIP1Q86YF9 867 aaKnown RBP6.44□□□□□ -1.38
SCARB2-217ENST00000639324 FTSJ3Q8IY81 847 aaKnown RBP6.44□□□□□ -1.38
SCARB2-217ENST00000639324 DEFB123Q8N688 67 aa6.44□□□□□ -1.38
SCARB2-217ENST00000639324 LILRA3Q8N6C8 439 aaPredicted RBP6.44□□□□□ -1.38
SCARB2-217ENST00000639324 CASKIN2Q8WXE0 1202 aa6.44□□□□□ -1.38
SCARB2-217ENST00000639324 FAM122AQ96E09 287 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms