RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 GCAP28676 217 aa22.47■■□□□ 1.19
CLN6-224ENST00000638076 ADORA2BP29275 332 aa22.47■■□□□ 1.19
CLN6-224ENST00000638076 TFDP2Q14188 446 aa22.47■■□□□ 1.19
CLN6-224ENST00000638076 NOMO1Q15155 1222 aa22.47■■□□□ 1.19
CLN6-224ENST00000638076 BOLA3Q53S33 107 aa22.47■■□□□ 1.19
CLN6-224ENST00000638076 UBXN11Q5T124 520 aa22.47■■□□□ 1.19
CLN6-224ENST00000638076 ANKMY2Q8IV38 441 aa22.47■■□□□ 1.19
CLN6-224ENST00000638076 MAP7D3Q8IWC1 876 aa22.47■■□□□ 1.19
CLN6-224ENST00000638076 RIBC1Q8N443 379 aaPredicted RBP22.47■■□□□ 1.19
CLN6-224ENST00000638076 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.47■■□□□ 1.19
CLN6-224ENST00000638076 STK32AQ8WU08 396 aa22.47■■□□□ 1.19
CLN6-224ENST00000638076 RNF157Q96PX1 679 aa22.47■■□□□ 1.19
CLN6-224ENST00000638076 AP5M1Q9H0R1 490 aa22.47■■□□□ 1.19
CLN6-224ENST00000638076 GOLGA2P5Q9HBQ8 144 aa22.47■■□□□ 1.19
CLN6-224ENST00000638076 VIMP08670 466 aaKnown RBP22.47■■□□□ 1.19
CLN6-224ENST00000638076 RDXP35241 583 aaKnown RBP22.47■■□□□ 1.19
CLN6-224ENST00000638076 GNL1P36915 607 aaPredicted RBP22.47■■□□□ 1.19
CLN6-224ENST00000638076 NRLP54845 237 aa22.47■■□□□ 1.19
CLN6-224ENST00000638076 SNX16P57768 344 aa22.47■■□□□ 1.19
CLN6-224ENST00000638076 MPP2Q14168 576 aa22.47■■□□□ 1.19
CLN6-224ENST00000638076 ZC3H12AQ5D1E8 599 aaKnown RBP22.47■■□□□ 1.19
CLN6-224ENST00000638076 FAM47CQ5HY64 1035 aa22.47■■□□□ 1.19
CLN6-224ENST00000638076 ZNF618Q5T7W0 954 aa22.47■■□□□ 1.19
CLN6-224ENST00000638076 DARS2Q6PI48 645 aaKnown RBP22.47■■□□□ 1.19
CLN6-224ENST00000638076 ZNF560Q96MR9 790 aa22.47■■□□□ 1.19
CLN6-224ENST00000638076 MLXIPLQ9NP71 852 aa22.47■■□□□ 1.19
CLN6-224ENST00000638076 C17orf102A2RUQ5 167 aa22.46■■□□□ 1.19
CLN6-224ENST00000638076 POC1B-GALNT4F8VUJ3 575 aa22.46■■□□□ 1.19
CLN6-224ENST00000638076 ARL4CP56559 192 aa22.46■■□□□ 1.19
CLN6-224ENST00000638076 ROR1Q01973 937 aa22.46■■□□□ 1.19
CLN6-224ENST00000638076 ADCY1Q08828 1119 aa22.46■■□□□ 1.19
CLN6-224ENST00000638076 PDK2Q15119 407 aa22.46■■□□□ 1.19
CLN6-224ENST00000638076 FNBP1LQ5T0N5 605 aa22.46■■□□□ 1.19
CLN6-224ENST00000638076 TAX1BP1Q86VP1 789 aa22.46■■□□□ 1.19
CLN6-224ENST00000638076 CLEC4CQ8WTT0 213 aa22.46■■□□□ 1.19
CLN6-224ENST00000638076 PPM1EQ8WY54 764 aa22.46■■□□□ 1.19
CLN6-224ENST00000638076 MAML1Q92585 1016 aa22.46■■□□□ 1.19
CLN6-224ENST00000638076 USP6NLQ92738 828 aa22.46■■□□□ 1.19
CLN6-224ENST00000638076 TCRBV7S3A2A0A539 114 aa22.46■■□□□ 1.19
CLN6-224ENST00000638076 RASA4BC9J798 803 aa22.46■■□□□ 1.19
CLN6-224ENST00000638076 RASA4O43374 803 aa22.46■■□□□ 1.19
CLN6-224ENST00000638076 KCNE1P15382 129 aa22.46■■□□□ 1.19
CLN6-224ENST00000638076 IL4RP24394 825 aa22.46■■□□□ 1.19
CLN6-224ENST00000638076 SOX4Q06945 474 aaPredicted RBP22.46■■□□□ 1.19
CLN6-224ENST00000638076 BST2Q10589 180 aaKnown RBP22.46■■□□□ 1.19
CLN6-224ENST00000638076 XKR4Q5GH76 650 aa22.46■■□□□ 1.19
CLN6-224ENST00000638076 C1orf228Q6PIY5 440 aa22.46■■□□□ 1.19
CLN6-224ENST00000638076 ZDHHC17Q8IUH5 632 aa22.46■■□□□ 1.19
CLN6-224ENST00000638076 CRYBG2Q8N1P7 616 aa22.46■■□□□ 1.19
CLN6-224ENST00000638076 IPPQ9Y573 584 aa22.46■■□□□ 1.19
CLN6-224ENST00000638076 ACTL7BQ9Y614 415 aa22.46■■□□□ 1.19
CLN6-224ENST00000638076 TRIP12Q14669 1992 aaPredicted RBP22.45■■□□□ 1.18
CLN6-224ENST00000638076 XPOTO43592 962 aaKnown RBP22.45■■□□□ 1.18
CLN6-224ENST00000638076 DESP17661 470 aa22.45■■□□□ 1.18
CLN6-224ENST00000638076 CRYBB1P53674 252 aaPredicted RBP22.45■■□□□ 1.18
CLN6-224ENST00000638076 BCAT1P54687 386 aa22.45■■□□□ 1.18
CLN6-224ENST00000638076 BASP1P80723 227 aaKnown RBP22.45■■□□□ 1.18
CLN6-224ENST00000638076 MSS51Q4VC12 460 aa22.45■■□□□ 1.18
CLN6-224ENST00000638076 MICALL1Q8N3F8 863 aa22.45■■□□□ 1.18
CLN6-224ENST00000638076 ANKRD52Q8NB46 1076 aa22.45■■□□□ 1.18
CLN6-224ENST00000638076 TEKT4Q8WW24 435 aa22.45■■□□□ 1.18
CLN6-224ENST00000638076 SNRNP25Q9BV90 132 aaKnown RBP22.45■■□□□ 1.18
CLN6-224ENST00000638076 SNX25Q9H3E2 840 aa22.45■■□□□ 1.18
CLN6-224ENST00000638076 GDAP2Q9NXN4 497 aa22.45■■□□□ 1.18
CLN6-224ENST00000638076 STIP1P31948 543 aaKnown RBP22.45■■□□□ 1.18
CLN6-224ENST00000638076 PNPLA4P41247 253 aa22.45■■□□□ 1.18
CLN6-224ENST00000638076 TAF6P49848 677 aa22.45■■□□□ 1.18
CLN6-224ENST00000638076 CA9Q16790 459 aa22.45■■□□□ 1.18
CLN6-224ENST00000638076 TDRPQ86YL5 185 aa22.45■■□□□ 1.18
CLN6-224ENST00000638076 APPL2Q8NEU8 664 aa22.45■■□□□ 1.18
CLN6-224ENST00000638076 KATNAL1Q9BW62 490 aa22.45■■□□□ 1.18
CLN6-224ENST00000638076 PCDH18Q9HCL0 1135 aa22.45■■□□□ 1.18
CLN6-224ENST00000638076 TMEM63AO94886 807 aa22.44■■□□□ 1.18
CLN6-224ENST00000638076 LCP1P13796 627 aa22.44■■□□□ 1.18
CLN6-224ENST00000638076 TFE3P19532 575 aaPredicted RBP22.44■■□□□ 1.18
CLN6-224ENST00000638076 ZNF157P51786 506 aaPredicted RBP22.44■■□□□ 1.18
CLN6-224ENST00000638076 HDAC4P56524 1084 aa22.44■■□□□ 1.18
CLN6-224ENST00000638076 GPX6P59796 221 aa22.44■■□□□ 1.18
CLN6-224ENST00000638076 ANKRD20A8PQ5CZ79 823 aa22.44■■□□□ 1.18
CLN6-224ENST00000638076 CCDC121Q6ZUS5 278 aa22.44■■□□□ 1.18
CLN6-224ENST00000638076 PLD5Q8N7P1 536 aa22.44■■□□□ 1.18
CLN6-224ENST00000638076 ARRDC4Q8NCT1 418 aa22.44■■□□□ 1.18
CLN6-224ENST00000638076 SMG8Q8ND04 991 aaKnown RBP22.44■■□□□ 1.18
CLN6-224ENST00000638076 PYROXD1Q8WU10 500 aa22.44■■□□□ 1.18
CLN6-224ENST00000638076 TBCBQ99426 244 aa22.44■■□□□ 1.18
CLN6-224ENST00000638076 PHACTR1Q9C0D0 580 aa22.44■■□□□ 1.18
CLN6-224ENST00000638076 H7C0C1 242 aa22.43■■□□□ 1.18
CLN6-224ENST00000638076 ATP5OP48047 213 aa22.43■■□□□ 1.18
CLN6-224ENST00000638076 FSCN1Q16658 493 aaKnown RBP22.43■■□□□ 1.18
CLN6-224ENST00000638076 PIGWQ7Z7B1 504 aa22.43■■□□□ 1.18
CLN6-224ENST00000638076 RASAL3Q86YV0 1011 aa22.43■■□□□ 1.18
CLN6-224ENST00000638076 CCDC197Q8NCU1 140 aa22.43■■□□□ 1.18
CLN6-224ENST00000638076 GDAP1Q8TB36 358 aa22.43■■□□□ 1.18
CLN6-224ENST00000638076 XPO7Q9UIA9 1087 aaKnown RBP22.43■■□□□ 1.18
CLN6-224ENST00000638076 Q9Y3F1 56 aa22.43■■□□□ 1.18
CLN6-224ENST00000638076 RGS2P41220 211 aa22.43■■□□□ 1.18
CLN6-224ENST00000638076 SF3A3Q12874 501 aaKnown RBP eCLIP22.43■■□□□ 1.18
CLN6-224ENST00000638076 MTM1Q13496 603 aa22.43■■□□□ 1.18
CLN6-224ENST00000638076 PQLC3Q8N755 202 aa22.43■■□□□ 1.18
CLN6-224ENST00000638076 SLC2A14Q8TDB8 520 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms