RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 CLK4Q9HAZ1 481 aaKnown RBP12.48□□□□□ -0.41
CAPN3-221ENST00000638141 VTA1Q9NP79 307 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 SEL1LQ9UBV2 794 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 FRMD4BQ9Y2L6 1034 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 USP17L3A6NCW0 530 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 USP17L4A6NCW7 530 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 MCF2LO15068 1137 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 SIN3BO75182 1162 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 H6PDO95479 791 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 CYP19A1P11511 503 aaPredicted RBP12.48□□□□□ -0.41
CAPN3-221ENST00000638141 RPA1P27694 616 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 GSSP48637 474 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 TNNI2P48788 182 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 ERFP50548 548 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 COPAP53621 1224 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 EVX2Q03828 476 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 OASLQ15646 514 aaKnown RBP12.48□□□□□ -0.41
CAPN3-221ENST00000638141 MOGQ16653 247 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 DCAF6Q58WW2 860 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 C16orf87Q6PH81 154 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 USP17L1Q7RTZ2 530 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 FBXO33Q7Z6M2 555 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 DZIP1Q86YF9 867 aaKnown RBP12.48□□□□□ -0.41
CAPN3-221ENST00000638141 FBXW8Q8N3Y1 598 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 LMO3Q8TAP4 145 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 TMEM174Q8WUU8 243 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 DCAKDQ8WVC6 231 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 OTUD5Q96G74 571 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 PAFAH2Q99487 392 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 PAIP1Q9H074 479 aaKnown RBP12.48□□□□□ -0.41
CAPN3-221ENST00000638141 AVENQ9NQS1 362 aaPredicted RBP12.48□□□□□ -0.41
CAPN3-221ENST00000638141 NCKIPSDQ9NZQ3 722 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 RIMS3Q9UJD0 308 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 NOCTQ9UK39 431 aaKnown RBP12.48□□□□□ -0.41
CAPN3-221ENST00000638141 PCDHGB4Q9UN71 923 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 GNEQ9Y223 722 aaKnown RBP12.48□□□□□ -0.41
CAPN3-221ENST00000638141 PCDHGB5Q9Y5G0 923 aa12.48□□□□□ -0.41
CAPN3-221ENST00000638141 COL5A3P25940 1745 aaPredicted RBP12.48□□□□□ -0.41
CAPN3-221ENST00000638141 SCN4AP35499 1836 aa12.47□□□□□ -0.41
CAPN3-221ENST00000638141 ZNF831Q5JPB2 1677 aa12.47□□□□□ -0.41
CAPN3-221ENST00000638141 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.47□□□□□ -0.41
CAPN3-221ENST00000638141 XPOTO43592 962 aaKnown RBP12.47□□□□□ -0.41
CAPN3-221ENST00000638141 FBXO21O94952 628 aa12.47□□□□□ -0.41
CAPN3-221ENST00000638141 ZBTB11O95625 1053 aaPredicted RBP12.47□□□□□ -0.41
CAPN3-221ENST00000638141 MYL4P12829 197 aa12.47□□□□□ -0.41
CAPN3-221ENST00000638141 HOXD11P31277 338 aaPredicted RBP12.47□□□□□ -0.41
CAPN3-221ENST00000638141 CIITAP33076 1130 aa12.47□□□□□ -0.41
CAPN3-221ENST00000638141 HNRNPFP52597 415 aaKnown RBP12.47□□□□□ -0.41
CAPN3-221ENST00000638141 SLC5A3P53794 718 aa12.47□□□□□ -0.41
CAPN3-221ENST00000638141 STX3Q13277 289 aa12.47□□□□□ -0.41
CAPN3-221ENST00000638141 NANOGP8Q6NSW7 305 aa12.47□□□□□ -0.41
CAPN3-221ENST00000638141 TMEM214Q6NUQ4 689 aaKnown RBP12.47□□□□□ -0.41
CAPN3-221ENST00000638141 MIER3Q7Z3K6 550 aa12.47□□□□□ -0.41
CAPN3-221ENST00000638141 TRUB1Q8WWH5 349 aaKnown RBP12.47□□□□□ -0.41
CAPN3-221ENST00000638141 CCDC138Q96M89 665 aa12.47□□□□□ -0.41
CAPN3-221ENST00000638141 KLHL3Q9UH77 587 aa12.47□□□□□ -0.41
CAPN3-221ENST00000638141 IQANK1A0A1B0GTG1 560 aa12.47□□□□□ -0.41
CAPN3-221ENST00000638141 H3BNH8 94 aa12.47□□□□□ -0.41
CAPN3-221ENST00000638141 PSTPIP1O43586 416 aa12.47□□□□□ -0.41
CAPN3-221ENST00000638141 MED24O75448 989 aa12.47□□□□□ -0.41
CAPN3-221ENST00000638141 TFPTP0C1Z6 253 aa12.47□□□□□ -0.41
CAPN3-221ENST00000638141 PSMC3P17980 439 aa12.47□□□□□ -0.41
CAPN3-221ENST00000638141 TTKP33981 857 aa12.47□□□□□ -0.41
CAPN3-221ENST00000638141 CRKLP46109 303 aaKnown RBP12.47□□□□□ -0.41
CAPN3-221ENST00000638141 GYG1P46976 350 aa12.47□□□□□ -0.41
CAPN3-221ENST00000638141 GPX6P59796 221 aa12.47□□□□□ -0.41
CAPN3-221ENST00000638141 SLC25A3Q00325 362 aa12.47□□□□□ -0.41
CAPN3-221ENST00000638141 CACNB1Q02641 598 aaPredicted RBP12.47□□□□□ -0.41
CAPN3-221ENST00000638141 FASTKD3Q14CZ7 662 aaKnown RBP12.47□□□□□ -0.41
CAPN3-221ENST00000638141 SPCS2Q15005 226 aa12.47□□□□□ -0.41
CAPN3-221ENST00000638141 RGS21Q2M5E4 152 aa12.47□□□□□ -0.41
CAPN3-221ENST00000638141 ZBED5Q49AG3 693 aa12.47□□□□□ -0.41
CAPN3-221ENST00000638141 AMIGO3Q86WK7 504 aa12.47□□□□□ -0.41
CAPN3-221ENST00000638141 TBC1D15Q8TC07 691 aa12.47□□□□□ -0.41
CAPN3-221ENST00000638141 ISOC1Q96CN7 298 aa12.47□□□□□ -0.41
CAPN3-221ENST00000638141 TRIM11Q96F44 468 aa12.47□□□□□ -0.41
CAPN3-221ENST00000638141 SH3GL1Q99961 368 aa12.47□□□□□ -0.41
CAPN3-221ENST00000638141 HERPUD2Q9BSE4 406 aa12.47□□□□□ -0.41
CAPN3-221ENST00000638141 PSTPIP2Q9H939 334 aa12.47□□□□□ -0.41
CAPN3-221ENST00000638141 MAN1C1Q9NR34 630 aa12.47□□□□□ -0.41
CAPN3-221ENST00000638141 SIRPGQ9P1W8 387 aa12.47□□□□□ -0.41
CAPN3-221ENST00000638141 BCAP29Q9UHQ4 241 aa12.47□□□□□ -0.41
CAPN3-221ENST00000638141 ERGIC3Q9Y282 383 aa12.47□□□□□ -0.41
CAPN3-221ENST00000638141 ZNF652Q9Y2D9 606 aa12.47□□□□□ -0.41
CAPN3-221ENST00000638141 SLC30A1Q9Y6M5 507 aa12.47□□□□□ -0.41
CAPN3-221ENST00000638141 SNED1Q8TER0 1413 aa12.46□□□□□ -0.41
CAPN3-221ENST00000638141 DENND3A2RUS2 1198 aa12.46□□□□□ -0.41
CAPN3-221ENST00000638141 GCNT3O95395 438 aa12.46□□□□□ -0.41
CAPN3-221ENST00000638141 MT-ND3P03897 115 aa12.46□□□□□ -0.41
CAPN3-221ENST00000638141 USP17L8P0C7I0 530 aa12.46□□□□□ -0.41
CAPN3-221ENST00000638141 EEF2P13639 858 aaKnown RBP12.46□□□□□ -0.41
CAPN3-221ENST00000638141 DLG4P78352 724 aa12.46□□□□□ -0.41
CAPN3-221ENST00000638141 ARHGAP44Q17R89 818 aa12.46□□□□□ -0.41
CAPN3-221ENST00000638141 CBWD6Q4V339 395 aa12.46□□□□□ -0.41
CAPN3-221ENST00000638141 TEX44Q53QW1 395 aa12.46□□□□□ -0.41
CAPN3-221ENST00000638141 CBWD3Q5JTY5 395 aa12.46□□□□□ -0.41
CAPN3-221ENST00000638141 CBWD5Q5RIA9 395 aa12.46□□□□□ -0.41
CAPN3-221ENST00000638141 PAOXQ6QHF9 649 aa12.46□□□□□ -0.41
CAPN3-221ENST00000638141 FRA10AC1Q70Z53 315 aa12.46□□□□□ -0.41
CAPN3-221ENST00000638141 FASTKD5Q7L8L6 764 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms