RNA–Protein interactions for RNA: ENST00000637981.1

CACNA1A-256, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,346 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-256	ENST00000637981	KIF9	Q9HAQ2	790 aa		10.08	□□□□□ -0.8
CACNA1A-256	ENST00000637981	TMEM8A	Q9HCN3	771 aa		10.08	□□□□□ -0.8
CACNA1A-256	ENST00000637981	TDP1	Q9NUW8	608 aa		10.08	□□□□□ -0.8
CACNA1A-256	ENST00000637981	ABI2	Q9NYB9	513 aa	Predicted RBP	10.08	□□□□□ -0.8
CACNA1A-256	ENST00000637981	DSE	Q9UL01	958 aa		10.08	□□□□□ -0.8
CACNA1A-256	ENST00000637981	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	10.08	□□□□□ -0.8
CACNA1A-256	ENST00000637981	LNP1	A1A4G5	178 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	ANO9	A1A5B4	782 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	BCLAF3	A2AJT9	711 aa	Known RBP	10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	PIR	O00625	290 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	APBB3	O95704	486 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	F11	P03951	625 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	ITGB3	P05106	788 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	HAPLN1	P10915	354 aa	Predicted RBP	10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	P4HA1	P13674	534 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	SPINK2	P20155	84 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	GBP1	P32455	592 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	TAF6	P49848	677 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	MXI1	P50539	228 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	SMARCB1	Q12824	385 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	DMC1	Q14565	340 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	ZACN	Q401N2	412 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	SH3PXD2A	Q5TCZ1	1133 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	TXNDC8	Q6A555	127 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	SYT13	Q7L8C5	426 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	LRRTM3	Q86VH5	581 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	TRIM59	Q8IWR1	403 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	THEM5	Q8N1Q8	247 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	AOPEP	Q8N6M6	819 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	KDF1	Q8NAX2	398 aa	Predicted RBP	10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	RIN3	Q8TB24	985 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	SPPL2B	Q8TCT7	592 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	TAF4B	Q92750	862 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	EXOC4	Q96A65	974 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	EBF1	Q9UH73	591 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	MAGED2	Q9UNF1	606 aa	Predicted RBP	10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	AGAP1	Q9UPQ3	857 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	ATG2B	Q96BY7	2078 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	CNOT1	A5YKK6	2376 aa	Known RBP	10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	KCNJ18	B7U540	433 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	CYB561D2	O14569	222 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	KHNYN	O15037	678 aa	Known RBP	10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	PMM2	O15305	246 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	CLSTN1	O94985	981 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	AFP	P02771	609 aa	Known RBP	10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	C4BPA	P04003	597 aa	Known RBP	10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	TRIM49	P0CI25	452 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	TRIM49C	P0CI26	452 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	HOXB3	P14651	431 aa	Predicted RBP	10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	HMGA1	P17096	107 aa	Known RBP	10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	POLR2B	P30876	1174 aa	Known RBP	10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	GJA4	P35212	333 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	GCLM	P48507	274 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	DGKE	P52429	567 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	DLG4	P78352	724 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	NCOA4	Q13772	614 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	KCNJ12	Q14500	433 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	PDGFRL	Q15198	375 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	MAN2A1	Q16706	1144 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	SGSM1	Q2NKQ1	1148 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	TCP11X2	Q5H9J9	407 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	WSCD1	Q658N2	575 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	LMBRD2	Q68DH5	695 aa	Predicted RBP	10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	SV2A	Q7L0J3	742 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	CPA6	Q8N4T0	437 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	C1orf127	Q8N9H9	656 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	STKLD1	Q8NE28	680 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	FBXL13	Q8NEE6	735 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	TTC16	Q8NEE8	873 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	OR5B17	Q8NGF7	314 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	MRPS31	Q92665	395 aa	Known RBP	10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	CD101	Q93033	1021 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	SLC35C1	Q96A29	364 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	ACD	Q96AP0	544 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	FAXDC2	Q96IV6	333 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	MED15	Q96RN5	788 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	TUBGCP2	Q9BSJ2	902 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	ADAM33	Q9BZ11	813 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	ECT2	Q9H8V3	914 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	SAMSN1	Q9NSI8	373 aa	Known RBP	10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	FANCL	Q9NW38	375 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	WASF3	Q9UPY6	502 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	INVS	Q9Y283	1065 aa		10.07	□□□□□ -0.8
CACNA1A-256	ENST00000637981	FRY	Q5TBA9	3013 aa		10.06	□□□□□ -0.8
CACNA1A-256	ENST00000637981	TMEM8B	A6NDV4	472 aa		10.06	□□□□□ -0.8
CACNA1A-256	ENST00000637981	SOBP	A7XYQ1	873 aa		10.06	□□□□□ -0.8
CACNA1A-256	ENST00000637981	KPNA7	A9QM74	516 aa		10.06	□□□□□ -0.8
CACNA1A-256	ENST00000637981	HUS1	O60921	280 aa		10.06	□□□□□ -0.8
CACNA1A-256	ENST00000637981	STAU1	O95793	577 aa	Known RBP	10.06	□□□□□ -0.8
CACNA1A-256	ENST00000637981	TOP3B	O95985	862 aa	Known RBP	10.06	□□□□□ -0.8
CACNA1A-256	ENST00000637981	CSH1	P0DML2	217 aa		10.06	□□□□□ -0.8
CACNA1A-256	ENST00000637981	CSH2	P0DML3	217 aa		10.06	□□□□□ -0.8
CACNA1A-256	ENST00000637981	CEACAM1	P13688	526 aa		10.06	□□□□□ -0.8
CACNA1A-256	ENST00000637981	TRIM21	P19474	475 aa	Known RBP	10.06	□□□□□ -0.8
CACNA1A-256	ENST00000637981	PIK3CA	P42336	1068 aa		10.06	□□□□□ -0.8
CACNA1A-256	ENST00000637981	FMO5	P49326	533 aa		10.06	□□□□□ -0.8
CACNA1A-256	ENST00000637981	GPR15	P49685	360 aa		10.06	□□□□□ -0.8
CACNA1A-256	ENST00000637981	WNT7B	P56706	349 aa		10.06	□□□□□ -0.8
CACNA1A-256	ENST00000637981	KCNH2	Q12809	1159 aa		10.06	□□□□□ -0.8
CACNA1A-256	ENST00000637981	ZNF268	Q14587	947 aa	Predicted RBP	10.06	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms