RNA–Protein interactions for RNA: ENST00000637686.1

CLN3-261, Transcript of CLN3, battenin, humanhuman

TSL 5

Gene CLN3, Length 533 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-261ENST00000637686 MYH10P35580 1976 aa10.41□□□□□ -0.74
CLN3-261ENST00000637686 DENND4CQ5VZ89 1909 aa10.41□□□□□ -0.74
CLN3-261ENST00000637686 NCANO14594 1321 aa10.41□□□□□ -0.74
CLN3-261ENST00000637686 C2orf78A6NCI8 922 aa10.41□□□□□ -0.74
CLN3-261ENST00000637686 ZNF840PA6NDX5 716 aa10.41□□□□□ -0.74
CLN3-261ENST00000637686 HEPACAM2A8MVW5 462 aa10.41□□□□□ -0.74
CLN3-261ENST00000637686 GPR37L1O60883 481 aa10.41□□□□□ -0.74
CLN3-261ENST00000637686 RTN3O95197 1032 aaPredicted RBP10.41□□□□□ -0.74
CLN3-261ENST00000637686 ABL1P00519 1130 aa10.41□□□□□ -0.74
CLN3-261ENST00000637686 CALCAP01258 141 aa10.41□□□□□ -0.74
CLN3-261ENST00000637686 VDRP11473 427 aa10.41□□□□□ -0.74
CLN3-261ENST00000637686 KRT5P13647 590 aa10.41□□□□□ -0.74
CLN3-261ENST00000637686 NPR3P17342 541 aa10.41□□□□□ -0.74
CLN3-261ENST00000637686 WEE1P30291 646 aa10.41□□□□□ -0.74
CLN3-261ENST00000637686 CASP14P31944 242 aa10.41□□□□□ -0.74
CLN3-261ENST00000637686 PRKCIP41743 596 aa10.41□□□□□ -0.74
CLN3-261ENST00000637686 MFAP3P55082 362 aa10.41□□□□□ -0.74
CLN3-261ENST00000637686 TAF10Q12962 218 aa10.41□□□□□ -0.74
CLN3-261ENST00000637686 GRM2Q14416 872 aa10.41□□□□□ -0.74
CLN3-261ENST00000637686 SGO2Q562F6 1265 aa10.41□□□□□ -0.74
CLN3-261ENST00000637686 VITQ6UXI7 678 aa10.41□□□□□ -0.74
CLN3-261ENST00000637686 MON1AQ86VX9 555 aa10.41□□□□□ -0.74
CLN3-261ENST00000637686 LRRC8AQ8IWT6 810 aa10.41□□□□□ -0.74
CLN3-261ENST00000637686 CMTM8Q8IZV2 173 aa10.41□□□□□ -0.74
CLN3-261ENST00000637686 ARL14EPQ8N8R7 260 aaPredicted RBP10.41□□□□□ -0.74
CLN3-261ENST00000637686 RBBP8NLQ8NC74 664 aaPredicted RBP10.41□□□□□ -0.74
CLN3-261ENST00000637686 TFAP2BQ92481 460 aa10.41□□□□□ -0.74
CLN3-261ENST00000637686 RSPRY1Q96DX4 576 aa10.41□□□□□ -0.74
CLN3-261ENST00000637686 ASIC4Q96FT7 647 aa10.41□□□□□ -0.74
CLN3-261ENST00000637686 SLITRK1Q96PX8 696 aa10.41□□□□□ -0.74
CLN3-261ENST00000637686 ABHD10Q9NUJ1 306 aa10.41□□□□□ -0.74
CLN3-261ENST00000637686 COMMD8Q9NX08 183 aa10.41□□□□□ -0.74
CLN3-261ENST00000637686 IL37Q9NZH6 218 aa10.41□□□□□ -0.74
CLN3-261ENST00000637686 AIPL1Q9NZN9 384 aa10.41□□□□□ -0.74
CLN3-261ENST00000637686 TRPM5Q9NZQ8 1165 aa10.41□□□□□ -0.74
CLN3-261ENST00000637686 CHORDC1Q9UHD1 332 aaPredicted RBP10.41□□□□□ -0.74
CLN3-261ENST00000637686 FBXL21Q9UKT6 434 aa10.41□□□□□ -0.74
CLN3-261ENST00000637686 BZW2Q9Y6E2 419 aaKnown RBP10.41□□□□□ -0.74
CLN3-261ENST00000637686 TRIOO75962 3097 aa10.4□□□□□ -0.74
CLN3-261ENST00000637686 TRAV19A0A0A6YYK7 116 aa10.4□□□□□ -0.74
CLN3-261ENST00000637686 SOBPA7XYQ1 873 aa10.4□□□□□ -0.74
CLN3-261ENST00000637686 HHLA1C9JL84 531 aa10.4□□□□□ -0.74
CLN3-261ENST00000637686 DPYSL4O14531 572 aa10.4□□□□□ -0.74
CLN3-261ENST00000637686 EPHB6O15197 1021 aa10.4□□□□□ -0.74
CLN3-261ENST00000637686 PRAMEF12O95522 483 aa10.4□□□□□ -0.74
CLN3-261ENST00000637686 PAEPP09466 180 aa10.4□□□□□ -0.74
CLN3-261ENST00000637686 FERP16591 822 aa10.4□□□□□ -0.74
CLN3-261ENST00000637686 HDCP19113 662 aa10.4□□□□□ -0.74
CLN3-261ENST00000637686 AVPR1AP37288 418 aa10.4□□□□□ -0.74
CLN3-261ENST00000637686 PPP3CCP48454 512 aa10.4□□□□□ -0.74
CLN3-261ENST00000637686 KLK7P49862 253 aa10.4□□□□□ -0.74
CLN3-261ENST00000637686 ZNF132P52740 706 aa10.4□□□□□ -0.74
CLN3-261ENST00000637686 POLR2FP61218 127 aaKnown RBP10.4□□□□□ -0.74
CLN3-261ENST00000637686 ARHGAP44Q17R89 818 aa10.4□□□□□ -0.74
CLN3-261ENST00000637686 GOLGA7BQ2TAP0 167 aa10.4□□□□□ -0.74
CLN3-261ENST00000637686 GPRIN1Q7Z2K8 1008 aa10.4□□□□□ -0.74
CLN3-261ENST00000637686 TTC30AQ86WT1 665 aa10.4□□□□□ -0.74
CLN3-261ENST00000637686 TMTC1Q8IUR5 882 aa10.4□□□□□ -0.74
CLN3-261ENST00000637686 MFSD6LQ8IWD5 586 aa10.4□□□□□ -0.74
CLN3-261ENST00000637686 ANKRD52Q8NB46 1076 aa10.4□□□□□ -0.74
CLN3-261ENST00000637686 UBA3Q8TBC4 463 aa10.4□□□□□ -0.74
CLN3-261ENST00000637686 SHC3Q92529 594 aa10.4□□□□□ -0.74
CLN3-261ENST00000637686 USP13Q92995 863 aaPredicted RBP10.4□□□□□ -0.74
CLN3-261ENST00000637686 PBXIP1Q96AQ6 731 aa10.4□□□□□ -0.74
CLN3-261ENST00000637686 E2F7Q96AV8 911 aa10.4□□□□□ -0.74
CLN3-261ENST00000637686 LRRC3BQ96PB8 259 aa10.4□□□□□ -0.74
CLN3-261ENST00000637686 SPAG5Q96R06 1193 aa10.4□□□□□ -0.74
CLN3-261ENST00000637686 SLC22A12Q96S37 553 aa10.4□□□□□ -0.74
CLN3-261ENST00000637686 CYP2S1Q96SQ9 504 aa10.4□□□□□ -0.74
CLN3-261ENST00000637686 ZSWIM1Q9BR11 485 aa10.4□□□□□ -0.74
CLN3-261ENST00000637686 LRFN3Q9BTN0 628 aa10.4□□□□□ -0.74
CLN3-261ENST00000637686 TRMT61BQ9BVS5 477 aaKnown RBP10.4□□□□□ -0.74
CLN3-261ENST00000637686 PNPLA8Q9NP80 782 aa10.4□□□□□ -0.74
CLN3-261ENST00000637686 SLC2A4RGQ9NR83 387 aa10.4□□□□□ -0.74
CLN3-261ENST00000637686 ZNHIT6Q9NWK9 470 aaKnown RBP10.4□□□□□ -0.74
CLN3-261ENST00000637686 GMIPQ9P107 970 aa10.4□□□□□ -0.74
CLN3-261ENST00000637686 ZMYM5Q9UJ78 669 aa10.4□□□□□ -0.74
CLN3-261ENST00000637686 DNAJC12Q9UKB3 198 aa10.4□□□□□ -0.74
CLN3-261ENST00000637686 AJAP1Q9UKB5 411 aaPredicted RBP10.4□□□□□ -0.74
CLN3-261ENST00000637686 TSPAN16Q9UKR8 245 aa10.4□□□□□ -0.74
CLN3-261ENST00000637686 KIAA1257Q9ULG3 409 aa10.4□□□□□ -0.74
CLN3-261ENST00000637686 CA14Q9ULX7 337 aa10.4□□□□□ -0.74
CLN3-261ENST00000637686 CNTN6Q9UQ52 1028 aa10.4□□□□□ -0.74
CLN3-261ENST00000637686 FHOD1Q9Y613 1164 aa10.4□□□□□ -0.74
CLN3-261ENST00000637686 OBSL1O75147 1896 aa10.4□□□□□ -0.75
CLN3-261ENST00000637686 ZNF638Q14966 1978 aaKnown RBP10.39□□□□□ -0.75
CLN3-261ENST00000637686 TECTAO75443 2155 aa10.39□□□□□ -0.75
CLN3-261ENST00000637686 ANAPC1Q9H1A4 1944 aa10.39□□□□□ -0.75
CLN3-261ENST00000637686 SSU72P8A0A1W2PR75 194 aa10.39□□□□□ -0.75
CLN3-261ENST00000637686 FAM92AA1XBS5 289 aa10.39□□□□□ -0.75
CLN3-261ENST00000637686 PRR33A8MZF0 331 aa10.39□□□□□ -0.75
CLN3-261ENST00000637686 F8VZ95 297 aa10.39□□□□□ -0.75
CLN3-261ENST00000637686 O00370 1275 aa10.39□□□□□ -0.75
CLN3-261ENST00000637686 ARHGAP6O43182 974 aa10.39□□□□□ -0.75
CLN3-261ENST00000637686 GFPT2O94808 682 aa10.39□□□□□ -0.75
CLN3-261ENST00000637686 PDGFBP01127 241 aaPredicted RBP10.39□□□□□ -0.75
CLN3-261ENST00000637686 CKMP06732 381 aa10.39□□□□□ -0.75
CLN3-261ENST00000637686 USP17L7P0C7H9 530 aa10.39□□□□□ -0.75
CLN3-261ENST00000637686 PSMC3P17980 439 aa10.39□□□□□ -0.75
CLN3-261ENST00000637686 BRD2P25440 801 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms